메뉴 건너뛰기




Volumn 401, Issue , 1999, Pages 139-148

Variability in bacterial community structure during upwelling in the coastal ocean

Author keywords

Marine bacteria; Phytoplankton; rRNA clonal library; Specific co occurrence; Upwelling

Indexed keywords

BACTERIUM DETECTION; LINKAGE GROUP; MARINE ENVIRONMENT; MICROBIAL POPULATION DYNAMICS; NUCLEOTIDE SEQUENCE;

EID: 0033133558     PISSN: 00188158     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1003734310515     Document Type: Article
Times cited : (40)

References (43)
  • 3
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., W. Ludwig, & K. H. Schleifer, 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 4
    • 0026364241 scopus 로고
    • The production of dissolved organic matter by phytoplankton and its importance to bacteria: Patterns across marine and freshwater systems
    • Baines, S. B. & M. L. Pace, 1991. The production of dissolved organic matter by phytoplankton and its importance to bacteria: Patterns across marine and freshwater systems. Limnol. Oceanogr. 36: 1078-1090.
    • (1991) Limnol. Oceanogr. , vol.36 , pp. 1078-1090
    • Baines, S.B.1    Pace, M.L.2
  • 5
    • 0028581116 scopus 로고
    • The shelf edge exchange processes experiment, SEEP-II: An introduction to hypotheses, results and conclusions
    • Biscaye, P. E., C. N. Flagg & P. G. Falkowski, 1994. The shelf edge exchange processes experiment, SEEP-II: an introduction to hypotheses, results and conclusions. Deep Sea Res. Part II, 41: 231-255.
    • (1994) Deep Sea Res. Part II , vol.41 , pp. 231-255
    • Biscaye, P.E.1    Flagg, C.N.2    Falkowski, P.G.3
  • 6
  • 8
    • 0024218962 scopus 로고
    • Major role of bacteria in biochemical fluxes in the ocean's interior
    • Cho, B. C. & F. Azam, 1988. Major role of bacteria in biochemical fluxes in the ocean's interior. Nature 332: 441-443.
    • (1988) Nature , vol.332 , pp. 441-443
    • Cho, B.C.1    Azam, F.2
  • 9
    • 0002381096 scopus 로고
    • Bacterial production in fresh and saltwater ecosystems: A cross-system overview
    • Cole, J. J., S. Findlay & M. Pace, 1988. Bacterial production in fresh and saltwater ecosystems: a cross-system overview. Mar. Ecol. Prog. Ser. 43: 1-10.
    • (1988) Mar. Ecol. Prog. Ser. , vol.43 , pp. 1-10
    • Cole, J.J.1    Findlay, S.2    Pace, M.3
  • 10
    • 0023948010 scopus 로고
    • High efficiency transformation of E. coli by high voltage electroporation
    • Dower, W., J. Miller & C. Ragsdale, 1988. High efficiency transformation of E. coli by high voltage electroporation. Nucl. Acids. Res. 16: 6127-6144.
    • (1988) Nucl. Acids. Res. , vol.16 , pp. 6127-6144
    • Dower, W.1    Miller, J.2    Ragsdale, C.3
  • 11
    • 0028594207 scopus 로고
    • The lateral flux of biogenic particles from the eastern North American continental margin to the North Atlantic Ocean
    • Falkowski, P. G., P. E. Biscaye & C. Sancetta, 1994. The lateral flux of biogenic particles from the eastern North American continental margin to the North Atlantic Ocean. Deep Sea Res. Part II, 41: 583-601.
    • (1994) Deep Sea Res. Part II , vol.41 , pp. 583-601
    • Falkowski, P.G.1    Biscaye, P.E.2    Sancetta, C.3
  • 13
    • 0027484760 scopus 로고
    • Phospholipid fatty acid composition, biomass, and activity of microbial communities from two soil types experimentally exposed to different heavy metals
    • Frostegard, A., A. Tunlid & E. Baath, 1993. Phospholipid fatty acid composition, biomass, and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl. envir. Microbiol. 59: 3605-3617.
    • (1993) Appl. Envir. Microbiol. , vol.59 , pp. 3605-3617
    • Frostegard, A.1    Tunlid, A.2    Baath, E.3
  • 14
    • 0018935706 scopus 로고
    • Bacterioplankton secondary production estimates for coastal waters of British Columbia, Antarctica, and California
    • Fuhrman, J. & F. Azam, 1980. Bacterioplankton secondary production estimates for coastal waters of British Columbia, Antarctica, and California. Appl. envir. Microbiol. 39: 1085-1095.
    • (1980) Appl. Envir. Microbiol. , vol.39 , pp. 1085-1095
    • Fuhrman, J.1    Azam, F.2
  • 15
    • 0001326192 scopus 로고
    • The Sulfur Cycle
    • Goldberg E., (ed.), John Wiley and Sons, New York
    • Goldhaber, M. & I. Kaplan, 1974. The Sulfur Cycle. In The Sea. Goldberg E., (ed.), John Wiley and Sons, New York: 569-655.
    • (1974) The Sea , pp. 569-655
    • Goldhaber, M.1    Kaplan, I.2
  • 16
    • 0029903395 scopus 로고    scopus 로고
    • Underwater observatory captures coastal upwelling events off New Jersey
    • Glenn, S. M., M. F. Crowley, D. B. Haidvogel & Y. H. Song, 1996. Underwater observatory captures coastal upwelling events off New Jersey. EOS 77: 233-236.
    • (1996) EOS , vol.77 , pp. 233-236
    • Glenn, S.M.1    Crowley, M.F.2    Haidvogel, D.B.3    Song, Y.H.4
  • 17
    • 0342940789 scopus 로고    scopus 로고
    • Numerical dominance of a group of bacteria in the alpha-subclass of the class Proteobacteria in coastal seawater
    • Gonzalez, J. & M. A. Moran, 1997. Numerical dominance of a group of bacteria in the alpha-subclass of the class Proteobacteria in coastal seawater. Appl. envir. Microbiol. 63: 4237-4242.
    • (1997) Appl. Envir. Microbiol. , vol.63 , pp. 4237-4242
    • Gonzalez, J.1    Moran, M.A.2
  • 18
    • 0020959710 scopus 로고
    • Studies on transformation of E. coli with plasmids
    • Hanahan, D, 1983. Studies on transformation of E. coli with plasmids. J. mol. Biol. 166: 557-580.
    • (1983) J. Mol. Biol. , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 19
    • 0031982528 scopus 로고    scopus 로고
    • Microbial evolution, diversity, and ecology: A decade of ribosomal RNA analysis of uncultivated microorganisms
    • Head, I. M., J. R. Saunders & R. W. Pickup, 1998. Microbial evolution, diversity, and ecology: A decade of ribosomal RNA analysis of uncultivated microorganisms. Micr. Ecol. 35: 1-21.
    • (1998) Micr. Ecol. , vol.35 , pp. 1-21
    • Head, I.M.1    Saunders, J.R.2    Pickup, R.W.3
  • 20
    • 0018936718 scopus 로고
    • Meteorological forcing and bottom water movement off the northern New Jersey coast
    • Hicks, D. C. & J. R. Miller, 1980. Meteorological forcing and bottom water movement off the northern New Jersey coast, Estuar. coast. Sci. II. 563-571.
    • (1980) Estuar. Coast. Sci. II , pp. 563-571
    • Hicks, D.C.1    Miller, J.R.2
  • 21
    • 0028983971 scopus 로고
    • Taxonomic diversity and metabolic activity of microbial communities in the water column of the central Baltic Sea
    • Hofle, M. G. & I. Brettar, 1995. Taxonomic diversity and metabolic activity of microbial communities in the water column of the central Baltic Sea. Limnol. Oceanogr. 40: 865-874.
    • (1995) Limnol. Oceanogr. , vol.40 , pp. 865-874
    • Hofle, M.G.1    Brettar, I.2
  • 22
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz, P., B. M. Goebel & N. R. Pace, 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J. Bact. 180: 4765-4774.
    • (1998) J. Bact. , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 23
    • 0028593070 scopus 로고
    • Modeling vertical oxygen and carbon flux during stratified spring and summer conditions on the continental shelf, Middle Atlantic Bight, eastern U.S.A.
    • Kemp, P. F., P. G. Falkowski & C. D. Wirick, 1994. Modeling vertical oxygen and carbon flux during stratified spring and summer conditions on the continental shelf, Middle Atlantic Bight, eastern U.S.A. Deep Sea Res. Part II, 41: 629.
    • (1994) Deep Sea Res. Part II , vol.41 , pp. 629
    • Kemp, P.F.1    Falkowski, P.G.2    Wirick, C.D.3
  • 24
    • 0027289343 scopus 로고
    • Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium
    • Kerkhof, L. & B. B Ward, 1993. Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium. Appl. envir. Microbiol. 59: 1303-1309.
    • (1993) Appl. Envir. Microbiol. , vol.59 , pp. 1303-1309
    • Kerkhof, L.1    Ward, B.B.2
  • 25
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Stackebrandt E. & M. Goodfellow (eds), John Wiley & Sons
    • Lane, D. J., 1991. 16S/23S rRNA sequencing, In Stackebrandt E. & M. Goodfellow (eds), Nucleic Acid Techniques in Bacterial Systematics. John Wiley & Sons: 115-175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 27
    • 0031838852 scopus 로고    scopus 로고
    • Contrasts between marine and freshwater bacterial community composition: Analyses of communities in Lake George and six other Adirondack lakes
    • Methe, B. A., W. D. Hiorns & J. P. Zehr, 1998. Contrasts between marine and freshwater bacterial community composition: Analyses of communities in Lake George and six other Adirondack lakes. Limnol. Oceanogr. 43: 368-374.
    • (1998) Limnol. Oceanogr. , vol.43 , pp. 368-374
    • Methe, B.A.1    Hiorns, W.D.2    Zehr, J.P.3
  • 28
    • 0001684954 scopus 로고
    • Algal pigment determinations in aquatic ecosystems: Analytical evaluations, applications, and recommendations
    • Millie, D., H. Paerl, J. Hurley & G. Kirkpatnck, 1993. Algal pigment determinations in aquatic ecosystems: Analytical evaluations, applications, and recommendations. Current Topic in Bot. Res. 1: 1-13.
    • (1993) Current Topic in Bot. Res. , vol.1 , pp. 1-13
    • Millie, D.1    Paerl, H.2    Hurley, J.3    Kirkpatnck, G.4
  • 29
    • 0027957393 scopus 로고
    • FastDNAml - A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood
    • Olsen, G. J., H. Matsuda, R. Hagstrom & R. Overbeek, 1994. FastDNAml - a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Computer Applications in the Biosciences 10: 41-48.
    • (1994) Computer Applications in the Biosciences , vol.10 , pp. 41-48
    • Olsen, G.J.1    Matsuda, H.2    Hagstrom, R.3    Overbeek, R.4
  • 30
    • 0031732243 scopus 로고    scopus 로고
    • Molecular characterization of a sulfate-reducing consortium which mineralizes benzene
    • Phelps, C., L. Kerkhof & L. Young, 1998. Molecular characterization of a sulfate-reducing consortium which mineralizes benzene. FEMS Micr. Ecol. 27: 269-279.
    • (1998) FEMS Micr. Ecol. , vol.27 , pp. 269-279
    • Phelps, C.1    Kerkhof, L.2    Young, L.3
  • 31
    • 0030765047 scopus 로고    scopus 로고
    • Dominant marine bacterioplankton species found among colony-forming bacteria
    • Pinhassi, J., U. Zweifel & A. Hagstrom, 1997. Dominant marine bacterioplankton species found among colony-forming bacteria. Appl. envir. Microbiol. 63: 3359-3366.
    • (1997) Appl. Envir. Microbiol. , vol.63 , pp. 3359-3366
    • Pinhassi, J.1    Zweifel, U.2    Hagstrom, A.3
  • 32
    • 0016279594 scopus 로고
    • The ocean's food web, a changing paradigm
    • Pomeroy, L. R., 1974. The ocean's food web, a changing paradigm. Bioscience 24: 499.
    • (1974) Bioscience , vol.24 , pp. 499
    • Pomeroy, L.R.1
  • 33
    • 0031395502 scopus 로고    scopus 로고
    • Phylogenetic diversity of marine coastal picoplankton 16S rRNA genes cloned from the continental shelf off Cape Hatteras, North Carolina
    • Rappe, M. S., P. F. Kemp, & S. J. Giovannoni, 1997. Phylogenetic diversity of marine coastal picoplankton 16S rRNA genes cloned from the continental shelf off Cape Hatteras, North Carolina. Limnol. Oceanogr. 42: 811-826.
    • (1997) Limnol. Oceanogr. , vol.42 , pp. 811-826
    • Rappe, M.S.1    Kemp, P.F.2    Giovannoni, S.J.3
  • 34
    • 84985788584 scopus 로고
    • Phytoplankton assemblages and their periodicity in stratifying lake systems
    • Reynolds, C. S., 1980. Phytoplankton assemblages and their periodicity in stratifying lake systems. Holarctic Ecol. 3: 141-159.
    • (1980) Holarctic Ecol. , vol.3 , pp. 141-159
    • Reynolds, C.S.1
  • 35
    • 0031736055 scopus 로고    scopus 로고
    • Assessing changes in microbial community structure during operation of an ammonia biofilter using molecular tools
    • Sakano, Y. & L. Kerkhof, 1998. Assessing changes in microbial community structure during operation of an ammonia biofilter using molecular tools. Appl. envir. Microbiol. 64: 4877-4882.
    • (1998) Appl. Envir. Microbiol. , vol.64 , pp. 4877-4882
    • Sakano, Y.1    Kerkhof, L.2
  • 36
    • 0030067991 scopus 로고    scopus 로고
    • Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
    • Suzuki, M. T. & S. J. Giovannoni, 1996. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. envir. Microbiol. 62: 625-30.
    • (1996) Appl. Envir. Microbiol. , vol.62 , pp. 625-630
    • Suzuki, M.T.1    Giovannoni, S.J.2
  • 38
    • 0030497690 scopus 로고    scopus 로고
    • Total bacterial diversity in soil and sediment communities - A review
    • Torsvik, V., R. Sorheim & J. Goksoyr, 1996. Total bacterial diversity in soil and sediment communities - A review. J. industrial Microbiol. 17: 170-178.
    • (1996) J. Industrial Microbiol. , vol.17 , pp. 170-178
    • Torsvik, V.1    Sorheim, R.2    Goksoyr, J.3
  • 39
    • 0001262938 scopus 로고
    • Biomass and Metabolic Activity of Heterotrophic Marine Bacteria
    • K. Marshall, (eds), New York
    • Van Es, F. & L. Meyer-Reil, 1982. Biomass and Metabolic Activity of Heterotrophic Marine Bacteria. In: K. Marshall, (eds), Advances in Microbial Ecology Plenum, New York: 111-169.
    • (1982) Advances in Microbial Ecology Plenum , pp. 111-169
    • Van Es, F.1    Meyer-Reil, L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.