Purification, cloning, and characterization of the 16S RNA m5C967 methyltransferase from Escherichia coli

Biochemistry

Volumn 38, Issue 6, 1999, Pages 1884-1892

  Tscherne, Joan S ^b,c   Nurse, Kelvin ^b,d   Popienick, Paul ^b,e   Michel, Hanspeter ^f   Sochacki, Marek ^f,g   Ofengand, James ^a,b  

^a Univ of Miami School of Medicine ^*  (United States)

^b UNIVERSITY OF MIAMI MILLER SCHOOL OF MEDICINE   (United States)

^c Bergen Community College   (United States)

^d GLAXOSMITHKLINE   (United Kingdom)

^e Tarrant County College   (United States)

^f HOFFMANN LA ROCHE INC   (United States)

^g CENTRE OF MOLECULAR AND MACROMOLECULAR STUDIES   (Poland)

Author keywords

[No Author keywords available]

Indexed keywords

METHYLTRANSFERASE;

ANTICODON; ARTICLE; CARBOXY TERMINAL SEQUENCE; ENZYME ANALYSIS; ENZYME PURIFICATION; ESCHERICHIA COLI; MASS SPECTROMETRY; METHYLATION; MOLECULAR CLONING; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN LOCALIZATION; RIBOSOME; RNA ANALYSIS;

5-METHYLCYTOSINE; AMINO ACID SEQUENCE; CLONING, MOLECULAR; CYTOSINE; DNA METHYLATION; ESCHERICHIA COLI; GENE EXPRESSION; GENES, BACTERIAL; MAGNESIUM; METHYLTRANSFERASES; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; RECOMBINANT PROTEINS; RNA, RIBOSOMAL, 16S; SUBSTRATE SPECIFICITY;

ANIMALIA; ARCHAEA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA; PROKARYOTA;

EID: 0033050006     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi981880l     Document Type: Article

References (39)

1. Green, R., and Koller, H. F. (1997) Annu. Rev. Biochem. 66, 679-716.
2. Brimacombe, R. (1995) Eur. J. Biochem. 230, 365-383.
3. Nöller, H. F., Hoffarth, V., and Zimniak, L. (1992) Science 256, 1416-1419.
4. Nitta, I., Ueda, T., and Watanabe, K. (1998) RNA 4, 257-267.
5. Bakin, A., Kowalak, J. A., McCloskey, J. A., and Ofengand, J. (1994) Nucleic Acids Res. 22, 3681-3684.
6. Santer, M., Sanier, U., Nurse, K., Bakin, A., Cunningham, P., Zain, M., O'Connell, D., and Ofengand, J. (1993) Biochemistry 32, 5539-5547.
7. Wrzesinski, J., Bakin, A., Nurse, K., Lane, B. G., and Ofengand, J. (1995) Biochemistry 34, 8904-8913.
8. von Ahsen, U., and Noller, H. F. (1995) Science 267, 234-237.
9. Youvan, D. C., and Hearst, J. E. (1981) Nucleic Acids Res. 9, 1723-1741.
10. Murgola, E. J., Hijazi, K. A., Göringer, H. U., and Dahlberg, A. E. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 4162-4165.
11. Cunningham, P. R., Nurse, K., Bakin, A., Weitzmann, C. J., Pflumm. M., and Ofengand, J. (1992) Biochemistry 31, 12012-12022.
12. Mueller, F., and Brimacombe, R. (1997) J. Mol. Biol. 271, 524-544.
13. Van Knippenberg, P. H. (1986) in Structure, Function, and Genetics of Ribosomes (Hardesly, B., and Kramer, G., Eds.) pp 412-424, Springer-Verlag, Berlin.
14. Krzyzosiak, W., Denman, R., Nurse, K., Hellman, W., Boublik, M., Gehrke, C. W., Agris, P. F., and Ofengand, J. (1987) Biochemistry 26, 2353-2364.
15. Denman, R., Nègre, D., Cunningham, P. R., Nurse, K., Colgan, J., Weitzmann, C., and Ofengand, J. (1989) Biochemistry 28, 1012-1019.
16. Cunningham, P. R., Richard, R. B., Weitzmann, C. J., Nurse, K., and Ofengand, J. (1991) Biochimie 73, 789-796.
17. Nègre, D., Weitzmann, C., and Ofengand, J. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 4902-4906.
18. Nègre, D., Weitzmann, C., and Ofengand, J. (1990) in UCLA Symposia on Molecular and Cellular Biology New Series, Volume 128, Nucleic Acid Methylation (Clawson, G. A., Willis, D. B., Weissbach, A., and Jones, P. A., Eds.) pp 1-17, Wiley-Liss, New York.
19. Weitzmann, C., Tumminia, S. J., Boublik, M., and Ofengand, J. (1991) Nucleic Acids Res. 19, 7089-7095.
20. Van Buul, C. P. J. J., and van Knippenberg, P. H. (1985) Gene 38, 65-72.
21. Bakin, A., and Ofengand, J. (1993) Biochemistry 32, 9754-9762.
22. Zyskind, J. W., and Bernstein, S. I. (1992) Recombinant DNA Laboratory Manual, p 187, Academic Press, San Diego, CA.
23. Matsudaira, P. (1987) J. Biol. Chem. 262, 10035-10038.
24. Denman, R., Weitzmann, C., Cunningham, P. R., Nègre, D., Nurse, K., Colgan, J., Pan, Y.-C., Miedel, M., and Ofengand, J. (1989) Biochemistry 28, 1002-1011.
25. Hunt, D. F., Alexander, J. E., McCormack, A. L., Martino, P. A., Michel, H., Shabanowitz, J., Sherman, N., Moseley, M. A., Jorgenson, J. W., and Tomer, K. B. (1991) in Techniques in Protein Chemistry II (Villafranca, J. J., Ed.) pp 441-454, Academic Press, New York.
26. Smith, R. D., Loo, J. A., OgorzalekLoo, R. R., Busman, M., and Udseth, H. R. (1991) Mass Spectrom. Rev. 10, 359-451.
27. Meinnel, T., and Blanquet, S. (1994) J. Bacteriol. 176, 7387-7390.
28. Blattner, F. R., Plunkett, G., III, Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., and Shao, Y. (1997) Science 277, 1453-1474.
29. Mazel, D., Coic, E., Blanchard, S., Saurin, W., and Marliere, P. (1997) J. Mol. Biol. 266, 939-949.
30. Rauè, H. A., Klootwijk, J., and Musters, W. (1988) Prog. Biophys. Mol. Biol. 51, 77-129.
31. Schloesser, A., Hamann, A., Bossemeyer, D., Schneider, E., and Bakker, E. P. (1993) Mol. Microbiol. 9, 533-544.
32. Pedrali-Noy, G., and Weissbach, A. (1986) J. Biol. Chem. 261, 7600-7602.
33. Stern, S., Weiser, B., and Noller, H. F. (1988) J. Mol. Biol. 204, 447-481.
34. Powers, T., and Noller, H. F. (1995) RNA I, 194-209.
35. Koonin, E. V., Tatusov, R. L., and Rudd, K. E. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 11921-11925.
36. Altschul, S. F., Madden, T. L., Schäffen, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
37. Koonin, E. V. (1994) Nucleic Acids Res. 22, 2476-2478.
38. Maden, B. E. H. (1990) Prog. Nucleic Acid Res. Mol. Biol. 39, 241-303.
39. Döring, T., Mitchell, P., Osswald, M., Bochkariov, D., and Brimacombe, R. (1994) EMBO J. 13, 2677-2685.