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Volumn 401, Issue , 1999, Pages 113-130

The distribution and relative abundance of ammonia-oxidizing bacteria in lakes of the McMurdo Dry Valley, Antarctica

Author keywords

Ammonia oxidizing bacteria; amoA; Antarctic lakes; Family and species specific PCR detection of nitrifying bacteria; Nitrification

Indexed keywords

AMMONIA MONOOXYGENASE; ANTARCTICA; DISTRIBUTION; MARINE ENVIRONMENT; MICROORGANISM DETECTION; NITRIFICATION; NITROGEN TRANSFORMATION; POLYMERASE CHAIN REACTION; RIBOSOMAL RNA;

EID: 0033133478     PISSN: 00188158     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1003754830988     Document Type: Article
Times cited : (61)

References (58)
  • 1
    • 0028946084 scopus 로고
    • Phylogentic identification and in situ detedction of individual microbial cells without cultivation
    • Amann, R. I, W. Ludwig & K-H. Schleifer, 1995. Phylogentic identification and in situ detedction of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 2
    • 0027329330 scopus 로고
    • 2O production in the autotrophic nitrifier Nitrosomonas europaea and the heterotrophic nitrifier Alcaligenes faecalis
    • 2O production in the autotrophic nitrifier Nitrosomonas europaea and the heterotrophic nitrifier Alcaligenes faecalis. Appl. envir. Microbiol. 59: 3525-3533.
    • (1993) Appl. Envir. Microbiol. , vol.59 , pp. 3525-3533
    • Anderson, I.C.1    Poth, M.2    Homstead, J.3    Burdige, D.4
  • 4
    • 0001072224 scopus 로고
    • Lake Miers, South Victoria Land Antarctica
    • Bell, R. A. I., 1967. Lake Miers, South Victoria Land Antarctica. J. Geol. Geophys. 10: 540-556.
    • (1967) J. Geol. Geophys. , vol.10 , pp. 540-556
    • Bell, R.A.I.1
  • 5
    • 0001162758 scopus 로고
    • The cycling of nutrients in a closed-basin Antarctic lake: Lake Vanda
    • Canfield, D. E. & W. J. Greene, 1985. The cycling of nutrients in a closed-basin Antarctic lake: Lake Vanda. Biogeochem. 1: 233-256.
    • (1985) Biogeochem. , vol.1 , pp. 233-256
    • Canfield, D.E.1    Greene, W.J.2
  • 6
    • 0024251137 scopus 로고
    • Comparison of microbial dynamics in marine and freshwater sediments: Contrasts in anaerobic carbon catabolism
    • Capone, D. G. & R. P. Kiene, 1988. Comparison of microbial dynamics in marine and freshwater sediments: Contrasts in anaerobic carbon catabolism. Limnol. Oceanogr. 33: 725-749.
    • (1988) Limnol. Oceanogr. , vol.33 , pp. 725-749
    • Capone, D.G.1    Kiene, R.P.2
  • 8
    • 0023674363 scopus 로고
    • Aquatic nitrogen transformations at low oxygen concetrations
    • Downes, M. T., 1988. Aquatic nitrogen transformations at low oxygen concetrations. Appl. envir. Microbiol. 54: 172-175.
    • (1988) Appl. Envir. Microbiol. , vol.54 , pp. 172-175
    • Downes, M.T.1
  • 9
    • 0029032318 scopus 로고
    • Effect of genome size and rrn gene copy number of PCR amplification of 16S rRNA genes from a mixture of bacterial species
    • Farrelly, V., F. A. Rainey & E. Stackebrandt, 1995. Effect of genome size and rrn gene copy number of PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl. envir. Microbiol. 61: 2798-2801.
    • (1995) Appl. Envir. Microbiol. , vol.61 , pp. 2798-2801
    • Farrelly, V.1    Rainey, F.A.2    Stackebrandt, E.3
  • 10
    • 0242674614 scopus 로고
    • Probing marine systems with ribosomal RNAs
    • Giovannoni, S. J. & S. C. Craig, 1993. Probing marine systems with ribosomal RNAs. Oceanogr. 6: 95-104.
    • (1993) Oceanogr. , vol.6 , pp. 95-104
    • Giovannoni, S.J.1    Craig, S.C.2
  • 12
    • 0024191190 scopus 로고
    • The geochemistry of antarctic streams and their role in the evolution of four lakes of the McMurdo Dry Valleys
    • Green, W. J., M. P. Angle & K. E. Chave, 1988. The geochemistry of antarctic streams and their role in the evolution of four lakes of the McMurdo Dry Valleys. Geochim. Cosmochim. Acta 52: 1265-1274.
    • (1988) Geochim. Cosmochim. Acta , vol.52 , pp. 1265-1274
    • Green, W.J.1    Angle, M.P.2    Chave, K.E.3
  • 14
    • 0000022967 scopus 로고
    • Nitrification in Lakes
    • J. I. Prosser (ed.), IRL Press, Washington, D.C.
    • Hall, G. H., 1986. Nitrification in Lakes. In J. I. Prosser (ed.), Nitrification IRL Press, Washington, D.C. 127-156.
    • (1986) Nitrification , pp. 127-156
    • Hall, G.H.1
  • 15
    • 0027184336 scopus 로고
    • The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences
    • Head, I. M, W. D. Hiorns, T. Martin, A. J. McCarthy & J. R. Saunders, 1993. The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences. J. gen. Microbiol. 139: 1147-1153.
    • (1993) J. Gen. Microbiol. , vol.139 , pp. 1147-1153
    • Head, I.M.1    Hiorns, W.D.2    Martin, T.3    McCarthy, A.J.4    Saunders, J.R.5
  • 16
    • 84947373720 scopus 로고
    • Dating of geochemical events in Lake Bonney, Antarctica and their relation to glacial and climate changes
    • Hendy, C. H., A. T. Wilson, K. B. Popplewell & D. A. House, 1977. Dating of geochemical events in Lake Bonney, Antarctica and their relation to glacial and climate changes. N.Z. J. Geol. Geophys. 20: 1103-1122.
    • (1977) N.Z. J. Geol. Geophys. , vol.20 , pp. 1103-1122
    • Hendy, C.H.1    Wilson, A.T.2    Popplewell, K.B.3    House, D.A.4
  • 17
    • 0028791540 scopus 로고
    • Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
    • Holmes, A. B., A. Costello, M. E. Lidstrom & J. C. Murell, 1995. Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related. FEMS Microbiol. Lett. 132: 203-208.
    • (1995) FEMS Microbiol. Lett. , vol.132 , pp. 203-208
    • Holmes, A.B.1    Costello, A.2    Lidstrom, M.E.3    Murell, J.C.4
  • 19
    • 0001168385 scopus 로고
    • Light inhibition of nitrification in sea surface films
    • Horrigan, S. G., A. F. Carlucci & P. M. Williams, 1981. Light inhibition of nitrification in sea surface films. J. mar. Res. 39: 557-565.
    • (1981) J. Mar. Res. , vol.39 , pp. 557-565
    • Horrigan, S.G.1    Carlucci, A.F.2    Williams, P.M.3
  • 20
    • 0029669586 scopus 로고    scopus 로고
    • Comparative analysis of nitrfying bacteria associated with freshwater and marine aquaria
    • Hovanec, T. A. & E. F. DeLong, 1996. Comparative analysis of nitrfying bacteria associated with freshwater and marine aquaria. Appl. envir. Microbiol. 62: 2888-2896.
    • (1996) Appl. Envir. Microbiol. , vol.62 , pp. 2888-2896
    • Hovanec, T.A.1    DeLong, E.F.2
  • 21
    • 0028972895 scopus 로고
    • Influence of sulfide inhibition of nitrification on nitrogen regeneration in sediments
    • Joye, S. B. & J. T. Hollibaugh, 1995. Influence of sulfide inhibition of nitrification on nitrogen regeneration in sediments. Science 270: 623-625.
    • (1995) Science , vol.270 , pp. 623-625
    • Joye, S.B.1    Hollibaugh, J.T.2
  • 22
    • 0022169974 scopus 로고
    • The biogeochemistry of nitrous oxide: A review
    • Academic Press Inc. London
    • Kaplan, W. A. & S. C. Wofsy, 1985. The biogeochemistry of nitrous oxide: a review. In Advances in Aquatic Microbiology. Academic Press Inc. London. Vol. 3: 181-206.
    • (1985) Advances in Aquatic Microbiology , vol.3 , pp. 181-206
    • Kaplan, W.A.1    Wofsy, S.C.2
  • 23
    • 0027289343 scopus 로고
    • Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium
    • Kerkhof, L. & B. B. Ward, 1993. Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium. Appl. envir. Microbiol. 59: 1303-1309.
    • (1993) Appl. Envir. Microbiol. , vol.59 , pp. 1303-1309
    • Kerkhof, L.1    Ward, B.B.2
  • 25
    • 51249171800 scopus 로고
    • Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed-culture of strict barophilic bacteria
    • Liesack, W., H. Weyland & E. Stackenbrandt, 1991. Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed-culture of strict barophilic bacteria. Microb. Ecol. 21: 191-198.
    • (1991) Microb. Ecol. , vol.21 , pp. 191-198
    • Liesack, W.1    Weyland, H.2    Stackenbrandt, E.3
  • 26
    • 0002276603 scopus 로고
    • Spectral irradiance and bio-optical properties in perennially ice-covered lakes of the dry valleys (McMurdo Sound, Antarctica)
    • Elliot D. (ed.), Washington, D.C. AGU
    • Lizotte M. P. & J. C. Priscu, 1992. Spectral irradiance and bio-optical properties in perennially ice-covered lakes of the dry valleys (McMurdo Sound, Antarctica). In Elliot D. (ed.), Contribution to Antarctic Research III, Antarctic Research Series. 57: 1-14. Washington, D.C. AGU.
    • (1992) Contribution to Antarctic Research III, Antarctic Research Series , vol.57 , pp. 1-14
    • Lizotte, M.P.1    Priscu, J.C.2
  • 27
    • 0024873788 scopus 로고
    • Biogeochemical study of organic substances in Antarctic lakes
    • Matsomuto, G. I., 1989. Biogeochemical study of organic substances in Antarctic lakes. Hydrobiologia 172: 265-289.
    • (1989) Hydrobiologia , vol.172 , pp. 265-289
    • Matsomuto, G.I.1
  • 28
    • 0030014717 scopus 로고    scopus 로고
    • The gene encoding ammonia monooxygenase subunit A exists in three nearly identical copies in Nitrosospira sp. NpAV
    • Norton, J. M., J. M. Low & M. G. Klotz, 1996. The gene encoding ammonia monooxygenase subunit A exists in three nearly identical copies in Nitrosospira sp. NpAV FEMS Microbiol. Lett. 139: 181-188.
    • (1996) FEMS Microbiol. Lett. , vol.139 , pp. 181-188
    • Norton, J.M.1    Low, J.M.2    Klotz, M.G.3
  • 29
    • 0000612658 scopus 로고
    • Spectral downwelling irradiance in an Antarctic lake
    • Palmisano, A. A. C. & G. M. Simmons, 1987. Spectral downwelling irradiance in an Antarctic lake. Polar Biology 7: 145-151.
    • (1987) Polar Biology , vol.7 , pp. 145-151
    • Palmisano, A.A.C.1    Simmons, G.M.2
  • 32
    • 0021836750 scopus 로고
    • 2O production by Nitrosomonas europaea: An examination of nitrifier dentrification
    • 2O production by Nitrosomonas europaea: an examination of nitrifier dentrification. Appl. envir. Microbiol. 49: 1134-1141.
    • (1985) Appl. Envir. Microbiol. , vol.49 , pp. 1134-1141
    • Poth, M.1    Focht, D.D.2
  • 33
    • 0022229633 scopus 로고
    • Relationship among nitrogen uptake, ammonia oxidation and nitrous oxide concentration in the coastal waters of western Cook Strait, New Zealand
    • Priscu, J. C. & M. T. Downes, 1985. Relationship among nitrogen uptake, ammonia oxidation and nitrous oxide concentration in the coastal waters of western Cook Strait, New Zealand. Estuar. Coast. Shelf Sci. 20: 529-542.
    • (1985) Estuar. Coast. Shelf Sci. , vol.20 , pp. 529-542
    • Priscu, J.C.1    Downes, M.T.2
  • 34
    • 3142602175 scopus 로고
    • Water column transformations of nitrogen in Lake Bonney, a perennially ice-covered Antarctic lake
    • Priscu, J. C., B. B. Ward & M. T. Downes, 1993. Water column transformations of nitrogen in Lake Bonney, a perennially ice-covered Antarctic lake. Ant. J. U.S. 28: 237-239.
    • (1993) Ant. J. U.S. , vol.28 , pp. 237-239
    • Priscu, J.C.1    Ward, B.B.2    Downes, M.T.3
  • 35
    • 0030274783 scopus 로고    scopus 로고
    • Extreme supersaturation of nitrous oxide in a non-ventilated Antarctic lake
    • Priscu, J. C., M. T. Downes & C. P. McKay, 1996. Extreme supersaturation of nitrous oxide in a non-ventilated Antarctic lake. Limnol. Oceanogr. 41: 1544-1551.
    • (1996) Limnol. Oceanogr. , vol.41 , pp. 1544-1551
    • Priscu, J.C.1    Downes, M.T.2    McKay, C.P.3
  • 36
    • 0030814870 scopus 로고
    • The ammonia monooxygenae structural gene amoA as a functional marker: Molecular fine scale analysis of natural ammonia-oxidizng populations
    • Rotthauwe, J. H., K.-P. Witzel & W. Liesack, 1995. The ammonia monooxygenae structural gene amoA as a functional marker: molecular fine scale analysis of natural ammonia-oxidizng populations. Appl. envir. Microbiol. 63: 4704-4712.
    • (1995) Appl. Envir. Microbiol. , vol.63 , pp. 4704-4712
    • Rotthauwe, J.H.1    Witzel, K.-P.2    Liesack, W.3
  • 37
    • 84912752843 scopus 로고
    • Quantitative autecological study of microorganisms in soil by immunofluorescence
    • Schmidt, E. L., 1974. Quantitative autecological study of microorganisms in soil by immunofluorescence. Soil Sci. 118: 141-149.
    • (1974) Soil Sci. , vol.118 , pp. 141-149
    • Schmidt, E.L.1
  • 38
    • 0000831038 scopus 로고
    • Environmental regulators of microbial activity in continental Antarctic lakes
    • Vincent W. (ed.), Wiley-Liss, Inc.
    • Simmons, G. M., J. R Vestal & R. A. Wharton, 1993. Environmental regulators of microbial activity in continental Antarctic lakes. In Vincent W. (ed.), Antarctic Microbiology, Wiley-Liss, Inc. : 491-541.
    • (1993) Antarctic Microbiology , pp. 491-541
    • Simmons, G.M.1    Vestal, J.R.2    Wharton, R.A.3
  • 39
    • 0026360036 scopus 로고
    • Numbers, activities, and diversity of autotrophic ammonia-oxidizing bacteria in a freshwater, eutrophic lake sediment
    • Smorczewski, W. T. & E. L. Schmidt, 1991. Numbers, activities, and diversity of autotrophic ammonia-oxidizing bacteria in a freshwater, eutrophic lake sediment. Can. J. Microbiol. 37: 828-833.
    • (1991) Can. J. Microbiol. , vol.37 , pp. 828-833
    • Smorczewski, W.T.1    Schmidt, E.L.2
  • 40
    • 0342340102 scopus 로고
    • Kinetic response to perturbed marine nitrification systems
    • Snra, R. F. & A. Baggaley, 1975. Kinetic response to perturbed marine nitrification systems. J. Wat. Poll. Cont Fed. 47: 472-486.
    • (1975) J. Wat. Poll. Cont Fed. , vol.47 , pp. 472-486
    • Snra, R.F.1    Baggaley, A.2
  • 42
    • 0028079873 scopus 로고
    • Evolutionary relationships among ammonia- and nitrite oxidizing-bacteria
    • Teske, A., E. Alm, J. M. Regan, S. Toze, B. E. Rittmann & D. A. Stahl, 1994. Evolutionary relationships among ammonia- and nitrite oxidizing-bacteria. J. Bacteriol. 176: 6623-6630.
    • (1994) J. Bacteriol. , vol.176 , pp. 6623-6630
    • Teske, A.1    Alm, E.2    Regan, J.M.3    Toze, S.4    Rittmann, B.E.5    Stahl, D.A.6
  • 46
    • 0001239628 scopus 로고
    • Nitrous oxide cycling in Lake Vanda, Antarctica
    • Vincent, W., M. T. Downes & C. L. Vincent, 1981. Nitrous oxide cycling in Lake Vanda, Antarctica. Nature 292: 618-620.
    • (1981) Nature , vol.292 , pp. 618-620
    • Vincent, W.1    Downes, M.T.2    Vincent, C.L.3
  • 47
    • 0027329251 scopus 로고
    • Antarctic cyanobacteria - Light, nutrients and photosynthesis in the microbial mat environment
    • Vincent, W. F., R. W. Castenholz, M. T. Downes & C. Howard Williams, 1993. Antarctic cyanobacteria - light, nutrients and photosynthesis in the microbial mat environment. J. Phycol. 29: 745-755.
    • (1993) J. Phycol. , vol.29 , pp. 745-755
    • Vincent, W.F.1    Castenholz, R.W.2    Downes, M.T.3    Howard Williams, C.4
  • 48
    • 0027141218 scopus 로고
    • Community structure and pigment organisation of cyanobacteria-dominated microbial mats in Antarctica
    • Vincent, W. F., M. T. Downes, R. W. Castenholz & C. Howard Williams, 1993. Community structure and pigment organisation of cyanobacteria-dominated microbial mats in Antarctica. Eur. J. Phycol. 28: 213-221.
    • (1993) Eur. J. Phycol. , vol.28 , pp. 213-221
    • Vincent, W.F.1    Downes, M.T.2    Castenholz, R.W.3    Howard Williams, C.4
  • 49
    • 0020470471 scopus 로고
    • Factors controlling phytoplankton production in Lake Vanda (77 °S)
    • Vincent, W. F. & C. L. Vincent, 1982. Factors controlling phytoplankton production in Lake Vanda (77 °S). Can. J. Fish. aquat. Sci. 39: 1602-1609.
    • (1982) Can. J. Fish. Aquat. Sci. , vol.39 , pp. 1602-1609
    • Vincent, W.F.1    Vincent, C.L.2
  • 51
    • 0039492419 scopus 로고
    • Detection of ammonia-oxidizing bacteria of the beta-subclass proteobacteria in aquatic samples with the PCR
    • Voytek, M. A. & B. B. Ward, 1995. Detection of ammonia-oxidizing bacteria of the beta-subclass proteobacteria in aquatic samples with the PCR. Appl. envir. Microbiol. 56: 2430-2435.
    • (1995) Appl. Envir. Microbiol. , vol.56 , pp. 2430-2435
    • Voytek, M.A.1    Ward, B.B.2
  • 52
    • 84889184125 scopus 로고
    • 15N abundance in the dry valley area, south Victoria Land, Antarctica: Ecophysiological implications of microorganisms
    • 15N abundance in the dry valley area, south Victoria Land, Antarctica: Ecophysiological implications of microorganisms. Mem. natl. Inst. Polar Res. Spec. Issue Jpn. 32: 130-139.
    • (1984) Mem. Natl. Inst. Polar Res. Spec. Issue Jpn. , vol.32 , pp. 130-139
    • Wada, E.1    Imaizuma, R.2    Nakaya, S.3    Torii, T.4
  • 53
    • 0001079806 scopus 로고
    • Nitrification in marine environments
    • J. I. Prosser (ed.), IRL Press, Washington, D.C.
    • Ward, B. B., 1986. Nitrification in marine environments. In J. I. Prosser (ed.), Nitrification IRL Press, Washington, D.C. 157-184.
    • (1986) Nitrification , pp. 157-184
    • Ward, B.B.1
  • 54
    • 0021829405 scopus 로고
    • Marine ammonia- and nitrite-oxidizing bacteria: Serological diversity determined by immunofluorescence in culture and in the environment
    • Ward, B. B. & A. F. Carlucci, 1985. Marine ammonia- and nitrite-oxidizing bacteria: Serological diversity determined by immunofluorescence in culture and in the environment. Appl. envir. Microbiol. 50: 194-201.
    • (1985) Appl. Envir. Microbiol. , vol.50 , pp. 194-201
    • Ward, B.B.1    Carlucci, A.F.2
  • 55
    • 0018948750 scopus 로고
    • Immunofluorescent assay for the marine ammonia-oxidizing bacterium, Nitrosococcus oceanus
    • Ward, B. B. & M. J. Perry, 1980. Immunofluorescent assay for the marine ammonia-oxidizing bacterium, Nitrosococcus oceanus. Appl. envir. Microbiol. 39: 913-918.
    • (1980) Appl. Envir. Microbiol. , vol.39 , pp. 913-918
    • Ward, B.B.1    Perry, M.J.2
  • 56
    • 0030842812 scopus 로고    scopus 로고
    • Detection and characterization of denitrifying bacteria from a permanently ice-covered Antarctic lake
    • Ward, B. B., & J. C. Priscu, 1997. Detection and characterization of denitrifying bacteria from a permanently ice-covered Antarctic lake. Hydrobiologia
    • (1997) Hydrobiologia
    • Ward, B.B.1    Priscu, J.C.2
  • 58
    • 0006211786 scopus 로고
    • A review of the geochemistry and lake physics of the antarctic dry areas
    • L. McGinnis (ed.), Washington, D.C.
    • Wilson, A. T., 1981. A review of the geochemistry and lake physics of the antarctic dry areas. In L. McGinnis (ed.), Dry Valley Drilling Program, Antarctic Res. Ser. 33: 185-192. Washington, D.C.
    • (1981) Dry Valley Drilling Program, Antarctic Res. Ser. , vol.33 , pp. 185-192
    • Wilson, A.T.1


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