Genomic organization of the mouse gene for lung surfactant protein D

American Journal of Respiratory Cell and Molecular Biology

Volumn 20, Issue 5, 1999, Pages 953-963

  Lawson, Peter R ^b   Perkins, Vivienne C ^b   Holmskov, Uffe ^b   Reid, Kenneth B M ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

AMPHIBIA; AVES; BOVINAE; MAMMALIA; RODENTIA;

COMPLEMENTARY DNA; GLYCOPROTEIN; LUNG SURFACTANT; SURFACTANT PROTEIN D;

5' UNTRANSLATED REGION; ANIMAL; ARTICLE; CHROMOSOME MAP; DNA PROBE; GENETIC POLYMORPHISM; GENETICS; HUMAN; IMMUNOBLOTTING; LUNG; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; MOUSE; NUCLEOTIDE SEQUENCE; PROMOTER REGION; SEQUENCE HOMOLOGY;

5' UNTRANSLATED REGIONS; ANIMALS; BASE SEQUENCE; CHROMOSOME MAPPING; CLONING, MOLECULAR; DNA PROBES; DNA, COMPLEMENTARY; GLYCOPROTEINS; HUMANS; IMMUNOBLOTTING; LUNG; MICE; MOLECULAR SEQUENCE DATA; POLYMORPHISM, GENETIC; PROMOTER REGIONS (GENETICS); PULMONARY SURFACTANT-ASSOCIATED PROTEIN D; PULMONARY SURFACTANTS; SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 0033126694     PISSN: 10441549     EISSN: None     Source Type: Journal    
DOI: 10.1165/ajrcmb.20.5.3343     Document Type: Article

References (48)

1. Rooney, S. A., S. L. Young, and C. R. Mendelson. 1994. Molecular and cellular processing of lung surfactant. FASEB J. 8:957-967.
2. Wright, J. R. 1997. Immunomodulatory functions of surfactant. Physiol. Rev. 77:931-962.
3. Holmskov, U., R. Malhotra, R. B. Sim, and J. C. Jensenius. 1994. Collectins: collagenous C-type lectins of the innate immune defense system. Immunol. Today 15:67-74.
4. Medzhitov, R., and C. A. Janeway, Jr. 1997. Innate immunity: the virtues of a nonclonal system of recognition. Cell 91:295-298.
5. Thiel, S., T. Vorup Jensen, C. M. Stover, W. Schwaeble, S. B. Laursen, K. Poulsen, A. C. Willis, P. Eggleton, S. Hansen, U. Holmskov, K. B. Reid, and J. C. Jensenius, 1997. A second serine protease associated with mannan-binding lectin that activates complement. Nature 386:506-510.
6. Crouch, E. C., A. Persson, G. L. Griffin, D. Chang, and R. M. Senior. 1995. Interactions of pulmonary surfactant protein D (SP-D) with human blood leukocytes. Am. J. Respir. Cell Mol. Biol. 12:410-415.
7. Holmskov, U., P. Lawson, B. Teisner, I. Tornoe, A. C. Willis, C. Morgan, C. Koch, and K. B. Reid. 1997. Isolation and characterization of a new member of the scavenger receptor superfamily. glycoprotein-340 (gp-340), as a lung surfactant protein-D binding molecule. J. Biol. Chem. 272:13743-13749.
8. Pikaar, J. C., W. F. Voorhout, L. M. van Golde, J. Verhoef, J. A. Van Strijp, and J. F. van Iwaarden. 1995. Opsonic activities of surfactant proteins A and D in phagocytosis of gram-negative bacteria by alveolar macrophages. J. Infect. Dis. 172:481-489.
9. Voorhout, W. F., T. Veenendaal, Y. Kuroki, Y. Ogasawara, L. M. van Golde, and H. J. Geuze. 1992. Immunocytochemical localization of surfactant protein D (SP-D) in type II cells, Clara cells, and alveolar macrophages of rat lung. J. Histochem. Cytochem. 40:1589-1597.
10. Crouch, E., D. Parghi, S. F. Kuan, and A. Persson. 1992. Surfactant protein D; subcellular localization in nonciliated bronchiolar epithelial cells. Am. J. Physiol. 263:L60-L66.
11. LeVine, A. M., M. D. Bruno, K. M. Huelsman, G. F. Ross, J. A. Whitsett, and T. R. Korfhagen. 1997. Surfactant protein A-deficient mice are susceptible to group B streptococcal infection. J. Immunol. 158:4336-4340.
12. Korfhagen, T. R., S. W. Glasser, and B. R. Stripp. 1994. Regulation of gene expression in the lung. Curr. Opin. Pediatr. 6:255-261.
13. Rust, K., L. Bingle, W. Mariencheck, A. Persson, and E. C. Crouch. 1996. Characterization of the human surfactant protein D promoter: transcriptional regulation of SP-D gene expression by glucocorticoids. Am. J. Respir. Cell Mol. Biol. 14:121-130.
14. Mariencheck, W., and E. Crouch. 1994. Modulation of surfactant protein D expression by glucocorticoids in fetal rat lung. Am. J. Respir. Cell Mol. Biol. 10;419-429.
15. Hoover, R. R., and J. Floros, 1998. Organization of the human SP-A and SP-D loci at 10q22-q23: physical and radiation hybrid mapping reveal gene order and orientation. Am. J. Respir. Cell Mol. Biol. 18:353-362.
16. Sastry, K., G. A. Herman, L. Day, E. Deignan, G. Bruns, C. C. Morton, and R. A, Ezckowitz. 1989. The human mannose-binding protein gene: exon structure reveals its evolutionary relationship to a human pulmonary surfactant gene and localization to chromosome 10. J. Exp. Med. 170:1175-1189.
17. Motwani, M., R. A. White, N. Guo, L. L. Dowler, A. I. Tauber, and K. N. Sastry. 1995. Mouse surfactant protein-D: cDNA cloning, characterization, and gene localization to chromosome 14. J. Immunol. 155:5671-5677.
18. Sastry, R., J. S. Wang, D. C. Brown, R. A. Ezckowitz, A. T. Tauber, and K. N. Sastry. 1995. Characterization of murine mannose-binding protein genes Mb11 and Mb12 reveals features common to other collectin genes. Mamm. Genome 6:103-110.
19. Moore, K. J., M. A. D'Amore Bruno, T. R. Korfhagen, S. W. Glasser, J. A. Whitsett, N. A. Jenkins, and N. G. Copeland. 1992. Chromosomal localization of three pulmonary surfactant protein genes in the mouse. Genomics 12:388-393.
20. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
21. Crouch, F., K. Rust, R, Veile, H. Donis Keller, and L. Grosso. 1993. Genomic organization of human surfactant protein D (SP-D): SP-D is encoded on chromosome 10q22.2-23.1. J. Biol. Chem. 268:2976-2983.
22. Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
23. Frohman, M. A., M. K. Dush, and G. R. Martin. 1988. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc. Natl. Acad. Sci. USA 85:8998-9002.
24. Breen, M., I.. Deakin, B. Macdonald, S. Miller, R. Sibson, E. Tarttelin, P. Avner, F. Bourgade, J. L. Guenet, X. Montagutelli, C. Poirier, D. Simon, D. Tailor, M. Bishop, M. Kelly, F. Rysavy, S. Rastan, D. Norris, D. Shepherd, C. Abbott, A. Pilz, S. Hodge, I. Jackson, Y. Boyd, H. Blair, G. Maslen, J. A. Todd, P, W. Reed, J. Stoye, A. Ashworth, L. McCarthy, R. Cox, L. Schalkwyk, H. Lehrach, J. Klose, U. Gangadharan, and S. Brown (European Backcross Collaborative Group). 1994. Towards high resolution maps of the mouse and human genomes - a facility for ordering markers to 0.1 cM resolution. Hum. Mol. Genet. 3:621-627.
25. Smit, A. F. 1993. Identification of a new, abundant superfamily of mammalian LTR-transposons. Nucleic Acids Res. 21:1863-1872.
26. Kawasaki, N., N. Itoh, and T. Kawasaki. 1994. Gene organization and 5′-flanking region sequence of conglutinin: a C-type mammalian lectin containing a collagen-like domain. Biochem. Biophys. Res. Commun. 198: 597-604.
27. Breathnach, R., and P. Chambon. 1981. Organization and expression of eucaryote split genes coding for proteins. Annu. Rev. Biochem. 50:344-383.
28. Suh, E., L. Chen, J. Taylor, and P. G. Traber. 1994. A homeodomain protein related to caudal regulates intestine-specific gene transcription. Mol. Cell Biol. 14:7340-7351.
29. Overdier, D. G., A. Porcella, and R. H. Costa. 1994. The DNA-binding specificity of the hepatocyte nuclear factor 3/forkhead domain is influenced by amino-acid residues adjacent to the recognition helix. Mol. Cell. Biol. 14:2755-2766.
30. Bohinski, R. J., R. Di Lauro, and J. A. Whitsett. 1994. The lung-specific surfactant protein B gene promoter is a target for thyroid transcription factor I and hepatocyte nuclear factor 3, indicating common factors for organ-specific gene expression along the foregut axis. Mol Cell. Biol. 14:5671-5681.
31. Yan, C., Z. Sever, and J. A. Whitsett. 1995. Upstream enhancer activity in the human surfactant protein B gene is mediated by thyroid transcription factor I. J. Biol. Chem. 270:24852-24857.
32. Brown Augsburger, P., D. Chang, K. Rust, and E. C. Crouch. 1996. Biosynthesis of surfactant protein D. Contributions of conserved NH2-terminal cysteine residues and collagen helix formation to assembly and secretion. J. Biol. Chem. 271:18912-18919.
33. Hoppe, H. J., P. N. Barlow, and K. B. Reid. 1994. A parallel three stranded alpha-helical bundle at the nucleation site of collagen triple-helix formation. FEBS Lett. 344:191-195.
34. Exposito, J. Y., and R. Garrone. 1990. Characterization of a fibrillar collagen gene in sponges reveals the early evolutionary appearance of two collagen gene families. Proc. Natl. Acad. Sci. USA 87:6669-6673.
35. Endo, Y., Y. Sato, M. Matsushita, and T. Fujita. 1996. Cloning and characterization of the human lectin P35 gene and its related gene. Genotics 36:515-521.
36. Exposito, J. Y., D. Le Guellec, Q. Lu, and R. Garronc. 1991. Short chain collagens in sponges are encoded by a family of closely related genes. J. Biol. Chem. 266:21923-21928.
37. Patthy, L. 1987. Intron-dependent evolution: preferred types of exons and introns. FEBS Lett. 214:1-7.
38. Drickamer, K., and V. McCreary. 1987. Exon structure of a mannose-binding protein gene reflects its evolutionary relationship to the asialoglycoprotein receptor and nonfibrillar collagens. J. Biol. Chem. 262:2582-2589.
39. Kashi, Y., D. King, and M. Soller. 1997. Simple sequence repeats as a source of quantitative genetic variation. Trends Genet. 13:74-78.
40. Kelly, R., M. Gibbs, A. Collick, and A. J. Jeffreys. 1991. Spontaneous mutation at the hypervariable mouse minisatellite locus Ms6-hm: flanking DNA sequence and analysis of germline and early somatic mutation events, Proc. R. Soc. Lond. B. Biol. Sci. 245:235-245.
41. Sullivan, L. C., C. B. Daniels, I. D. Phillips, S. Orgeig, and J. A. Whitsett. 1998. Conservation of surfactant protein A: evidence for a single origin for vertebrate pulmonary surfactant. J. Mol. Evol. 46:131-138.
42. Faisst, S., and S. Meyer. 1992. Compilation of vertebrate-encoded transcription factors. Nucleic Acids Res. 20:3-26.
43. Hellqvist, M., M. Mahlapuu, L. Samuelsson, S. Enerback, and P. Carlsson. 1996. Differential activation of lung-specific genes by two forkhead proteins, FREAC-1 and FREAC-2. J. Biol. Chem. 271:4482-4490.
44. Bruno, M. D., R. J. Bohinski, K. M. Huclsman, J. A. Whitsett, and T. R. Korfhagen. 1995.Lung cell-specific expression of the murine surfactant protein A (SP-A) gene is mediated by interactions between the SP-A promoter and thyroid transcription factor-1. J. Biol. Chem. 270:6531-6536 [published erratum appears in J. Biol. Chem. 270(27): 16482].
45. Kelly, S. E., C. J. Bachurski, M. S. Burhans, and S. W. Glasser. 1996. Transcription of the lung-specific surfactant protein C gene is mediated by thyroid transcription factor 1. J. Biol. Chem. 271:6881-6888.
46. Toonen, R. F., S. Gowan, and C. D. Bingle. 1996. The lung enriched transcription factor TTF-1 and the ubiquitously expressed proteins Sp1 and Sp3 interact with elements located in the minimal promoter of the rat Clara cell secretory protein gene. Biochem. J. 316:467-473.
47. Gao, E., J. L. Alcorn, and C. R. Mendelson. 1993. Identification of enhancers in the 5′-flanking region of the rabbit surfactant protein A (SP-A) gene and characterization of their binding proteins. J. Biol. Chem. 268:19697-19709.
48. McIntosh, J. C., A. H. Swyers, J. H. Fisher, and J. R. Wright. 1996. Surfactant proteins A and D increase in response to intratracheal lipopolysaccharide. Am. J. Respir. Cell Mol. Biol. 15:509-519.