Identification of senescence-associated genes from daylily petals

Plant Molecular Biology

Volumn 40, Issue 2, 1999, Pages 237-248

  Panavas, Tadas ^a   Pikula, Agata ^b   Reid, Philip D ^b   Rubinstein, Bernard ^a   Walker, Elsbeth L ^a  

^a UNIVERSITY OF MASSACHUSETTS   (United States)

^b SMITH COLLEGE   (United States)

Author keywords

Abscisic acid; Flower; Hemerocallis; Petal senescence; Senescence associated genes

Indexed keywords

ALLENE OXIDE SYNTHASE; APOPTOSIS; ASPARTIC PROTEINASE; CYTOCHROME P450; PLANT DEVELOPMENT; PLANT GENETICS; SENESCENCE;

ABSCISIC ACID; AMINO ACID SEQUENCE; BLOTTING, SOUTHERN; DNA, COMPLEMENTARY; DNA, PLANT; GENE EXPRESSION; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; MOLECULAR SEQUENCE DATA; PLANT GROWTH REGULATORS; PLANTS; RNA, MESSENGER; RNA, PLANT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TISSUE DISTRIBUTION;

EID: 0033136360     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006146230602     Document Type: Article

References (65)

1. Akashi, T., Aoki, T., Takahashi, T., Kameya, N., Nakamura, I. and Ayabe, S. 1997. Cloning of cytochrome P450 cDNAs from cultured Glycyrrhiza echinata L. cells and their transcriptional activation by elicitor treatment. Plant Sci 126: 39-47.
2. Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
3. Asakura, T., Watanabe, H., Aba, K. and Arai, S. 1995. Rice aspartic proteinase, oryzasin, expressed during seed ripening and germination, has a gene organization distinct from those of animal and microbial aspartic proteinases. Eur. J. Biochem. 232: 77-83 (1995).
4. Bak, S., Kahn, R.A., Nielsen, H.L., Moller, B.L. and Halkier, B.A. 1998. Cloning of three A-type cytochromes P450, CYP71E1, CYP98, AND CYP99 from Sorgum bicolor (L.) Moench by a PCR approach and identification by expression in Escherichia coli of CYP71E1 as a multifunctional cytochrome P450 in the biosynthesis of the cyanogenic glucoside dhurrin. Plant Mol. Biol. 36: 393-405.
5. Baumgartner, B., Kende, H. and Matile, P. 1975. Ribonuclease in senescing morning glory. Plant Physiol. 55: 734-737.
6. Becker, W. and Apel, K. 1993. Difference in gene-expression between natural and artificial induced leaf senescence. Planta 189: 74-79.
7. Bieleski, R.L. and Reid, M.S. 1992. Physiological changes accompanying senescence in the ephemeral daylily flower. Plant Physiol. 98: 1042-1049.
8. Blank, A. and McKeon, T.A. 1989. Singe-strand-prefering nuclease activity in wheat leaves is increased in senescence and negatively photoregulated. Proc. Natl Acad. Sci. USA 86: 3169-3173.
9. Blank, A. and McKeon, T.A. 1991. Expression of three RNase activities during natural and dark-induced senescence of wheat leaves. Plant Physiol. 97: 1409-1413.
10. Brown, P.H. and Ho, T.D. 1987. Biochemical properties and hormonal regulation of barley nuclease. Eur. J. Biochem. 168: 357-364.
11. Buchanan-Wollaston, V. 1997. The molecular biology of leaf senescence. J. Exp. Bot. 48: 181-199.
12. Buchanan-Wollaston, V. and Ainsworth, C. 1997. Leaf senescence in Brassica napus: cloning of senescence related genes by subtractive hybridization. Plant Mol. Biol. 33: 821-834.
13. Cabello-Hurtado, F., Batard, Y., Salaun, J.P., Durst, F., Pinot, F. and Werck-Reichhart, D. 1998. Cloning, expression in yeast, and functional characterization of CYP81B1, a plant cytochrome P450 that catalyzes in-chain hydroxylation of fatty acids. J. Biol. Chem. 273: 7260-7267.
14. Clemens, S. and Kunst, L. 1997. Isolation of a Brassica napus cDNA (accession No. AF009563) encoding 3-ketoacyl-CoA synthase, a condensing enzyme involved in the biosynthesis of very long chain fatty acids in seeds. Plant Physiol. 115: 313-314.
15. Cordeiro, M.C., Xue, Z.-T., Pietrazak, M., Pais, S.M. and Brodelius, P.E. 1994. Isolation and characterization of a cDNA from flowers of Cynara cardunculus encoding cyprosin (an aspartic proteinase) and its use to study the organ-specific expression of cyprosin. Plant Mol. Biol. 24: 733-741.
16. Cushman, J.C. 1997. An expressed sequence tag database for the common ice plant, Mesembryanthemum crystallinum. Unpublished GenBank accession number AA887364.
17. D'Hondt, K., Bosch, D., Van Damme, J. and Goethals, M. 1993. An aspartic proteinase present in seeds cleaves Arabidopsis 2S albumin precursors in vitro. J. Biol. Chem. 269: 20884-20891.
18. D'Hondt, K., Stack, S., Gutteridge, S., Vandekerckhove, J., Krebbers, E. and Gal, S. 1997. Aspartic proteinase genes in Brassicaceae Arabidopsis thaliana and Brassica napus. Plant Mol. Biol. 33: 187-192.
19. Dellaporta, S.L. 1994. Plant DNA miniprep and microprep: Versions 2.1-2.3. In: Freeling, M. and Walbot, V. (Eds.), The Maize Handbook, Springer-Verlag, New York, pp. 522-525.
20. Finkelstein, R. and Somerville, C. 1989. Abscisic acid or high osmoticum promote accumulation of long-chain fatty acids in developing embryos of Brassica napus. Plant Sci. 61: 213-217.
21. Gottschalk, S., Waheed, A., Schmidt, B., Laidler, P., von Figura, K. 1989. Sequential processing of lysosomal acid phosphatase by a cytoplasmic thyol proteinase and a lysosomal aspartyl proteinase. EMBO J. 8: 3215-3219.
22. Green, P.J. 1994. The ribonucleases of higher plants. Ann. Rev. Plant Physiol. Plant Mol. Biol. 45: 421-445.
23. Griffiths, C.M., Hosken, S.E., Oliver, D., Chojecki, J. and Thomas, H. 1997. Sequencing, expression pattern and RFLP mapping of a senescence-enhanced cDNA with high homology to oryzain γ and aleurain. Plant Mol. Biol. 34: 815-821.
24. Guerrero, C., de la Calle, M., Reid, M.S. and Valpuesta, V. 1998. Analysis of the expression of two thiolprotease genes from daylily (Hemerocallis sp.) during flower senescence. Plant Mol. Biol. 36: 565-571.
25. Hiraiwa, N., Kondo, M., Nishimura, M. and Hara-Nishimura, I. 1997a. An aspartic endopeptidase is involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles of plants. Eur. J. Biochem. 246: 133-141.
26. Huang, Y.-F., Jordan, W.R., Wing, R.A. and Morgan, P.W. 1988. Gene expression induced by physical impedance in maize roots. Plant Mol. Biol. 37: 921-930.
27. Iwamatsu, A., Aoyama, H., Dibo, G., Tsunasawa, S. and Sakiyama, F. 1991. Amino acid sequence of nuclease S1 from Aspergillus oryzae. J. Biochem. 110: 151-158.
28. James, D.W.J., Lim, E., Keller, J., Plooy, I., Ralston, E. and Hugo, D.K. 1995. Direct tagging of the Arabidopsis FATTY ACID ELONGATION 1 (FAE1) gene with maize transposon Activator. Plant Cell 7: 309-319.
29. John, I., Hackett, R., Cooper, W., Drake, R., Farrell, A. and Grierson, D. 1997. Cloning and characterization of tomato leaf senescence-related cDNAs. Plant Mol. Biol. 33: 641-651.
30. Jones, E.W. 1991. Three proteolytic systems in the yeast Saccharomyces cerevisiae. J. Biol. Chem. 266: 7963-7966.
31. Karlin, S. and Altschul, S.F. 1993. Applications and statistics for multiple high-scoring segments in molecular sequences. Proc. Natl Acad. Sci. USA 90: 5873-5877.
32. Kazama, H., Tabata, N., Ohgi, K. and Irie, M. 1991. Primary structure of a nuclease (nuclease PA3) from a Penicillium sp. Agric. Biol. Chem. 55: 461-469.
33. Kende, H. and Hanson, A.D. 1976. Relationship between ethylene evolution and senescence in morning-glory flower tissue. Plant Physiol. 57: 523-527.
34. Laudert, D., Pfannschmidt, U., Lottspeich, F., Holländer-Czytko, H. and Weiler, E.W. 1996. Cloning, molecular and functional characterization of Arabidopsis thaliana allene oxide synthase (CYP 74), the first enzyme of the octadecanoid pathway to jasmonates. Plant Mol. Biol. 31: 323-335.
35. Lay-Yee, M., Stead, A.D. and Reid, M.S. 1992. Flower senescence in daylily (Hemerocallis). Physiol. Plant. 84: 308-314.
36. Lers, A., Khalchinski, A., Lomaniec, E., Burd, S. and Green, P.J. 1998. Senescence-induced RNases in tomato. Plant Mol. Biol. 36: 439-449 (1998).
37. Lessner, M.W., Lardizabal, K. and Metz, J.G. 1996. A jojoba β-ketoacyl-CoA synthase cDNA complements the canola fatty acid elongation mutation in transgenic plants. Plant Cell 8: 281-292.
38. Liang, P., Zhu, W., Zhang, X., Guo, Z., O'Connell, R.P., Averboukh, L., Wang, F. and Pardee, B. 1994. Differential display using one-base anchored oligo-dT primers. Nucl. Acids Res. 22: 5763-5764.
39. Lohman, K.M., Gan, S. and John, M.C. and Amasino, R.M. 1994. Molecular analysis of natural leaf senescence in Arabidopsis thaliana. Physiol. Plant. 92: 322-328.
40. Maekawa, K., Tsunasawa, S., Dibo, G. and Sakiyama, F. 1991. Primary structure of nuclease P1 from Penicilium citrinum. Eur. J. Biochem. 200: 651-661.
41. Meyer, R.C., Goldsbrough, P.B. and Woodson, W.R. 1991. An ethylene responsive flower senescence-related gene from carnation encodes a protein homologous to glutathione S-transferase. Plant Mol. Biol. 17: 277-281.
42. Nam, H.G. 1997. The molecular genetic analysis of leaf senescence. Curr. Opin. Biotechnol. 8: 200-207.
43. Nelson, D.R., Kamataki, T., Waxman, D.J., Guengrich, F.P., Estabrook, R.W., Feyereisen, R., Gonzales, F.J., Coon, M.J., Gunsalus, I.C., Gotoh, O., Okuda, K. and Nebert, D.W. 1993. The P450 superfamily: update on new sequences, gene maping, accession numbers, early trivial names of enzymes, and nomenclature. DNA Cell Biol. 12: 1-51.
44. Panavas, T. and Rubinstein, B. 1998. Oxidative events during programmed cell death of daylily (Hemerocallis hybrid) petals. Plant Sci. 133: 125-138.
45. Panavas, T., Reid, P.D. and Rubinstein, B. 1998a. Programmed cell death of daylily petals: activities of wall-based enzymes and effects of heat shock. Plant Physiol. Biochem. 36: 379-388.
46. Panavas, T., Walker, E.L., and Rubinstein, B. 1998b. The role of ABA in programmed cell death of daylily petals. J. Exp. Bot. 49: 1987-1997.
47. Rawlings, N.D. and Barrett, A.J. 1995. Families of aspartic peptidases, and those of unknown catalytic mechanism. Meth. Enzymol. 248: 105-120.
48. Robbins, T.P., Walker, E.L., Kermicle, J.L., Alleman, M. and Dellaporta, S.L. 1991. Meiotic instability of the R-r complex arising from displaced intragenic exchange and intrachromosomal rearrangement. Genetics 129: 271-283.
49. Runeberg-Roos, P., Kervinen, J., Kovaleva, V., Raikhel, N.V. and Gal, S. 1994. The aspartic proteinase of barley is a vacuolar enzyme that processes probarley lectin in vitro. Plant Physiol. 105: 321-329.
50. Sambrook, J., Fritsch, E.F. and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
51. Shutov, A.D. and Vaintraub, I.A. 1987. Degradation of storage proteins in germinating seeds. Phytochemistry 26: 1557-1566.
52. Smart, C.M. 1994. Gene expression during leaf senescence. New Phytol. 126: 419-448.
53. Smart, C.M., Hocken, S.E., Thomas, H., Greaves, J.A., Blair, E.G. and Schuch, W. 1995. The timing of maize leaf senescence and the characterization of senescence-related cDNAs. Physiol. Plant. 93: 673-682.
54. Song, W.C. and Brash, A.R. 1991. Purification of an allene oxide synthase and identification of the enzyme as a cytochrome P-450. Science 253: 781-784.
55. Stead, A.D. and van Doorn, W.G. 1994. Strategies of flower senescence: a review. In: Scott, R.J. and Stead, A.D. (Eds.), Molecular and Cellular Aspects of Plant Reproduction, Cambridge University Press, Cambridge, UK, pp. 215-238.
56. Stephenson, P.T. and Rubinstein, B. 1998. Characterization of proteolytic activity during senescence of daylily. Physiol. Plant. 104: 463-473.
57. Taylor, C.B., Bariola, P.A., DelCardayre, S.B., Raines, R.T. and Green, PJ.: RNS2: a senescence-associated RNase of Arabidopsis that diverged from the S-RNases before speciation. Proc. Natl Acad. Sci. USA 90: 5118-5122.
58. ten Have, A. and Woltering, E.J. 1997. Ethylene biosynthesis genes are differentially expressed during carnation (Dianthus caryophyllus L.) flower senescence. Plant Mol. Biol. 34: 89-97.
59. Thimann, K.V. 1980. The senescence of leaves. In: Thimann, K.V. (Ed.), Senescence in Plants, CRC Press, Boca Raton, FL, pp. 85-115.
60. Valpuesta, V., Lange, N.E., Guerrero, C. and Reid, M.S. 1995. Up-regulation of a cysteine protease accompanies the ethylene-insensitive senescence of daylily (Hemerocallis) flowers. Plant Mol. Biol. 28: 575-582.
61. van Doorn, W.G. and Stead, A.D. 1994. The physiology of petal senescence which is not initiated by ethylene. In: Scott, R.J. and Stead, A.D. (Eds.), Molecular and Cellular Aspects of Plant Reproduction, Cambridge University Press, Cambridge, UK, pp. 239-254.
62. Wiegand, R.C., Godson, G.N. and Radding, C.M. 1995. Specificity of the S1 nuclease from Aspergillus oryzae. J. Biol. Chem. 250: 8848-8855.
63. Wiemken-Gehrig, V., Wiemken, A. and Matile, P. 1974. Cell wall break down in wilting flowers of Ipomea tricolor Car. Planta 115: 297-307.
64. Weltering, E.J. and van Doorn, W. 1988. Role of ethylene in senescence of petals - morphological and taxonomical relationships. J. Exp. Bot. 39: 1605-1616.
65. Woodson, W.R. 1994. Molecular biology of flower senescence in carnation. In: Scott, R.J. and Stead, A.D. (Eds.), Molecular and Cellular Aspects of Plant Reproduction, Cambridge University Press, Cambridge, UK, pp. 255-267.