Detection and nucleotide sequence analysis of human caliciviruses (HuCVs) from samples in non-bacterial gastroenteritis outbreaks in Hokkaido, Japan

Microbiology and Immunology

Volumn 43, Issue 6, 1999, Pages 543-550

  Ohyama, Tohru ^a   Yoshizumi, Shima ^a   Sawada, Harumi ^a   Uchiyama, Yasuhiro ^a   Katoh, Yoshinobu ^a   Hamaoka, Naohiro ^a   Utagawa, Etsuko ^b  

^a HOKKAIDO INSTITUTE OF PUBLIC HEALTH   (Japan)

^b NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

Author keywords

Gastroenteritis; HuCV; RT PCR

Indexed keywords

ARTICLE; CALICIVIRUS; ELECTRON MICROSCOPY; EPIDEMIC; FECES ANALYSIS; GASTROENTERITIS; GENOTYPE; HUMAN; MAJOR CLINICAL STUDY; MOLECULAR CLONING; NONHUMAN; NORWALK GASTROENTERITIS VIRUS; NUCLEOTIDE SEQUENCE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; VIRUS DETECTION; VOMITING;

BACTERIA (MICROORGANISMS); CALICIVIRIDAE; NORWALK VIRUS; OSTREIDAE;

EID: 0033047921     PISSN: 03855600     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1348-0421.1999.tb02440.x     Document Type: Article

References (27)

1. Ando, T., Mulders, M.N., Lewis, D.C., Estes, M.K., Monroe, S.S., and Glass, R.I. 1994. Comparison of the polymerase region of small round structured virus strains previously classified in three antigenic types by solid-phase immune electron microscopy. Arch. Virol. 135: 217-226.
2. Carter, M.J., Milton, I.D., Meanger, J., Bennett, M., Gaskell, R.M., and Turner, P.C. 1992. The complete nucleotide sequence of a feline calicivirus. Virology 190: 443-448.
3. Cauchi, M.R., Doultree, J.C., Marshall, J.A., and Wright, P.J. 1996. Molecular characterization of Camberwell virus and sequence variation in ORF3 of small round-structured (Norwalk-like) viruses. J. Med. Virol. 49: 70-76.
4. Cubitt, D., Jiang, X., Wang, J., and Estes, M.K. 1994. Sequence similarity of human calicivirus and small round structured virus. J. Med. Virol. 43: 252-258.
5. De Leon, R., Matsui, S.M., Baric, R.S., Herrmann, J.E., Blacklow, N.R., Greenberg, H.B., and Sobsey, M.D. 1992. Detection of Norwalk virus in stool specimens by reverse transcriptase-polymerase chain reaction and nonradioactive oligoprobes. J. Clin. Microbiol. 30: 3151-3157.
6. Estes, M.K., Atmar, R.L., and Hardy. M.E. 1997. Norwalk and related diarrhea viruses, p. 1073-1095. In Richman, D.D., Whiteley, R.J., and Hayden, F.G. (eds), Clinical virology. Churchill Livingstone, New York.
7. Gray, J.J., Green, J., Cunliffe, C., Gallimore, C., Lee, J.V., Neal, K., and Brown, D.W.G. 1997. Mixed genogroup SRSV infections among a party of canoeist exposed to contaminated recreational water. J. Med. Virol. 52: 425-429.
8. Green, J., Norcott, J.R, Lewis, D., Arnold, C., and Brown, D.W.G. 1993. Norwalk-like viruses: detection of genomic diversity by polymerase chain reaction. J. Clin. Microbiol. 31: 3007-3012.
9. Green, S.M., Lambden, P.R., Caul, E.O., Ashley, C.R., and Clark, I.N. 1995. Capsid diversity in small round-structured viruses: molecular characterization of an antigenically distinct human enteric calicivirus. Virus Res. 37: 271-283.
10. Jiang, X., Graham, D.Y., Wang, K., and Estes, M.K. 1990. Norwalk virus genome cloning and characterization. Science 250: 1580-1583.
11. Jiang, X., Wang, J., Graham, D.Y., and Estes, M.K. 1992. Expression, self-assembly, and antigenicity of the Norwalk virus capsid protein. J. Virol. 66: 6527-6532.
12. Jiang, X., Wang, M., Wang, K., and Estes, M.K. 1992. Detection of Norwalk virus in stool by polymerase chain reaction. J. Clin. Microbiol. 30: 2529-2534.
13. Jiang, X., Wang, M., Wang, K., and Estes, M.K. 1993. Sequencing and genomic organization of Norwalk virus. Virology 195: 51-61.
14. Jiang, X., Matson, D.O., Cubitt, W.D., and Estes, M.K. 1996. Genetic and antigenic diversity of human calicivirus-es (HuCVs) using RT-PCR and new EIAs. Arch. Virol. Suppl. 12: 251-262.
15. Kapikian, A.Z., Wyatt, R.G., Dolin, R., Thornhill, T.S., Kaliaca, A.R., and Chanock, R.M. 1992. Visualization by immune electron microscopy of a particle associated with acute infectious nonbacterial gastroenteritis. J. Virol. 10: 1075-1081.
16. Lew, J.F., Petric, M., Kapikian, A.Z., Jiang, X., Estes, M.K., and Green, K.Y. 1994. Identification of minireovirus as a Norwalk-like virus in pediatric patients with gastroenteritis. J. Virol. 68: 3391-3396.
17. Lew, J.F., Kapikian, A.Z., Valdesuso, J., and Green, K.Y. 1994. Molecular characterization of Hawaii virus and other Norwalk-like viruses: evidence for genetic polymorphism among human caliciviruses. J. Infect. Dis. 170: 535-542.
18. Madore, H.P., Treanor, J.J., Pray, K.A., and Doline, R. 1986. Enzyme-linked immunosorbent assays for Snow Mountain and Norwalk agents of viral gastroenteritis. J. Clin. Microbiol. 24: 456-459.
19. Meyers, G., Wirblich, C., and Thiel, H.J. 1991. Rabbit hemorrhagic disease virus - molecular cloning and nucleotide sequencing of a calicivirus genome. Virology 184: 664-676.
20. Moe, C.L., Gentsch, J., Ando, T., Grohmann, G., Monroe, S.S., Jiang, X., Wang, J., Estes, M.K., Seto, Y., Humphrey, C., Stine, S., and Glass, R.I. 1994. Application of PCR to detect Norwalk virus in fecal specimens from outbreaks of gastroenteritis. J. Clin. Microbiol. 32: 642-648.
21. Neill, J.P., Reardon, I.M., and Heinrikson, R.L. 1991. Nucleotide sequence and expression of the capsid protein gene of feline calicivirus. J. Virol. 65: 5440-5447.
22. Noel, J.S., Ando, T., Leite, J.P., Green, K.Y., Dingle, K.E., Estes, M.K., Seto, Y., Monroe, S.S., and Glass, R.I. 1997. Correlation of patient immune response with genetically characterized small round-structured viruses involved in outbreaks of nonbacterial acute gastroenteritis in the United States, 1990 to 1995. J. Med. Virol. 53: 372-383.
23. Saito, H., Saito, S., Kamada, K., Harata, S., Sato, H., Morita, M., and Miyajima, Y. 1998. Application of RT-PCR designed from the sequence of the local SRSV strain to the screening in viral gastroenteritis outbreaks. Microbiol. Immunol. 42: 439-446.
24. Sugieda, M., Nakajima, K., and Nakajima, S. 1996. Outbreaks of Norwalk-like virus-associated gastroenteritis traced to shellfish: coexistence of two genotypes in one specimen. Epidemiol. Infect. 116: 339-346.
25. Thornhill, T.S., Wyatt, R.G., Kalica, A.R., Doline, R., Chanock, R.M., and Kapikian, A.Z. 1977. Detection by immune electron microscopy of 26- to 27-nm virus like particles associated with two family outbreaks of gastroenteritis. J. Infect. Dis. 135: 20-27.
26. Wright, P.J., Gunesekere, I.C., Doultree, J.C., and Marshall, J.A. 1998. Small round-structured (Norwalk-like) viruses and classical human caliciviruses in southeastern Australia, 1980-1996. J. Med. Virol. 55: 312-320.
27. Yamazaki, K., Oseto, M., Utagawa, E., Kimoto, T., Minekawa, Y., Inoue, S., Yamazaki, S., Okuno, Y., and Oishi, I. 1996. Reverse transcription-polymerase chain reaction detection and sequence analysis of small round-structured viruses in Japan. Arch. Virol. 12: 271-276.