메뉴 건너뛰기




Volumn 5, Issue 3, 1999, Pages 333-343

The role of overlapping U1 and U11 5' splice site sequences in a negative regulator of splicing

Author keywords

Retrovirus; Rous Sarcoma Virus; snRNPs

Indexed keywords

ARTICLE; BASE PAIRING; BINDING SITE; GENE DISRUPTION; NONHUMAN; POINT MUTATION; PRIORITY JOURNAL; REGULATOR GENE; RNA SPLICING; ROUS SARCOMA ONCOVIRUS; VIRUS REPLICATION;

EID: 0033055771     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838299981347     Document Type: Article
Times cited : (33)

References (53)
  • 1
    • 0023796286 scopus 로고
    • Regulation of Rous sarcoma virus RNA splicing and stability
    • Arrigo S, Beemon K. 1988. Regulation of Rous sarcoma virus RNA splicing and stability. Mol Cell Biol 8:4858-4867.
    • (1988) Mol Cell Biol , vol.8 , pp. 4858-4867
    • Arrigo, S.1    Beemon, K.2
  • 2
    • 0023081619 scopus 로고
    • Cis-acting regulatory elements within gag genes of avian retroviruses
    • Arrigo S, Yun M, Beemon K. 1987. cis-acting regulatory elements within gag genes of avian retroviruses. Mol Cell Biol 7:388-397.
    • (1987) Mol Cell Biol , vol.7 , pp. 388-397
    • Arrigo, S.1    Yun, M.2    Beemon, K.3
  • 3
    • 0031419692 scopus 로고    scopus 로고
    • RNA regulatory elements in the genomes of simple retroviruses
    • Banks JD, Beemon KL, Linial ML. 1997. RNA regulatory elements in the genomes of simple retroviruses. Semin Virol 8:194-204.
    • (1997) Semin Virol , vol.8 , pp. 194-204
    • Banks, J.D.1    Beemon, K.L.2    Linial, M.L.3
  • 4
    • 0026315967 scopus 로고
    • Nonsense codons within the Rous sarcoma virus gag gene decrease the stability of unspliced viral RNA
    • Barker GF, Beemon K. 1991. Nonsense codons within the Rous sarcoma virus gag gene decrease the stability of unspliced viral RNA. Mol Cell Biol 11:2760-2768.
    • (1991) Mol Cell Biol , vol.11 , pp. 2760-2768
    • Barker, G.F.1    Beemon, K.2
  • 5
    • 0003604405 scopus 로고
    • The diverse world of small ribonucleoproteins
    • Gesteland RF, Atkins JF, eds. Plainview, NY: Cold Spring Harbor Laboratory Press
    • Baserga SJ, Steitz JA. 1993. The diverse world of small ribonucleoproteins. In: Gesteland RF, Atkins JF, eds. The RNA world. Plainview, NY: Cold Spring Harbor Laboratory Press. pp 359-381.
    • (1993) The RNA World , pp. 359-381
    • Baserga, S.J.1    Steitz, J.A.2
  • 6
    • 0003358914 scopus 로고    scopus 로고
    • Retroviridae: The viruses and their replication
    • Fields BN, Knipe DM, Howley PM, eds. New York: Raven Press
    • Coffin JM. 1996. Retroviridae: The viruses and their replication. In: Fields BN, Knipe DM, Howley PM, eds. Fields virology. New York: Raven Press. pp 1767-1847.
    • (1996) Fields Virology , pp. 1767-1847
    • Coffin, J.M.1
  • 7
    • 0032029767 scopus 로고    scopus 로고
    • SR protein and snRNP requirements for assembly of the Rous sarcoma virus negative regulator of splicing complex in vitro
    • Cook CR, McNally MT. 1998. SR protein and snRNP requirements for assembly of the Rous sarcoma virus negative regulator of splicing complex in vitro. Virology 242:211-220.
    • (1998) Virology , vol.242 , pp. 211-220
    • Cook, C.R.1    McNally, M.T.2
  • 8
    • 0031306509 scopus 로고    scopus 로고
    • Terminal intron dinucleotide sequences do not distinguish between U2-and U12-dependent introns
    • Dietrich RC, Incorvaia R, Padgett RA. 1997. Terminal intron dinucleotide sequences do not distinguish between U2-and U12-dependent introns. Mol Cell 1:151-160.
    • (1997) Mol Cell , vol.1 , pp. 151-160
    • Dietrich, R.C.1    Incorvaia, R.2    Padgett, R.A.3
  • 9
    • 0027982009 scopus 로고
    • Sequences homologous to 5′ splice sites are required for the inhibitory activity of papillomavirus late 3′ untranslated regions
    • Furth PA, Choe W-T, Rex JH, Byrne JC, Baker CC. 1994. Sequences homologous to 5′ splice sites are required for the inhibitory activity of papillomavirus late 3′ untranslated regions. Mol Cell Biol 14:5278-5289.
    • (1994) Mol Cell Biol , vol.14 , pp. 5278-5289
    • Furth, P.A.1    Choe, W.-T.2    Rex, J.H.3    Byrne, J.C.4    Baker, C.C.5
  • 11
    • 0027501973 scopus 로고
    • Mutation of an RSV intronic element abolishes both U11/U12 snRNP binding and negative regulation of splicing
    • Gontarek RR, McNally MT, Beemon K. 1993. Mutation of an RSV intronic element abolishes both U11/U12 snRNP binding and negative regulation of splicing. Genes & Dev 7:1926-1936.
    • (1993) Genes & Dev , vol.7 , pp. 1926-1936
    • Gontarek, R.R.1    McNally, M.T.2    Beemon, K.3
  • 12
    • 0028366003 scopus 로고
    • Conserved sequences in a class of rare eukaryotic introns with non-consensus splice sites
    • Hall SL, Padgett RA. 1994. Conserved sequences in a class of rare eukaryotic introns with non-consensus splice sites. J Mol Biol 239:357-365.
    • (1994) J Mol Biol , vol.239 , pp. 357-365
    • Hall, S.L.1    Padgett, R.A.2
  • 13
    • 0029989519 scopus 로고    scopus 로고
    • Requirement of U12 snRNA for the in vivo splicing of a minor class of eukaryotic nuclear pre-mRNA introns
    • Hall SL, Padgett RA. 1996. Requirement of U12 snRNA for the in vivo splicing of a minor class of eukaryotic nuclear pre-mRNA introns. Science 271:1716-1718.
    • (1996) Science , vol.271 , pp. 1716-1718
    • Hall, S.L.1    Padgett, R.A.2
  • 16
    • 0023770974 scopus 로고
    • Cis-acting intron mutations that affect the efficiency of avian retroviral RNA splicing: Implications for mechanisms of control
    • Katz RA, Kotler M, Skalka AM. 1988. cis-acting intron mutations that affect the efficiency of avian retroviral RNA splicing: Implications for mechanisms of control. J Virol 62:2686-2695.
    • (1988) J Virol , vol.62 , pp. 2686-2695
    • Katz, R.A.1    Kotler, M.2    Skalka, A.M.3
  • 17
    • 0025156779 scopus 로고
    • Control of retroviral RNA splicing through maintenance of suboptimal processing signals
    • Katz RA, Skalka AM. 1990. Control of retroviral RNA splicing through maintenance of suboptimal processing signals. Mol Cell Biol 10:696-704.
    • (1990) Mol Cell Biol , vol.10 , pp. 696-704
    • Katz, R.A.1    Skalka, A.M.2
  • 18
    • 0030941474 scopus 로고    scopus 로고
    • U11 snRNA interacts in vivo with the 5′ splice site of U12-dependent (AU-AC) introns
    • Kolossova I, Padgett RA. 1997. U11 snRNA interacts in vivo with the 5′ splice site of U12-dependent (AU-AC) introns. RNA 3:227-233.
    • (1997) RNA , vol.3 , pp. 227-233
    • Kolossova, I.1    Padgett, R.A.2
  • 19
    • 0023649668 scopus 로고
    • Creation of a processed pseudogene by retroviral infection
    • Linial M. 1987. Creation of a processed pseudogene by retroviral infection. Cell 49:93-102.
    • (1987) Cell , vol.49 , pp. 93-102
    • Linial, M.1
  • 20
    • 0030067593 scopus 로고    scopus 로고
    • An intron enhancer recognized by splicing factors activates polyadenylation
    • Lou H, Gagel RF, Berget SF. 1996. An intron enhancer recognized by splicing factors activates polyadenylation. Genes & Dev 10:208-219.
    • (1996) Genes & Dev , vol.10 , pp. 208-219
    • Lou, H.1    Gagel, R.F.2    Berget, S.F.3
  • 21
    • 0025169566 scopus 로고
    • U1 small nuclear RNA plays a direct role in the formation of a rev-regulated human immunodeficiency virus env mRNA that remains unspliced
    • Lu X, Heimer J, Rekosh D, Hammarskjold M-L. 1990. U1 small nuclear RNA plays a direct role in the formation of a rev-regulated human immunodeficiency virus env mRNA that remains unspliced. Proc Natl Acad Sci USA 87:7598-7602.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 7598-7602
    • Lu, X.1    Heimer, J.2    Rekosh, D.3    Hammarskjold, M.-L.4
  • 22
    • 0029767662 scopus 로고    scopus 로고
    • SR proteins and splicing control
    • Manley JL, Tacke R. 1996. SR proteins and splicing control. Genes & Dev 10:1569-1579.
    • (1996) Genes & Dev , vol.10 , pp. 1569-1579
    • Manley, J.L.1    Tacke, R.2
  • 23
    • 0026500529 scopus 로고
    • Intronic sequences and 3′ splice sites control Rous sarcoma virus RNA splicing
    • McNally MT, Beemon K. 1992. Intronic sequences and 3′ splice sites control Rous sarcoma virus RNA splicing. J Virol 66:6-11.
    • (1992) J Virol , vol.66 , pp. 6-11
    • McNally, M.T.1    Beemon, K.2
  • 24
    • 0025953458 scopus 로고
    • Characterization of Rous sarcoma virus intronic sequences that negatively regulate splicing
    • McNally MT, Gontarek RR, Beemon K. 1991. Characterization of Rous sarcoma virus intronic sequences that negatively regulate splicing. Virology 185:99-108.
    • (1991) Virology , vol.185 , pp. 99-108
    • McNally, M.T.1    Gontarek, R.R.2    Beemon, K.3
  • 25
    • 0030061154 scopus 로고    scopus 로고
    • SR protein splicing factors interact with the Rous sarcoma virus negative regulator of splicing element
    • McNally LM, McNally MT. 1996. SR protein splicing factors interact with the Rous sarcoma virus negative regulator of splicing element. J Virol 70:1163-1172.
    • (1996) J Virol , vol.70 , pp. 1163-1172
    • McNally, L.M.1    McNally, M.T.2
  • 26
    • 0031867840 scopus 로고    scopus 로고
    • An RNA splicing enhancer-like sequence is a component of a splicing inhibitor element from Rous sarcoma virus
    • McNally LM, McNally MT. 1998. An RNA splicing enhancer-like sequence is a component of a splicing inhibitor element from Rous sarcoma virus. Mol Cell Biol 18:3103-3111.
    • (1998) Mol Cell Biol , vol.18 , pp. 3103-3111
    • McNally, L.M.1    McNally, M.T.2
  • 27
    • 0001877802 scopus 로고
    • Splicing of precursors to mRNA by the spliceosome
    • Gesteland RF, Atkins JF, eds. Plainview, NY: Cold Spring Harbor Laboratory Press
    • Moore MJ, Query CC, Sharp P. 1993. Splicing of precursors to mRNA by the spliceosome. In: Gesteland RF, Atkins JF, eds. The RNA world. Plainview, NY: Cold Spring Harbor Laboratory Press. pp 303-357.
    • (1993) The RNA World , pp. 303-357
    • Moore, M.J.1    Query, C.C.2    Sharp, P.3
  • 28
    • 0029878317 scopus 로고    scopus 로고
    • AT-AC introns: An ATtACk on dogma
    • Mount SM. 1996. AT-AC introns: An ATtACk on dogma. Science 271:1690-1692.
    • (1996) Science , vol.271 , pp. 1690-1692
    • Mount, S.M.1
  • 29
    • 10144262703 scopus 로고    scopus 로고
    • A parallel spliceosome
    • Nilsen TW. 1996. A parallel spliceosome. Science 273:1813.
    • (1996) Science , vol.273 , pp. 1813
    • Nilsen, T.W.1
  • 30
    • 0029950099 scopus 로고    scopus 로고
    • Avian retroviral RNA element promotes unspliced RNA accumulation in the cytoplasm
    • Ogert RA, Lee LH, Beemon KL. 1996. Avian retroviral RNA element promotes unspliced RNA accumulation in the cytoplasm. J Virol 70:3834-3843.
    • (1996) J Virol , vol.70 , pp. 3834-3843
    • Ogert, R.A.1    Lee, L.H.2    Beemon, K.L.3
  • 31
    • 0028807036 scopus 로고
    • Two strong 5′ splice sites and competing, suboptimal 3′ splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA
    • O'Reilly MM, McNally MT, Beemon KL. 1995. Two strong 5′ splice sites and competing, suboptimal 3′ splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA. Virology 213:373-385.
    • (1995) Virology , vol.213 , pp. 373-385
    • O'Reilly, M.M.1    McNally, M.T.2    Beemon, K.L.3
  • 32
    • 0029917566 scopus 로고    scopus 로고
    • Possible role of splice acceptor site in expression of unspliced gag-containing message of Moloney murine leukemia virus
    • Oshima M, Odawara T, Matano T, Sakahira H, Kuchino Y, Iwamoto A, Yoshikura H. 1996. Possible role of splice acceptor site in expression of unspliced gag-containing message of Moloney murine leukemia virus. J Virol 70:2286-2295.
    • (1996) J Virol , vol.70 , pp. 2286-2295
    • Oshima, M.1    Odawara, T.2    Matano, T.3    Sakahira, H.4    Kuchino, Y.5    Iwamoto, A.6    Yoshikura, H.7
  • 33
    • 0027494083 scopus 로고
    • Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity
    • Purcell DF, Martin MA. 1993. Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity. J Virol 67:6365-6378.
    • (1993) J Virol , vol.67 , pp. 6365-6378
    • Purcell, D.F.1    Martin, M.A.2
  • 34
    • 0001118596 scopus 로고    scopus 로고
    • Synthesis and processing of viral RNA
    • Coffin JM, Hughes SH, Varmus HE, eds. Plainview, NY: Cold Spring Harbor Laboratory Press
    • Rabson AB, Graves BJ. 1997. Synthesis and processing of viral RNA. In: Coffin JM, Hughes SH, Varmus HE, eds. Retroviruses. Plainview, NY: Cold Spring Harbor Laboratory Press. pp 205-261.
    • (1997) Retroviruses , pp. 205-261
    • Rabson, A.B.1    Graves, B.J.2
  • 35
    • 0014262342 scopus 로고
    • Effects of local cell concentrations upon the growth of chick embryo cells in tissue culture
    • Rein A, Rubin H. 1968. Effects of local cell concentrations upon the growth of chick embryo cells in tissue culture. Exp Cell Res 45:666-6787.
    • (1968) Exp Cell Res , vol.45 , pp. 666-6787
    • Rein, A.1    Rubin, H.2
  • 36
    • 0025925206 scopus 로고
    • Stabilities of consecutive A*C, C*C, G*G, U*C, and U*U mismatches in RNA internal loops: Evidence for stable hydrogen-bonded U*U and C*C+ pairs
    • SantaLucia J Jr, Kierzek R, Turner DH. 1991. Stabilities of consecutive A*C, C*C, G*G, U*C, and U*U mismatches in RNA internal loops: Evidence for stable hydrogen-bonded U*U and C*C+ pairs. Biochemistry 30:8242-8251.
    • (1991) Biochemistry , vol.30 , pp. 8242-8251
    • SantaLucia J., Jr.1    Kierzek, R.2    Turner, D.H.3
  • 37
    • 0020594561 scopus 로고
    • Nucleotide sequence of Rous sarcoma virus
    • Schwartz DE, Tizard R, Gilbert W. 1983. Nucleotide sequence of Rous sarcoma virus. Cell 32:853-869.
    • (1983) Cell , vol.32 , pp. 853-869
    • Schwartz, D.E.1    Tizard, R.2    Gilbert, W.3
  • 38
    • 0031456850 scopus 로고    scopus 로고
    • Classification of introns: U2-type or U12-type
    • Sharp PA, Burge CB. 1997. Classification of introns: U2-type or U12-type. Cell 91:875-879.
    • (1997) Cell , vol.91 , pp. 875-879
    • Sharp, P.A.1    Burge, C.B.2
  • 39
    • 0026644140 scopus 로고
    • The mechanism of somatic inhibition of Drosophila P-element pre-mRNA splicing: Multiprotein complexes at an exon pseudo-5′ splice site control U1 snRNP binding
    • Siebel CW, Fresco LD, Rio DC. 1992. The mechanism of somatic inhibition of Drosophila P-element pre-mRNA splicing: Multiprotein complexes at an exon pseudo-5′ splice site control U1 snRNP binding. Genes & Dev 6:1386-1401.
    • (1992) Genes & Dev , vol.6 , pp. 1386-1401
    • Siebel, C.W.1    Fresco, L.D.2    Rio, D.C.3
  • 40
    • 0030795034 scopus 로고    scopus 로고
    • Genetic determinant of rapid-onset B-cell lymphoma by avian leukosis virus
    • Smith MR, Smith RE, Dunkel I, Hou V, Beemon KL, Hayward WS. 1997. Genetic determinant of rapid-onset B-cell lymphoma by avian leukosis virus. J Virol 71:6534-6540.
    • (1997) J Virol , vol.71 , pp. 6534-6540
    • Smith, M.R.1    Smith, R.E.2    Dunkel, I.3    Hou, V.4    Beemon, K.L.5    Hayward, W.S.6
  • 41
    • 0024262333 scopus 로고
    • Synthesis and processing of avian sarcoma retrovirus RNA
    • Stoltzfus CM. 1988. Synthesis and processing of avian sarcoma retrovirus RNA. Adv Virus Res 35:1-38.
    • (1988) Adv Virus Res , vol.35 , pp. 1-38
    • Stoltzfus, C.M.1
  • 42
    • 0024589788 scopus 로고
    • Multiple regions in the Rous sarcoma virus src gene intron act in cis to affect the accumulation of unspliced RNA
    • Stoltzfus CM, Fogarty SJ 1989. Multiple regions in the Rous sarcoma virus src gene intron act in cis to affect the accumulation of unspliced RNA. J Virol 63:1669-1676.
    • (1989) J Virol , vol.63 , pp. 1669-1676
    • Stoltzfus, C.M.1    Fogarty, S.J.2
  • 43
    • 0029863992 scopus 로고    scopus 로고
    • A novel spliceosome containing U11, U12, and U5 snRNPS excises a minor class (AT-AC) intron in vitro
    • Tarn WY, Steitz JA. 1996a. A novel spliceosome containing U11, U12, and U5 snRNPS excises a minor class (AT-AC) intron in vitro. Cell 84:801-811.
    • (1996) Cell , vol.84 , pp. 801-811
    • Tarn, W.Y.1    Steitz, J.A.2
  • 44
    • 0029763477 scopus 로고    scopus 로고
    • Highly diverged U4 and U6 small nuclear RNAs required for splicing rare AT-AC introns
    • Tarn WY, Steitz JA. 1996b. Highly diverged U4 and U6 small nuclear RNAs required for splicing rare AT-AC introns. Science 273:1824-1832.
    • (1996) Science , vol.273 , pp. 1824-1832
    • Tarn, W.Y.1    Steitz, J.A.2
  • 45
    • 0030995509 scopus 로고    scopus 로고
    • Pre-mRNA splicing: The discovery of a new spliceosome doubles the challenge
    • Tarn WY, Steitz JA. 1997. Pre-mRNA splicing: The discovery of a new spliceosome doubles the challenge. Trends Biochem Sci 22:132-137.
    • (1997) Trends Biochem Sci , vol.22 , pp. 132-137
    • Tarn, W.Y.1    Steitz, J.A.2
  • 46
    • 0032527760 scopus 로고    scopus 로고
    • Genetic analysis of the SR protein ASF/SF22: Interchangeability of RS domains and negative control of splicing
    • Wang J, Xiao S-H, Manley JL. 1998. Genetic analysis of the SR protein ASF/SF22: Interchangeability of RS domains and negative control of splicing. Genes & Dev 12:2222-2233.
    • (1998) Genes & Dev , vol.12 , pp. 2222-2233
    • Wang, J.1    Xiao, S.-H.2    Manley, J.L.3
  • 47
    • 0026561544 scopus 로고
    • The low-abundance U11 and U12 small nuclear ribonucleoproteins (snRNPs) interact to form a two-snRNP complex
    • Wassarman KM, Steitz JA. 1992. The low-abundance U11 and U12 small nuclear ribonucleoproteins (snRNPs) interact to form a two-snRNP complex. Mol Cell Biol 12:1276-1285.
    • (1992) Mol Cell Biol , vol.12 , pp. 1276-1285
    • Wassarman, K.M.1    Steitz, J.A.2
  • 48
    • 0027328715 scopus 로고
    • Characterization of a small (25-Kilodalton) derivative of the Rous sarcoma virus Gag protein competent for particle release
    • Weldon RA Jr, Wills JW. 1993. Characterization of a small (25-Kilodalton) derivative of the Rous sarcoma virus Gag protein competent for particle release. J Virol 67:5550-5561.
    • (1993) J Virol , vol.67 , pp. 5550-5561
    • Weldon R.A., Jr.1    Wills, J.W.2
  • 50
    • 0030575916 scopus 로고    scopus 로고
    • U1-mediated exon definition interactions between AT-AC and GT-AG introns
    • Wu Q, Krainer AR. 1996. U1-mediated exon definition interactions between AT-AC and GT-AG introns. Science 274:1005-1008.
    • (1996) Science , vol.274 , pp. 1005-1008
    • Wu, Q.1    Krainer, A.R.2
  • 51
    • 0030918785 scopus 로고    scopus 로고
    • Site-specific crosslinking of mammalian U11 and U6atac to the 5′ splice site of an AT-AC intron
    • Yu YT, Steitz JA. 1997. Site-specific crosslinking of mammalian U11 and U6atac to the 5′ splice site of an AT-AC intron. Proc Natl Acad Sci USA 94:6030-6035.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 6030-6035
    • Yu, Y.T.1    Steitz, J.A.2
  • 52
    • 0028870109 scopus 로고
    • A suboptimal src 3′ splice site is necessary for efficient replication of Rous sarcoma virus
    • Zhang L, Stoltzfus CM. 1995. A suboptimal src 3′ splice site is necessary for efficient replication of Rous sarcoma virus. Virology 206:1099-1107.
    • (1995) Virology , vol.206 , pp. 1099-1107
    • Zhang, L.1    Stoltzfus, C.M.2
  • 53
    • 0022550119 scopus 로고
    • A compensatory base change in U1 snRNA suppresses a 5′ splice site mutation
    • Zhuang Y, Weiner A. 1986. A compensatory base change in U1 snRNA suppresses a 5′ splice site mutation. Cell 46:827-835.
    • (1986) Cell , vol.46 , pp. 827-835
    • Zhuang, Y.1    Weiner, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.