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Volumn 46, Issue 2, 1999, Pages 206-216

Characterization of the Euplotes crassus macronuclear rDNA and its potential as a DNA transformation vehicle

Author keywords

Anisomycin resistance; Microinjection

Indexed keywords

GENE TRANSFER; RIBOSOMAL DNA;

EID: 0033105442     PISSN: 10665234     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1550-7408.1999.tb04605.x     Document Type: Article
Times cited : (7)

References (48)
  • 1
    • 0026699541 scopus 로고
    • A broad molecular phylogeny of ciliates: Identification of major evolutionary trends and radiations within the phylum
    • Baroin-Tourancheau, A., Delgado, P. Perasso, R. & Adoutte, A. 1992. A broad molecular phylogeny of ciliates: identification of major evolutionary trends and radiations within the phylum. Proc. Natl. Acad. Sci. USA., 89:9764-9768.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 9764-9768
    • Baroin-Tourancheau, A.1    Delgado, P.2    Perasso, R.3    Adoutte, A.4
  • 2
    • 0030679564 scopus 로고    scopus 로고
    • Regulatory sequences for the amplification and replication of the ribosomal DNA minichromosome in Tetrahymena thermophila
    • Blomberg, P., Randolph, C., Yao, C. H. & Yao, M. C. 1997. Regulatory sequences for the amplification and replication of the ribosomal DNA minichromosome in Tetrahymena thermophila. Mol. Cell. Biol., 17:7237-7247.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 7237-7247
    • Blomberg, P.1    Randolph, C.2    Yao, C.H.3    Yao, M.C.4
  • 3
    • 0022369729 scopus 로고
    • A high affinity topoisomerase I binding sequence is clustered at DNAase I hypersensitive sites in Tetrahymena R-chromatin
    • Bonven, B. J., Gocke, E. & Westergaard, O. 1985. A high affinity topoisomerase I binding sequence is clustered at DNAase I hypersensitive sites in Tetrahymena R-chromatin. Cell, 41:541-551.
    • (1985) Cell , vol.41 , pp. 541-551
    • Bonven, B.J.1    Gocke, E.2    Westergaard, O.3
  • 5
    • 0028866097 scopus 로고
    • An intramolecular recombination mechanism for the formation of the rRNA gene palindrome of Tetrahymena thermophila
    • Butler, D. K., Yasuda, L. E. & Yao, M. C. 1995. An intramolecular recombination mechanism for the formation of the rRNA gene palindrome of Tetrahymena thermophila. Mol. Cell. Biol., 15:7117-7126.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 7117-7126
    • Butler, D.K.1    Yasuda, L.E.2    Yao, M.C.3
  • 6
    • 0019887426 scopus 로고
    • Replication of the extrachromosomal ribosomal RNA genes of Tetrahymena thermophila
    • Cech, T. R. & Brehm, S. L. 1981. Replication of the extrachromosomal ribosomal RNA genes of Tetrahymena thermophila. Nucleic Acids Res, 14:3531-3543.
    • (1981) Nucleic Acids Res , vol.14 , pp. 3531-3543
    • Cech, T.R.1    Brehm, S.L.2
  • 7
    • 0022423269 scopus 로고
    • Conserved arrangements of repeated DNA sequences in non-transcribed spacers of ciliate ribosomal RNA genes: Evidence for molecular coevolution
    • Challoner, P. B., Amin, A. A., Pearlman, R. E. & Blackburn, E. H. 1985. Conserved arrangements of repeated DNA sequences in non-transcribed spacers of ciliate ribosomal RNA genes: evidence for molecular coevolution. Nucleic Acids Res., 13:2661-2680.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 2661-2680
    • Challoner, P.B.1    Amin, A.A.2    Pearlman, R.E.3    Blackburn, E.H.4
  • 8
    • 0023109138 scopus 로고
    • Mapping of sequence-specific chromatin proteins by a novel method: Topoisomerase I on Tetrahymena ribosomal chromatin
    • Christiansen, K., Bonven, B. J. & Westergaard, O. 1987. Mapping of sequence-specific chromatin proteins by a novel method: topoisomerase I on Tetrahymena ribosomal chromatin. J. Mol. Biol., 193:517-525.
    • (1987) J. Mol. Biol. , vol.193 , pp. 517-525
    • Christiansen, K.1    Bonven, B.J.2    Westergaard, O.3
  • 9
    • 0021760092 scopus 로고
    • A comprehensive set of sequence analysis programs for the VAX
    • Devereux, J., Haeberli, P. & Smithies, O. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res., 12: 387-395.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 387-395
    • Devereux, J.1    Haeberli, P.2    Smithies, O.3
  • 10
    • 0020480155 scopus 로고
    • The nucleotide sequence at the transcription termination site of the ribosomal RNA gene in Tetrahymena thermophila
    • Din, N., Engberg, J. & Gall, J. G. 1982. The nucleotide sequence at the transcription termination site of the ribosomal RNA gene in Tetrahymena thermophila. Nucleic Acids Res., 10:1503-1513.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 1503-1513
    • Din, N.1    Engberg, J.2    Gall, J.G.3
  • 11
    • 0021970492 scopus 로고
    • The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata
    • Elwood, H. J., Olsen, G. J. & Sogin, M. L. 1985. The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata. Mol. Biol. Evol., 2:399-410.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 399-410
    • Elwood, H.J.1    Olsen, G.J.2    Sogin, M.L.3
  • 12
    • 0025644196 scopus 로고
    • Complete sequence of the extrachromosomal rDNA molecule from the ciliate Tetrahymena thermophila strain B1868VII
    • Engberg, J. & Nielsen, H. 1990. Complete sequence of the extrachromosomal rDNA molecule from the ciliate Tetrahymena thermophila strain B1868VII. Nucleic Acids Res., 18:6915-6919.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6915-6919
    • Engberg, J.1    Nielsen, H.2
  • 13
    • 0028823799 scopus 로고
    • DNA rearrangements in Euplotes crassus coincide with discrete periods of DNA replication during the polytene chromosome stage of macronuclear development
    • Frels, J. S. & Jahn, C. L. 1995. DNA rearrangements in Euplotes crassus coincide with discrete periods of DNA replication during the polytene chromosome stage of macronuclear development. Mol. Cell. Biol., 15:6488-6495.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 6488-6495
    • Frels, J.S.1    Jahn, C.L.2
  • 14
    • 84985154245 scopus 로고
    • Morphometric variations in the hypotrich ciliate genus Euplotes
    • Gates, M. 1978. Morphometric variations in the hypotrich ciliate genus Euplotes. J. Protozool., 25:338-350.
    • (1978) J. Protozool. , vol.25 , pp. 338-350
    • Gates, M.1
  • 15
    • 0028300548 scopus 로고
    • Characterization of transcription initiation, translation initiation, and poly(A) addition sites in the gene-sized macronuclear DNA molecules of Euplotes
    • Ghosh, S., Jaraczewski, J. W., Klobutcher, L. A. & Jahn, C. L. 1994. Characterization of transcription initiation, translation initiation, and poly(A) addition sites in the gene-sized macronuclear DNA molecules of Euplotes. Nucleic Acids Res., 22:214-221.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 214-221
    • Ghosh, S.1    Jaraczewski, J.W.2    Klobutcher, L.A.3    Jahn, C.L.4
  • 16
    • 0024120558 scopus 로고
    • Autonomous replication and addition of telomerelike sequences to DNA microinjected into Paramecium tetraurelia macronuclei
    • Gilley, D., Preer, J. R., Jr., Aufderheide, K. J. & Polisky, B. 1988. Autonomous replication and addition of telomerelike sequences to DNA microinjected into Paramecium tetraurelia macronuclei. Mol. Cell. Biol., 8:4765-4772.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 4765-4772
    • Gilley, D.1    Preer J.R., Jr.2    Aufderheide, K.J.3    Polisky, B.4
  • 17
    • 0025351399 scopus 로고
    • A programmed site-specific DNA rearrangement in Tetrahymena thermophila requires flanking polypurine tracts
    • Godiska, R. & Yao, M. C. 1990. A programmed site-specific DNA rearrangement in Tetrahymena thermophila requires flanking polypurine tracts. Cell, 61:1237-1246.
    • (1990) Cell , vol.61 , pp. 1237-1246
    • Godiska, R.1    Yao, M.C.2
  • 18
    • 0027135554 scopus 로고
    • A distant 10-bp sequence specifies the boundaries of a programmed DNA deletion in Tetrahymena
    • Godiska, R., James, C. & Yao, M. C. 1993. A distant 10-bp sequence specifies the boundaries of a programmed DNA deletion in Tetrahymena. Genes & Dev., 7:2357-2365.
    • (1993) Genes & Dev. , vol.7 , pp. 2357-2365
    • Godiska, R.1    James, C.2    Yao, M.C.3
  • 19
    • 0027049424 scopus 로고
    • A simplified ribonuclease protection assay
    • Hod, Y. 1992. A simplified ribonuclease protection assay. Biotechniques, 13:852-853.
    • (1992) Biotechniques , vol.13 , pp. 852-853
    • Hod, Y.1
  • 20
    • 0024803284 scopus 로고
    • Developmentally coordinated en masse excision of a highly repetitive element in E. crassus
    • Jahn, C. L., Krikau, M. F. & Shyman, S. 1989. Developmentally coordinated en masse excision of a highly repetitive element in E. crassus. Cell, 59:1009-1018.
    • (1989) Cell , vol.59 , pp. 1009-1018
    • Jahn, C.L.1    Krikau, M.F.2    Shyman, S.3
  • 21
    • 0028593845 scopus 로고
    • Sequence of the macronuclear DNA encoding large subunit ribosomal protein 29 (L29) in Euplotes crassus and cycloheximide sensitivity
    • Jahn, C. L., Erbeznik, M., Jaraczewski, J. W., Melek, M. & Shippen, D. E. 1994. Sequence of the macronuclear DNA encoding large subunit ribosomal protein 29 (L29) in Euplotes crassus and cycloheximide sensitivity. Gene, 151:231-235.
    • (1994) Gene , vol.151 , pp. 231-235
    • Jahn, C.L.1    Erbeznik, M.2    Jaraczewski, J.W.3    Melek, M.4    Shippen, D.E.5
  • 22
    • 0027942714 scopus 로고
    • Developmentally regulated, low abundance Tec element transcripts in Euplotes crassus - Implications for DNA elimination and transposition
    • Jaraczewski, J. W., Frels, J. S. & Jahn, C. L. 1994. Developmentally regulated, low abundance Tec element transcripts in Euplotes crassus - implications for DNA elimination and transposition. Nucleic Acids Res., 22:4535-4542.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4535-4542
    • Jaraczewski, J.W.1    Frels, J.S.2    Jahn, C.L.3
  • 23
    • 0026636977 scopus 로고
    • Bacteriophage lambda DNA fragments replicate in the Paramecium macronucleus: Absence of active copy number control
    • Kim, C. S., Preer, J. R., Jr. & Polisky, B. 1992. Bacteriophage lambda DNA fragments replicate in the Paramecium macronucleus: absence of active copy number control. Dev. Genet., 13:97-102.
    • (1992) Dev. Genet. , vol.13 , pp. 97-102
    • Kim, C.S.1    Preer J.R., Jr.2    Polisky, B.3
  • 24
    • 0026236561 scopus 로고
    • Developmentally controlled genomic rearrangements in ciliated protozoa
    • Klobutcher, L. A. & Jahn, C. L. 1991. Developmentally controlled genomic rearrangements in ciliated protozoa. Curr. Opin. Gen. Devel., 1:397-403.
    • (1991) Curr. Opin. Gen. Devel. , vol.1 , pp. 397-403
    • Klobutcher, L.A.1    Jahn, C.L.2
  • 25
    • 0023875970 scopus 로고
    • Using mini-prep plasmid DNA for double-stranded templates with Sequenase
    • Kraft, R., Tardiff, J., Krauter, K. S. & Leinwand, L. A. 1988. Using mini-prep plasmid DNA for double-stranded templates with Sequenase. Biotechniques, 6:544-547.
    • (1988) Biotechniques , vol.6 , pp. 544-547
    • Kraft, R.1    Tardiff, J.2    Krauter, K.S.3    Leinwand, L.A.4
  • 26
    • 2642699794 scopus 로고
    • Rapid and efficient site-specific mutagenesis without phenotypic selection
    • Kunkel, T. A. 1985. Rapid and efficient site-specific mutagenesis without phenotypic selection. Proc. Natl. Acad. Sci. USA, 82:482-492.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 482-492
    • Kunkel, T.A.1
  • 27
    • 0023056214 scopus 로고
    • Control of rDNA replication in Tetrahymena involves a cis-acting upstream repeat of a promoter element
    • Larson, D. D., Blackburn, E. H., Yaeger, P. C. & Orias, E. 1986. Control of rDNA replication in Tetrahymena involves a cis-acting upstream repeat of a promoter element. Cell, 47:229-240.
    • (1986) Cell , vol.47 , pp. 229-240
    • Larson, D.D.1    Blackburn, E.H.2    Yaeger, P.C.3    Orias, E.4
  • 28
    • 0021158357 scopus 로고
    • The structure of ribosomal RNA
    • Noller, H. F. 1984. The structure of ribosomal RNA. Ann. Rev. Biochem., 53:119-162.
    • (1984) Ann. Rev. Biochem. , vol.53 , pp. 119-162
    • Noller, H.F.1
  • 29
    • 0026185295 scopus 로고
    • PCR amplification of Tetrahymena rDNA segments starting with individual cells
    • Orias, E., Hashimoto, N., Chau, M. F. & Higashinakagawa, T. 1991. PCR amplification of Tetrahymena rDNA segments starting with individual cells. J. Protozool., 38:306-311.
    • (1991) J. Protozool. , vol.38 , pp. 306-311
    • Orias, E.1    Hashimoto, N.2    Chau, M.F.3    Higashinakagawa, T.4
  • 30
    • 0021100774 scopus 로고
    • Transcribed and non-transcribed regions of Tetrahymena ribosomal gene chromatin have different accessibilities to micrococcal nuclease
    • Palen, T. E. & Cech, T. R. 1983. Transcribed and non-transcribed regions of Tetrahymena ribosomal gene chromatin have different accessibilities to micrococcal nuclease. Nucleic Acids Res., 11:2077-2091.
    • (1983) Nucleic Acids Res. , vol.11 , pp. 2077-2091
    • Palen, T.E.1    Cech, T.R.2
  • 31
    • 0021413577 scopus 로고
    • Chromatin structure at the replication origins and transcription-initiation regions of the ribosomal RNA genes of Tetrahymena
    • Palen, T. E. & Cech, T. R. 1984. Chromatin structure at the replication origins and transcription-initiation regions of the ribosomal RNA genes of Tetrahymena. Cell, 36:933-942.
    • (1984) Cell , vol.36 , pp. 933-942
    • Palen, T.E.1    Cech, T.R.2
  • 32
    • 0020105241 scopus 로고
    • Allele-specific, selective amplification of a ribosomal RNA gene in Tetrahymena thermophila
    • Pan, W. C., Orias, E., Flacks, M. & Blackburn, E. H. 1982. Allele-specific, selective amplification of a ribosomal RNA gene in Tetrahymena thermophila. Cell, 28:595-604.
    • (1982) Cell , vol.28 , pp. 595-604
    • Pan, W.C.1    Orias, E.2    Flacks, M.3    Blackburn, E.H.4
  • 33
    • 0028231010 scopus 로고
    • The DNA of ciliated protozoa
    • Prescott, D. M. 1994. The DNA of ciliated protozoa. Microbiol. Rev., 58:233-267.
    • (1994) Microbiol. Rev. , vol.58 , pp. 233-267
    • Prescott, D.M.1
  • 34
    • 0022098888 scopus 로고
    • Large scale synchronous mating and the study of macronuclear development in Euplotes crassus
    • Roth, M. R., Lin, M.-Y. & Prescott, D. M. 1985. Large scale synchronous mating and the study of macronuclear development in Euplotes crassus. J. Cell Biol., 101:79-84.
    • (1985) J. Cell Biol. , vol.101 , pp. 79-84
    • Roth, M.R.1    Lin, M.-Y.2    Prescott, D.M.3
  • 35
    • 0022670876 scopus 로고
    • Sequence of the small subunit ribosomal RNA gene from the hypotrichous ciliate Euplotes aediculatus
    • Sogin, M. L., Swanton, M. T., Gunderson, J. H. & Elwood, H. J. 1986. Sequence of the small subunit ribosomal RNA gene from the hypotrichous ciliate Euplotes aediculatus. J. Protozool., 33:26-29.
    • (1986) J. Protozool. , vol.33 , pp. 26-29
    • Sogin, M.L.1    Swanton, M.T.2    Gunderson, J.H.3    Elwood, H.J.4
  • 36
    • 0021892944 scopus 로고
    • The nucleotide sequence of the 17S ribosomal RNA gene of Tetrahymena thermophila and the identification of point mutations resulting in resistance to the antibiotics paromomycin and hygromycin
    • Spangler, E. A. & Blackburn, E. H. 1985. The nucleotide sequence of the 17S ribosomal RNA gene of Tetrahymena thermophila and the identification of point mutations resulting in resistance to the antibiotics paromomycin and hygromycin. J. Biol. Chem., 260:6334-6340.
    • (1985) J. Biol. Chem. , vol.260 , pp. 6334-6340
    • Spangler, E.A.1    Blackburn, E.H.2
  • 37
    • 0018901005 scopus 로고
    • Isolation and mapping of the rRNA genes in the macronucleus of Oxytricha fallax
    • Spear, B. B. 1980. Isolation and mapping of the rRNA genes in the macronucleus of Oxytricha fallax. Chromosoma, 77:193-202.
    • (1980) Chromosoma , vol.77 , pp. 193-202
    • Spear, B.B.1
  • 38
    • 0018843472 scopus 로고
    • Arrangement of coding and non-coding sequences in the DNA molecules coding for rRNAs in Oxytricha sp. DNA of ciliated protozoa
    • Swanton, M. T., Greslin, A. F. & Prescott, D. M. 1980. Arrangement of coding and non-coding sequences in the DNA molecules coding for rRNAs in Oxytricha sp. DNA of ciliated protozoa. Chromosoma, 77:203-215.
    • (1980) Chromosoma , vol.77 , pp. 203-215
    • Swanton, M.T.1    Greslin, A.F.2    Prescott, D.M.3
  • 39
    • 0020328677 scopus 로고
    • The organization of macronuclear rDNA molecules of four hypotrichous cil-iated protozoans
    • Swanton, M. T., McCarroll, R. M. & Spear, B. B. 1982. The organization of macronuclear rDNA molecules of four hypotrichous cil-iated protozoans. Chromosoma, 85:1-9.
    • (1982) Chromosoma , vol.85 , pp. 1-9
    • Swanton, M.T.1    McCarroll, R.M.2    Spear, B.B.3
  • 40
    • 0024634987 scopus 로고
    • Identifying functional regions of rRNA by insertion mutagenesis and complete gene replacement in Tetrahymena thermophila
    • Sweeney, R. & Yao, M. C. 1989. Identifying functional regions of rRNA by insertion mutagenesis and complete gene replacement in Tetrahymena thermophila. EMBO J., 8:933-938.
    • (1989) EMBO J. , vol.8 , pp. 933-938
    • Sweeney, R.1    Yao, M.C.2
  • 41
    • 0027282106 scopus 로고
    • Phenotypic effects of targeted mutations in the small subunit rRNA gene of Tetrahymena thermophila
    • Sweeney, R., Chen, L. & Yao, M. C. 1993. Phenotypic effects of targeted mutations in the small subunit rRNA gene of Tetrahymena thermophila. Mol. Cell. Biol., 13:4814-4825.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 4814-4825
    • Sweeney, R.1    Chen, L.2    Yao, M.C.3
  • 42
    • 0028303179 scopus 로고
    • An rRNA variable region has an evolutionarily conserved essential role despite sequence divergence
    • Sweeney, R., Chen, L. & Yao, M. C. 1994. An rRNA variable region has an evolutionarily conserved essential role despite sequence divergence. Mol. Cell. Biol., 14:4203-4215.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 4203-4215
    • Sweeney, R.1    Chen, L.2    Yao, M.C.3
  • 43
    • 0029737347 scopus 로고    scopus 로고
    • Antisense ribosomes: rRNA as a vehicle for antisense RNAs
    • Sweeney, R., Fan, Q. & Yao, M. 1996. Antisense ribosomes: rRNA as a vehicle for antisense RNAs. Proc. Natl. Acad. Sci. USA, 93: 8518-8523.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 8518-8523
    • Sweeney, R.1    Fan, Q.2    Yao, M.3
  • 44
    • 0026031180 scopus 로고
    • A mutation in the large subunit ribosomal RNA gene of Tetrahymena confers anisomycin resistance and cold sensitivity
    • Sweeney, R., Yao, C. H. & Yao, M. C. 1991. A mutation in the large subunit ribosomal RNA gene of Tetrahymena confers anisomycin resistance and cold sensitivity. Genetics, 127:327-334.
    • (1991) Genetics , vol.127 , pp. 327-334
    • Sweeney, R.1    Yao, C.H.2    Yao, M.C.3
  • 45
    • 0022490466 scopus 로고
    • Transformation of Tetrahymena thermophila by microinjection of ribosomal RNA genes
    • Tondravi, M. M. & Yao, M. C. 1986. Transformation of Tetrahymena thermophila by microinjection of ribosomal RNA genes. Proc. Natl. Acad. Sci. USA, 83:4369-4373.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 4369-4373
    • Tondravi, M.M.1    Yao, M.C.2
  • 46
    • 0002664931 scopus 로고
    • An integrated study of the species problem in the Euplotes crassus-minuta-vannus group
    • Valbonesi, A., Ortenzi, C. & Luporini, P. 1988. An integrated study of the species problem in the Euplotes crassus-minuta-vannus group. J. Protozool., 35:38-45.
    • (1988) J. Protozool. , vol.35 , pp. 38-45
    • Valbonesi, A.1    Ortenzi, C.2    Luporini, P.3
  • 47
    • 0029000336 scopus 로고
    • The processing of macronuclear-destined DNA sequences microinjected into the macronuclear anlagen of the hypotrichous ciliate Stylonchia lemnae
    • Wen, J. P., Eder, C. & Lipps, H. J. 1995. The processing of macronuclear-destined DNA sequences microinjected into the macronuclear anlagen of the hypotrichous ciliate Stylonchia lemnae. Nucleic Acids Res., 23:1704-1709.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 1704-1709
    • Wen, J.P.1    Eder, C.2    Lipps, H.J.3
  • 48
    • 0025222602 scopus 로고
    • The controlling sequence for site-specific chromosome breakage in Tetrahymena
    • Yao, M. C., Yao, C. H. & Monks, B. 1990. The controlling sequence for site-specific chromosome breakage in Tetrahymena. Cell, 63: 763-772.
    • (1990) Cell , vol.63 , pp. 763-772
    • Yao, M.C.1    Yao, C.H.2    Monks, B.3


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