-
1
-
-
0027385998
-
A fast algorithm for the optimal alignment of three strings
-
L. Allison, A fast algorithm for the optimal alignment of three strings, J. Theoret. Biol. 164 (1993) 261-269.
-
(1993)
J. Theoret. Biol.
, vol.164
, pp. 261-269
-
-
Allison, L.1
-
2
-
-
0027158655
-
Normalization of affine gap costs used in optimal sequence alignment
-
L. Allison, Normalization of affine gap costs used in optimal sequence alignment, J. Theoret. Biol. 161 (1993) 263-269.
-
(1993)
J. Theoret. Biol.
, vol.161
, pp. 263-269
-
-
Allison, L.1
-
3
-
-
0022899010
-
Optimal sequence alignments using affine gap costs
-
S. Altschul, B. Erickson, Optimal sequence alignments using affine gap costs, Bull. Math. Biol. 48 (1986) 606-616.
-
(1986)
Bull. Math. Biol.
, vol.48
, pp. 606-616
-
-
Altschul, S.1
Erickson, B.2
-
4
-
-
0020484488
-
An improved algorithm for matching biological sequences
-
O. Gotoh, An improved algorithm for matching biological sequences, J. Molecular Biol. 162 (1982).
-
(1982)
J. Molecular Biol.
, vol.162
-
-
Gotoh, O.1
-
5
-
-
0023044227
-
Alignment of three biological sequences with an efficient traceback procedure
-
O. Gotoh, Alignment of three biological sequences with an efficient traceback procedure, J. Theoret. Biol. 121 (1986) 327-337.
-
(1986)
J. Theoret. Biol.
, vol.121
, pp. 327-337
-
-
Gotoh, O.1
-
6
-
-
0023305876
-
Pattern matching of biological sequences with limited storage
-
O. Gotoh, Pattern matching of biological sequences with limited storage, CABIOS 3 (1987) 17-20.
-
(1987)
CABIOS
, vol.3
, pp. 17-20
-
-
Gotoh, O.1
-
7
-
-
0030963555
-
Reduced space sequence alignment
-
J. Grice, R. Hughey, D. Speck, Reduced space sequence alignment, CABIOS 13 (1) (1997) 45-53.
-
(1997)
CABIOS
, vol.13
, Issue.1
, pp. 45-53
-
-
Grice, J.1
Hughey, R.2
Speck, D.3
-
8
-
-
0016518550
-
A linear space algorithm for computing maximal common subsequences
-
D. Hirschberg, A linear space algorithm for computing maximal common subsequences, Comm. ACM 18 (6) (1975) 341-343.
-
(1975)
Comm. ACM
, vol.18
, Issue.6
, pp. 341-343
-
-
Hirschberg, D.1
-
9
-
-
0003164225
-
Serial computations of Levenshtein distances
-
A. Apostolico, Z. Galil (Eds.), Oxford University Press
-
D. Hirschberg, Serial computations of Levenshtein distances, in: A. Apostolico, Z. Galil (Eds.), Pattern Matching Algorithms, Oxford University Press, 1997, pp. 123-141.
-
Pattern Matching Algorithms
, vol.1997
, pp. 123-141
-
-
Hirschberg, D.1
-
10
-
-
0001116877
-
Binary codes capable of correcting deletions, insertions and reversals
-
V.I. Levenshtein, Binary codes capable of correcting deletions, insertions and reversals, Soviet Phys. Dokl. 10 (8) (1966) 707-710.
-
(1966)
Soviet Phys. Dokl.
, vol.10
, Issue.8
, pp. 707-710
-
-
Levenshtein, V.I.1
-
11
-
-
0024236865
-
Sequence comparison with concave weighting functions
-
W. Miller, E.W. Myers, Sequence comparison with concave weighting functions, Bull. Math. Biol. 50 (2) (1988) 97-120.
-
(1988)
Bull. Math. Biol.
, vol.50
, Issue.2
, pp. 97-120
-
-
Miller, W.1
Myers, E.W.2
-
12
-
-
0023012946
-
An O(nd) difference algorithm and its variations
-
E.W. Myers, An O(nd) difference algorithm and its variations, Algorithmica 1 (1986) 251-266.
-
(1986)
Algorithmica
, vol.1
, pp. 251-266
-
-
Myers, E.W.1
-
13
-
-
0023984847
-
Optimal alignments in linear space
-
E.W. Myers, W. Miller, Optimal alignments in linear space, CABIOS 4 (1) (1988) 11-17.
-
(1988)
CABIOS
, vol.4
, Issue.1
, pp. 11-17
-
-
Myers, E.W.1
Miller, W.2
-
14
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
S.B. Needleman, C.D. Wunsch, A general method applicable to the search for similarities in the amino acid sequence of two proteins, J. Molecular Biol. 48 (1970) 443-453.
-
(1970)
J. Molecular Biol.
, vol.48
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
15
-
-
0000821965
-
On the theory and computation of evolutionary distances
-
P.H. Sellers, On the theory and computation of evolutionary distances, SIAM J. Appl. Math. 26 (4) (1974) 787-793.
-
(1974)
SIAM J. Appl. Math.
, vol.26
, Issue.4
, pp. 787-793
-
-
Sellers, P.H.1
-
16
-
-
0021759994
-
A fast homology program for aligning biological sequences
-
P. Taylor, A fast homology program for aligning biological sequences, Nucleic Acids Res. 12 (1984) 447-455.
-
(1984)
Nucleic Acids Res.
, vol.12
, pp. 447-455
-
-
Taylor, P.1
-
18
-
-
84983986619
-
On approximate string matching
-
E. Ukkonen, On approximate string matching, Found. Comput. Theory 158 (1983) 487-495.
-
(1983)
Found. Comput. Theory
, vol.158
, pp. 487-495
-
-
Ukkonen, E.1
-
19
-
-
0022263934
-
Optimal alignments of biological sequences on a microcomputer
-
K. Watanabe, Y. Urano, T. Tamaoki, Optimal alignments of biological sequences on a microcomputer, CABIOS 1 (1985) 83-87.
-
(1985)
CABIOS
, vol.1
, pp. 83-87
-
-
Watanabe, K.1
Urano, Y.2
Tamaoki, T.3
-
20
-
-
0002650819
-
Fast string alignment with linear indel costs
-
Monash University, Department of Computer Science, Clayton, Vic., Australia
-
C.N. Yee, L. Allison, Fast string alignment with linear indel costs, Technical Report 92/165, Monash University, Department of Computer Science, Clayton, Vic., Australia, 1992.
-
(1992)
Technical Report
, vol.92-165
-
-
Yee, C.N.1
Allison, L.2
|