Randomly amplified polymorphic DNA profile-based measures of genetic diversity in crayfish correlated with environmental impacts

Environmental Toxicology and Chemistry

Volumn 18, Issue 3, 1999, Pages 504-508

  Krane, Dan E ^a   Sternberg, David C ^a   Burton, G Allen ^a  

^a WRIGHT STATE UNIVERSITY   (United States)

Author keywords

Anthropogenic stress; DNA polymerase chain reaction; Environmental impact; Genetic diversity; Randomly amplified polymorphic

Indexed keywords

ANTHROPOGENIC EFFECT; AQUATIC ENVIRONMENT; BIODIVERSITY; ENVIRONMENTAL STRESS;

ARTICLE; CRAYFISH; ECOSYSTEM; ECOTOXICITY; ENVIRONMENTAL IMPACT ASSESSMENT; GENETIC VARIABILITY; MOLECULAR EVOLUTION; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RANDOM AMPLIFIED POLYMORPHIC DNA; STRAIN DIFFERENCE;

ANIMALIA; ASTACOIDEA; INVERTEBRATA; ORCONECTES RUSTICUS;

EID: 0033038391     PISSN: 07307268     EISSN: None     Source Type: Journal    
DOI: 10.1897/1551-5028(1999)018<0504:RAPDPB>2.3.CO;2     Document Type: Article

References (39)

1. National Research Council. 1992. Restoration of Aquatic Ecosystems. National Academy Press, Washington, DC.
2. National Research Council. 1981. Testing of the Effects of Chemicals on Ecosystems. National Academy Press, Washington, DC.
3. McCarthy JF. Shugart LR. 1990. Biological markers of environmental contamination. In McCarthy JF, Shugart LR. eds, Bidmarkers of Environmental Contamination. Lewis, Boca Raton, FL, USA, pp 3-14.
4. Burton GA. 1991. Assessing the toxicity of freshwater sediments. Environ Toxicol Chem 10:1585-1627.
5. Thorpe JE, Koonce JF. 1981. Assessing and managing man's impact on fish genetic resources. Can J Fish Aquat Sci 38:1899-1907.
6. Allendorf FW, Leary RF. 1986. Heterozygosity and fitness in natural populations of animals. In Soule ME, ed, Conservation Biology: The Science of Scarcity and Diversity. Sinauer, Sunderland, MA, USA, pp 57-76.
7. Lavie B, Nevo E. 1982. Heavy metal selection of phosphoglucose isomerase allozymes in marine gastropods. Mar Biol 71:17-22.
8. Lavie B, Nevo E, Zoller U. 1984. Differential viability of phosphoglucose isomerase allozyme genotypes of marine snails in nonionic detergent and crude oil-surfactant mixtures. Environ Res 35:270-276.
9. Nevo E, Noy R, Lavie B, Bieles A, Muchtar S. 1986. Genetic diversity and resistance to marine pollution. Biol J Linn Soc 29: 139-144.
10. Benton MJ, Guttman SI. 1990. Effect of allozyme genotype on the survivorship of mayflies (Stenonema femoratum) exposed to copper. J North Am Benthol Soc 9:271-276.
11. Beardmore JA, Dobzhansky TH, Paulovsky D. 1960. An attempt to measure the fitness of monomorphic and polymorphic populations of Drosophila pseudoobscura. Heredity 14:49-55.
12. McDonald JF, Ayala FJ. 1974. Genetic response to environmental heterogeneity. Nature 250:572-574.
13. Mitton JB, Koehn RK. 1975. Genetic organization and adaptive response of allozymes to ecological variables in Fundulus heteroclitus. Genetics 79:97-111.
14. Lavie B, Nevo E. 1986. The interactive effects of cadmium and mercury pollution on allozyme polymorphism in the marine gastropod Cerithium scabridum. Mar Pollut Bull 17:21-23.
15. Benton MJ, Diamon SA, Guttman SI. 1994. A genetic and morphometric comparison of Helisoma trivolvis and Gambusia holbrooki from clean and contaminated habitats. Ecotoxicol Environ Saf 29:20-37.
16. Gillespie RB, Guttman SI. 1993. Correlations between water quality and frequencies of allozyme genotypes in spotfin shiner (Notropis spilopterus) populations. In Gorusch JE, Dwyer FJ, Ingersoll CG, La Point TW, eds, Environmental Toxicology and Risk Assessment, Vol 2. American Society for Testing and Materials, Philadelphia, PA, pp 134-145.
17. Mulvey M, Newman MC, Chazal A, Keklak MM, Heagler MG, Hales LS. 1995. Genetic and demographic responses of mosquitofish (Gambusia holbrooki Girard 1859) populations stressed by mercury. Environ Toxicol Chem 14:1411-1418.
18. Gooch JL, Schopf TJM. 1970. Population genetics of marine species of the phylum Ectoprocta. Biol Bull 138:138-150.
19. Gillespie RB, Facemire CF, Guttman SI. 1991. Cryptic variation in electrophoretically detected allozymes of caddisfly larvae (Hydropsyche simulons, Hydropsyche bifida) and spotfin shiner (Notropis spilopterus): Implications for alleles and genotype determinations. Biochem Syst Ecol 19:541-548.
20. Foré SA, Guttman SI, Bailer AJ, Altfater DJ, Counts BV. 1995. Exploratory analysis of population genetic assessment as a water quality indicator: I. Pimephales notatus. Ecotoxicol Environ Saf 30:24-35.
21. Foré SA, Guttman SI, Bailer AJ, Altfater DJ, Counts BV. 1995. Exploratory analysis of population genetic assessment as a water quality indicator: II. Campostoma anomalum. Ecotoxicol Environ Saf 30:36-46.
22. Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SA. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531-6535.
23. Tinker NA, Fortin MG, Mather DE. 1993. Random amplified polymorphic DNA and pedigree analysis in spring barley. Theor Appl Genet 85:976-984.
24. Penner GA, et al. 1993. Reproducibility of random amplified polymorphic DNA (RAPD) analyses among laboratories. PCR Methods Appl 2:341-345.
25. Grosberg RK, Levitan DR, Cameron BB. 1995. Characterization of genetic structure and genealogies using RAPD-PCR markers: A random primer for the novice and nervous. In Ferraris JD, Palumbi SR, eds, Molecular Zoology: Advances, Strategies and Protocols. John Wiley & Sons, New York, NY, USA, pp 67-100.
26. del Tufo JP, Tingey SV. 1994. RAPD assay: A novel technique for genetic diagnostics. Methods Mol Biol 28:237-241.
27. Jacher KA, Burton GA, Swift MC, DeYoe HR. 1992. Comparisons of benthic stream communities with toxicity indicators. Abstracts. Annual Meeting of the North American Benthological Society, Louisville, KY, USA.
28. Burton GA. 1994. Evaluation of multiple bioindicators and end-points in stream toxicity assessments. Final Report. Office of Exploratory Research, U.S. Environmental Protection Agency. Washington, DC.
29. Ireland DS, Burton GA, Hess GG. 1996. In situ toxicity evaluations of turbidity and photoinduction of polycyclic aromatic hydrocarbons. Environ Toxicol Chem 15:574-581.
30. Rowland C, Burton GA. 1996. Effect of exposure method on benthic organism responses. Abstracts, 17th Annual Meeting, Society of Environmental Toxicology and Chemistry, Washington, DC, November 17-21, p 284.
31. Clark AG, Lanigan CMS. 1993. Prospects for estimating nucleotide divergence times with RAPDs. Mol Biol Evol 10:1096-1111.
32. Hollander M, Wolfe DA. 1973. Nonparametric Statistical Methods. John Wiley & Sons, New York, NY, USA.
33. Guttman SI, Berg DJ. 1998. Changes in the genetic diversity of aquatic organisms in the Great Lakes: Causes and consequences. SETAC News January 1998:23-24.
34. Karr JR, Fausch KD, Angermier PL, Yant PR, Schlosser IJ. 1986. Assessing biological integrity in running water: A method and its rationale. Ill Nat Hist Surv Spec Publ 5:28-65.
35. Karr JR. 1993. Defining and assessing ecological integrity: Beyond water quality. Environ Toxicol Chem 12:1521-1531.
36. State of Ohio Environmental Protection Agency. 1987. Biological Criteria for the Protection of Aquatic Life, Vol 1 - The Role of Biological Data in Water Quality Assessment. Columbus, OH, USA.
37. State of Ohio Environmental Protection Agency. 1987. Biological Criteria for the Protection of Aquatic Life, Vol 2 - User's Manual for Biological Field Assessment of Ohio Surface Waters. Columbus, OH, USA.
38. State of Ohio Environmental Protection Agency. 1987. Biological Criteria for the Protection of Aquatic Life, Vol 3 - Standardized Biological Field Sampling and Laboratory Methods for Assessing Fish and Macroinvertebrate Communities. Columbus, OH, USA.
39. State of Ohio Environmental Protection Agency. 1989. Addendum to: Biological Criteria for the Protection of Aquatic Life, Vol 2 - User's Manual for Biological Field Assessment of Ohio Surface Waters. Columbus, OH, USA.