Molecular phylogenetic analysis of human immunodeficiency virus type 1 strains obtained from Korean patients: env gene sequences

AIDS Research and Human Retroviruses

Volumn 15, Issue 3, 1999, Pages 303-307

  Kim, Young Bong ^a,b   Cho, Young Keol ^c   Lee, Hee Jung ^c   Kim, Chang Kyu ^b   Kim, Yoo Kyum ^c   Yang, Jai Myung ^a  

^a Sogang University   (South Korea)

^b Chong Kun Dang Research Institute   (South Korea)

^c University of Ulsan College of Medicine   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; ENVELOPE GENE; GENETIC VARIABILITY; HUMAN; HUMAN CELL; HUMAN IMMUNODEFICIENCY VIRUS 1; KOREA; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; VIRUS GENE; VIRUS STRAIN;

ADOLESCENT; ADULT; AMINO ACID SEQUENCE; BASE SEQUENCE; CHILD; FEMALE; GENES, ENV; HIV ENVELOPE PROTEIN GP120; HIV INFECTIONS; HIV-1; HUMANS; KOREA; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EID: 0033053508     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/088922299311493     Document Type: Article

References (8)

1. Janssens W, Heyndrickx L, VandePeer Y, Bouckaert A, Fransen K, Motte YJ, Gershy-Damet, GM, Peeters M, Piot P, and van der Groen G: Molecular phylogeny of part of the env gene of HIV-1 strains isolated in Cote d'Ivoire. AIDS 1993;8:21-26.
2. Louwagie J, McCutchan FE, Peeters M, Brennan TP, Sanders-Buell E, Eddy GA, van der Groen G, Fransen K, Gershy-Damet GM, Deleys R, and Burke DS: Phylogenetic analysis of gag gene from 70 internalional HIV-1 isolates provides evidence for multiple genotypes. AIDS 1993;7:769-780.
3. Delwart EL, Shpaer EG, Louwagie J, Grez M, Rübsamen-Waigmann H, and Mullins JI: Genetic relationships determined by a DNA heteroduplex mobility assay: Analysis of HIV-1 env genes. Science 1993;262:1257-1261.
4. Belda FJ, Baelow KI, and Clewley JP: Subtyping HIV-1 by improved resolution of the heteroduplexes on agarose gels. J Acquir Immune Defic Syndr Hum Retrovirol 1997;16:218-220.
5. Sherefa K, Sonnerberg A, Sternberg J, and Sallberg M: Rapid grouping of HIV-1 infection in subtypes A to E by V3 peptide serotyping and its relation to sequence analysis. Biochem Biophys Res Commun 1994;205:1658-1664.
6. Myers G, Korber B, Wain-Hobson S, Smith RF, and Pavlakis GN: Human Retroviruses and AIDS Database. Los Alamos National Laboratory, Los Alamos, New Mexico, 1994.
7. Kang MR, Cho YK, Chun J, Kim YB, Lee I, Lee HJ, Kim SH, Kim YK, Yoon K, Yang JM, Kim JM, Shin YO, Kang C, Lee JS, Choi KW, Kim DG, Fitch WM, and Kim S: Phylogenetic analysis of the nef gene reveals a distinctive monophyletic clade in Korean HIV-1 cases. J Acquir Immune Defic Syndr Hum Retrovirol 1998;17: 58-68.
8. Felsenstein J: PHYLIP (Phylogeny Inference Package), version 3.5. Department of Genetics, University of Washington, Seattle, Washington, 1993.