메뉴 건너뛰기




Volumn 18, Issue 3, 1999, Pages 293-302

Interactions between introns via exon definition in plant pre-mRNA splicing

Author keywords

[No Author keywords available]

Indexed keywords

EXON; INTRON; MESSENGER RNA; PLANT GENETICS; RNA SPLICING;

EID: 0033037869     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.1999.00463.x     Document Type: Article
Times cited : (17)

References (50)
  • 1
    • 0010785239 scopus 로고
    • Clinical defects in pre-mRNA processing
    • (Lamond, A.I., ed.). Austin: R.G. Landes Company
    • Antoniou, M. (1995) Clinical defects in pre-mRNA processing. In Pre-Mrna Processing (Lamond, A.I., ed.). Austin: R.G. Landes Company, pp. 187-202.
    • (1995) Pre-Mrna Processing , pp. 187-202
    • Antoniou, M.1
  • 2
    • 0030268481 scopus 로고    scopus 로고
    • U-rich tracts enhance 3′ splice site recognition in plant nuclei
    • Baynton, C.E., Potthoff, S.J., McCullough, A.J. and Schuler, M.A. (1996) U-rich tracts enhance 3′ splice site recognition in plant nuclei. Plant J. 10, 703-711.
    • (1996) Plant J. , vol.10 , pp. 703-711
    • Baynton, C.E.1    Potthoff, S.J.2    McCullough, A.J.3    Schuler, M.A.4
  • 3
    • 0028895417 scopus 로고
    • Exon recognition in vertebrate splicing
    • Berget, S.M. (1995) Exon recognition in vertebrate splicing. J. Biol. Chem, 270, 2411-2414.
    • (1995) J. Biol. Chem , vol.270 , pp. 2411-2414
    • Berget, S.M.1
  • 4
    • 0029382603 scopus 로고
    • Finding splice sites within a wilderness of RNA
    • Black, D.L. (1995) Finding splice sites within a wilderness of RNA. RNA, 1, 763-771.
    • (1995) RNA , vol.1 , pp. 763-771
    • Black, D.L.1
  • 5
    • 0023055381 scopus 로고
    • A catalogue of splice junction and putative branch point sequences from plant introns
    • Brown, J.W.S. (1986) A catalogue of splice junction and putative branch point sequences from plant introns. Nucl Acid Res. 14, 9459-9559.
    • (1986) Nucl Acid Res. , vol.14 , pp. 9459-9559
    • Brown, J.W.S.1
  • 6
    • 0030295312 scopus 로고    scopus 로고
    • Arabidopsis intron mutations and pre-mRNA splicing
    • Brown, J.W.S. (1996) Arabidopsis intron mutations and pre-mRNA splicing. Plant J. 10, 771-780.
    • (1996) Plant J. , vol.10 , pp. 771-780
    • Brown, J.W.S.1
  • 10
    • 0031171283 scopus 로고    scopus 로고
    • A combinatorial role for exon, intron and splice site sequences in splicing in maize
    • Carle-Urioste, J.C., Brendel, V. and Walbot, V. (1997) A combinatorial role for exon, intron and splice site sequences in splicing in maize. Plant J. 11, 1253-1263.
    • (1997) Plant J. , vol.11 , pp. 1253-1263
    • Carle-Urioste, J.C.1    Brendel, V.2    Walbot, V.3
  • 11
    • 0030988942 scopus 로고    scopus 로고
    • Identification of a new class of exonic splicing enhancers by in vivo selection
    • Coulter, L.R., Landree, M.A. and Cooper, T.A. (1997) Identification of a new class of exonic splicing enhancers by in vivo selection. Mol. Cell. Biol. 17, 2143-2150.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 2143-2150
    • Coulter, L.R.1    Landree, M.A.2    Cooper, T.A.3
  • 12
    • 0026039804 scopus 로고
    • Selection of splice sites in pre-mRNAs with short internal exons
    • Dominski, Z. and Kole, R. (1991) Selection of splice sites in pre-mRNAs with short internal exons. Mol. Cell. Biol. 11, 6075-6083.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 6075-6083
    • Dominski, Z.1    Kole, R.2
  • 13
    • 0031279984 scopus 로고    scopus 로고
    • Structural analysis of elements contributing to 5′ splice site selection in plant pre-mRNA transcripts
    • Egoavil, C., Marton, H.A., Baynton, C.E., McCullough, A.J. and Schuler, M.A. (1997) Structural analysis of elements contributing to 5′ splice site selection in plant pre-mRNA transcripts. Plant J. 12, 971-980.
    • (1997) Plant J. , vol.12 , pp. 971-980
    • Egoavil, C.1    Marton, H.A.2    Baynton, C.E.3    McCullough, A.J.4    Schuler, M.A.5
  • 14
    • 0029372979 scopus 로고
    • The superfamily of arginine/serine-rich splicing factors
    • Fu, X.-D. (1995) The superfamily of arginine/serine-rich splicing factors. RNA, 1, 663-680.
    • (1995) RNA , vol.1 , pp. 663-680
    • Fu, X.-D.1
  • 15
    • 0029664611 scopus 로고    scopus 로고
    • Characterisation of intronic uridine-rich sequence elements acting as possible targets for nuclear proteins during pre-mRNA splicing in Nicotiana plumbainifolia
    • Gniadkowski, M., Hemmings-Mieszcak, M., Klahre, U., Liu, H.-X. and Filipowicz, W. (1996) Characterisation of intronic uridine-rich sequence elements acting as possible targets for nuclear proteins during pre-mRNA splicing in Nicotiana plumbainifolia. Nucl. Acid. Res. 24, 619-627.
    • (1996) Nucl. Acid. Res. , vol.24 , pp. 619-627
    • Gniadkowski, M.1    Hemmings-Mieszcak, M.2    Klahre, U.3    Liu, H.-X.4    Filipowicz, W.5
  • 16
    • 0024967250 scopus 로고
    • The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing
    • Goodall, G.J. and Filipowicz, W. (1989) The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing. Cell, 58, 473-483.
    • (1989) Cell , vol.58 , pp. 473-483
    • Goodall, G.J.1    Filipowicz, W.2
  • 17
    • 0025433475 scopus 로고
    • The minimum functional length of pre-mRNA introns in monocots and dicots
    • Goodall, G.J. and Filipowicz, W. (1990) The minimum functional length of pre-mRNA introns in monocots and dicots. Plant Mol. Biol. 14, 727-733.
    • (1990) Plant Mol. Biol. , vol.14 , pp. 727-733
    • Goodall, G.J.1    Filipowicz, W.2
  • 18
    • 0025799927 scopus 로고
    • Different effects on intron nucleotide composition and secondary structure on pre-mRNA splicing in monocot an dicot plants
    • Goodall, G.J. and Filipowicz, W. (1991) Different effects on intron nucleotide composition and secondary structure on pre-mRNA splicing in monocot an dicot plants. EMBO J. 10, 2635-2644.
    • (1991) EMBO J. , vol.10 , pp. 2635-2644
    • Goodall, G.J.1    Filipowicz, W.2
  • 19
    • 0026132894 scopus 로고
    • The SV40 small t intron is accurately and efficiently spliced in tobacco cells
    • Hunt, A.G., Mogen, B.D., Chua, N.M. and Chua, N.-H. (1991). The SV40 small t intron is accurately and efficiently spliced in tobacco cells. Plant Mol. Biol. 16, 375-379.
    • (1991) Plant Mol. Biol. , vol.16 , pp. 375-379
    • Hunt, A.G.1    Mogen, B.D.2    Chua, N.M.3    Chua, N.-H.4
  • 20
    • 0000445757 scopus 로고
    • Monocot and dicot pre-mRNAs are processed with different efficiencies in transgenic tobacco
    • Keith, B. and Chua, N.-H. (1986) Monocot and dicot pre-mRNAs are processed with different efficiencies in transgenic tobacco. EMBO J. 5, 2419-2525.
    • (1986) EMBO J. , vol.5 , pp. 2419-2525
    • Keith, B.1    Chua, N.-H.2
  • 21
    • 0029891101 scopus 로고    scopus 로고
    • The structure and function of proteins involved in mammalian pre-mRNA splicing
    • Krämer, A. (1996) The structure and function of proteins involved in mammalian pre-mRNA splicing. Annu. Rev. Biochem. 65, 367-409.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 367-409
    • Krämer, A.1
  • 22
    • 0029125883 scopus 로고
    • Identification of a plant serine-arginine rich protein similar to mammalian splicing factor SF2/ASF
    • Lazar, G., Schaal, T., Maniatis, T. and Goodman, H.M. (1995) Identification of a plant serine-arginine rich protein similar to mammalian splicing factor SF2/ASF. Proc. Natl Acad. Sci. USA, 92, 7672-7676.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 7672-7676
    • Lazar, G.1    Schaal, T.2    Maniatis, T.3    Goodman, H.M.4
  • 24
    • 0030111434 scopus 로고    scopus 로고
    • Mapping of branchpoint nucleotides in mutant pre-mRNAs expressed in plant cells
    • Liu, H.-X. and Filipowicz, W. (1996) Mapping of branchpoint nucleotides in mutant pre-mRNAs expressed in plant cells. Plant J. 9, 381-389.
    • (1996) Plant J. , vol.9 , pp. 381-389
    • Liu, H.-X.1    Filipowicz, W.2
  • 25
    • 0029978019 scopus 로고    scopus 로고
    • Pre-mRNA splicing in plants: Characterization of Ser/Arg splicing factors
    • Lopato, S., Mayeda, A., Krainer, A.R. and Barta, A. (1996) Pre-mRNA splicing in plants: Characterization of Ser/Arg splicing factors. Proc. Natl Acad. Sci. USA, 93, 3074-3079.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 3074-3079
    • Lopato, S.1    Mayeda, A.2    Krainer, A.R.3    Barta, A.4
  • 26
    • 0027219254 scopus 로고
    • 3′ splice site selection in dicot plant nuclei is position dependent
    • Lou, H., McCullough, A.J. and Schuler, M.A. (1993) 3′ splice site selection in dicot plant nuclei is position dependent. Mol Cell Biol. 13, 4485-4493.
    • (1993) Mol Cell Biol. , vol.13 , pp. 4485-4493
    • Lou, H.1    McCullough, A.J.2    Schuler, M.A.3
  • 28
    • 0028280303 scopus 로고
    • Intron creation and polyadenylation in maize are directed by AU-rich RNA
    • Luehrsen, K.R. and Walbot, V. (1994a) Intron creation and polyadenylation in maize are directed by AU-rich RNA. Genes Dev. 8, 117-1130.
    • (1994) Genes Dev. , vol.8 , pp. 117-1130
    • Luehrsen, K.R.1    Walbot, V.2
  • 29
    • 0028371218 scopus 로고
    • Addition of A-rich and U-rich sequence increases the splicing efficiency of a deleted form of a maize intron
    • Luehrsen, K.R. and Walbot, V. (1994b) Addition of A-rich and U-rich sequence increases the splicing efficiency of a deleted form of a maize intron. Plant Mol Biol. 24, 449-463.
    • (1994) Plant Mol Biol. , vol.24 , pp. 449-463
    • Luehrsen, K.R.1    Walbot, V.2
  • 31
    • 0030344885 scopus 로고    scopus 로고
    • Interactions across exons can influence splice site recognition in plant nuclei
    • McCullough, A.J., Baynton, C.E. and Schuler, M.A. (1996) Interactions across exons can influence splice site recognition in plant nuclei. Plant Cell, 8, 2295-2307.
    • (1996) Plant Cell , vol.8 , pp. 2295-2307
    • McCullough, A.J.1    Baynton, C.E.2    Schuler, M.A.3
  • 32
    • 0027406041 scopus 로고
    • Factors affecting authentic 5′ splice site selection in plant nuclei
    • McCullough, A.J., Lou, H. and Schuler, M.A. (1993) Factors affecting authentic 5′ splice site selection in plant nuclei. Mol Cell Biol. 13, 1323-1331.
    • (1993) Mol Cell Biol. , vol.13 , pp. 1323-1331
    • McCullough, A.J.1    Lou, H.2    Schuler, M.A.3
  • 33
    • 0030753981 scopus 로고    scopus 로고
    • Intronic and exonic sequences modulate 5′ splice site selection in plant nuclei
    • McCullough, A.J. and Schuler, M.A. (1997) Intronic and exonic sequences modulate 5′ splice site selection in plant nuclei. Nucl. Acid. Res. 25, 1071-1077.
    • (1997) Nucl. Acid. Res. , vol.25 , pp. 1071-1077
    • McCullough, A.J.1    Schuler, M.A.2
  • 34
    • 0031260150 scopus 로고    scopus 로고
    • Internal AU-rich elements modulate activity of two competing 3′ splice sites in plant nuclei
    • Merritt, H., McCullough, A.J. and Schuler, M.A. (1997) Internal AU-rich elements modulate activity of two competing 3′ splice sites in plant nuclei. Plant J. 12, 937-943.
    • (1997) Plant J. , vol.12 , pp. 937-943
    • Merritt, H.1    McCullough, A.J.2    Schuler, M.A.3
  • 35
    • 0001877802 scopus 로고
    • Splicing of precursors to mRNA by the spliceosome
    • (Gesteland, R. and Atkins, J., eds). New York: Cold Spring Harbor Laboratory Press
    • Moore, M., Query, C. and Sharp, P. (1993) Splicing of precursors to mRNA by the spliceosome. In The RNA World (Gesteland, R. and Atkins, J., eds). New York: Cold Spring Harbor Laboratory Press, pp. 303-357.
    • (1993) The RNA World , pp. 303-357
    • Moore, M.1    Query, C.2    Sharp, P.3
  • 36
    • 0026657738 scopus 로고
    • Splicing signals in Drosophila - Intron size, information-content, and consensus sequences
    • Mount, S.M., Burks, C., Hertz, G., Stormo, G.D., White, O. and Fields, C. (1992) Splicing signals in Drosophila - intron size, information-content, and consensus sequences. Nucl. Acid. Res. 20, 4255-4262.
    • (1992) Nucl. Acid. Res. , vol.20 , pp. 4255-4262
    • Mount, S.M.1    Burks, C.2    Hertz, G.3    Stormo, G.D.4    White, O.5    Fields, C.6
  • 37
    • 0027431277 scopus 로고
    • In vivo cooperation between introns during pre-mRNA processing
    • Neel, H., Weil, D., Giansante, C. and Dautry, F. (1993) In vivo cooperation between introns during pre-mRNA processing. Genes Dev, 7, 2194-2205.
    • (1993) Genes Dev , vol.7 , pp. 2194-2205
    • Neel, H.1    Weil, D.2    Giansante, C.3    Dautry, F.4
  • 38
    • 0028010715 scopus 로고
    • Upstream introns influence the efficiency of final intron removal and RNA 3′-end formation
    • Nesic, D. and Maquat, L.E. (1994) Upstream introns influence the efficiency of final intron removal and RNA 3′-end formation. Genes Dev, 8, 363-375.
    • (1994) Genes Dev , vol.8 , pp. 363-375
    • Nesic, D.1    Maquat, L.E.2
  • 39
    • 0025098474 scopus 로고
    • Exon definition may facilitate splice site selection in RNAs with multiple exons
    • Robberson, B.L., Cote, G.J. and Berget, S.M. (1990) Exon definition may facilitate splice site selection in RNAs with multiple exons. Mol Cell Biol. 10, 84-94.
    • (1990) Mol Cell Biol. , vol.10 , pp. 84-94
    • Robberson, B.L.1    Cote, G.J.2    Berget, S.M.3
  • 40
    • 0027352169 scopus 로고
    • Efficient splicing of an AU-rich antisense intron sequence
    • Simpson, C.G. and Brown, J.W.S. (1993) Efficient splicing of an AU-rich antisense intron sequence. Plant Mol Biol. 21, 205-211.
    • (1993) Plant Mol Biol. , vol.21 , pp. 205-211
    • Simpson, C.G.1    Brown, J.W.S.2
  • 41
    • 0030111219 scopus 로고    scopus 로고
    • Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency
    • Simpson, C.G., Clark, G., Davidson, D., Smith, P. and Brown, J.W.S. (1996) Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency. Plant J. 9, 369-380.
    • (1996) Plant J. , vol.9 , pp. 369-380
    • Simpson, C.G.1    Clark, G.2    Davidson, D.3    Smith, P.4    Brown, J.W.S.5
  • 42
    • 84987791174 scopus 로고
    • Characteristics of plant pre-mRNA introns and transposable elements
    • (Croy, R.R.D., ed.). Oxford: Blackwell Scientific Publications
    • Simpson, C.G., Leader, D.J., Brown, J.W.S. and Franklin, T. (1993) Characteristics of plant pre-mRNA introns and transposable elements. In Plant Molecular Biology Labfax (Croy, R.R.D., ed.). Oxford: Blackwell Scientific Publications, pp. 183-251.
    • (1993) Plant Molecular Biology Labfax , pp. 183-251
    • Simpson, C.G.1    Leader, D.J.2    Brown, J.W.S.3    Franklin, T.4
  • 43
    • 0032126732 scopus 로고    scopus 로고
    • Characterisation of exon skipping mutants of the COP1 gene from Arabidopsis
    • Simpson, C.G., McQuade, C., Lyon, J. and Brown, J.W.S. (1998) Characterisation of exon skipping mutants of the COP1 gene from Arabidopsis. Plant J. 15, 125-131.
    • (1998) Plant J. , vol.15 , pp. 125-131
    • Simpson, C.G.1    McQuade, C.2    Lyon, J.3    Brown, J.W.S.4
  • 44
    • 0029161561 scopus 로고
    • Molecular characterization of the spliceosomal proteins U1A and U2B″ from higher plants
    • Simpson, G.G., Clark, G.P., Rothnie, H.M., Boelens, W., van Venrooij, W. and Brown, J.W.S. (1995) Molecular characterization of the spliceosomal proteins U1A and U2B″ from higher plants. EMBO J. 14, 4540-4550.
    • (1995) EMBO J. , vol.14 , pp. 4540-4550
    • Simpson, G.G.1    Clark, G.P.2    Rothnie, H.M.3    Boelens, W.4    Van Venrooij, W.5    Brown, J.W.S.6
  • 45
    • 0030255869 scopus 로고    scopus 로고
    • Splicing of precursors to messenger RNA in higher plants: Mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery
    • Simpson, G.G. and Filipowicz, W. (1996) Splicing of precursors to messenger RNA in higher plants: Mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery. Plant Mol Biol. 32, 1-41.
    • (1996) Plant Mol Biol. , vol.32 , pp. 1-41
    • Simpson, G.G.1    Filipowicz, W.2
  • 46
    • 0027214101 scopus 로고
    • Scanning and competition between AGs are involved in 3′ splice site selection in mammalian introns
    • Smith, C.J.W., Chu, T.T. and Nadal-Ginard, B. (1993) Scanning and competition between AGs are involved in 3′ splice site selection in mammalian introns. Mol. Cell Biol. 13, 4939-4952.
    • (1993) Mol. Cell Biol. , vol.13 , pp. 4939-4952
    • Smith, C.J.W.1    Chu, T.T.2    Nadal-Ginard, B.3
  • 47
    • 0024470631 scopus 로고
    • Scanning from an independently specified branchpoint defines the 3′ splice site of mammalian introns
    • Smith, C.W.J., Porro, E.B., Patton, J.G. and Nadal-Ginard, B. (1989) Scanning from an independently specified branchpoint defines the 3′ splice site of mammalian introns. Nature, 342, 243-247.
    • (1989) Nature , vol.342 , pp. 243-247
    • Smith, C.W.J.1    Porro, E.B.2    Patton, J.G.3    Nadal-Ginard, B.4
  • 48
    • 0003229971 scopus 로고
    • Uridylate-rich small nuclear RNAs UsnRNAs, their genes and pseudogenes, and UsnRNPs in plants - Structure and function - A comparative approach
    • Solymosy, F. and Pollák, T. (1993) Uridylate-rich small nuclear RNAs UsnRNAs, their genes and pseudogenes, and UsnRNPs in plants - structure and function - a comparative approach. Crit. Rev. Plant Sci. 12, 275-369.
    • (1993) Crit. Rev. Plant Sci. , vol.12 , pp. 275-369
    • Solymosy, F.1    Pollák, T.2
  • 49
    • 0001807733 scopus 로고
    • Mechanisms of regulated pre-mRNA splicing
    • (Lamond, A.I., ed.). Austin: R.G. Landes Company
    • Valcárcel, J., Singh, R. and Green, M.R. (1995) Mechanisms of regulated pre-mRNA splicing. In Pre-mRNA Processing (Lamond, A.I., ed.). Austin: R.G. Landes Company, pp. 97-112.
    • (1995) Pre-mRNA Processing , pp. 97-112
    • Valcárcel, J.1    Singh, R.2    Green, M.R.3
  • 50
    • 0343907206 scopus 로고    scopus 로고
    • Protein functions in pre-mRNA splicing
    • Will, C. and Luhrmann, R. (1997) Protein functions in pre-mRNA splicing. Curr. Opin. Cell Biol. 9, 320-328.
    • (1997) Curr. Opin. Cell Biol. , vol.9 , pp. 320-328
    • Will, C.1    Luhrmann, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.