Molecular characterization of a new member of the protein 4.1 family (brain 4.1) in rat brain

Molecular Brain Research

Volumn 70, Issue 2, 1999, Pages 197-209

  Yamakawa, Hisashi ^a   Ohara, Reiko ^a   Nakajima, Daisuke ^a   Nakayama, Manabu ^a   Ohara, Osamu ^a  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

Author keywords

Brain; Comprehensive cDNA analysis; Membrane skeleton; Protein 4.1

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA;

AMINO ACID SEQUENCE; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; BRAIN; CELL MEMBRANE; CONTROLLED STUDY; CYTOSKELETON; DNA LIBRARY; ENZYME LINKED IMMUNOSORBENT ASSAY; GENE EXPRESSION; IMMUNOBLOTTING; MEMBRANE STRUCTURE; NONHUMAN; NORTHERN BLOTTING; PRIORITY JOURNAL; RAT;

EID: 0033017916     PISSN: 0169328X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0169-328X(99)00139-4     Document Type: Article

References (43)

1. An X.-L., Takakuwa Y., Nunomura W., Manno S., Mohandas N. Modulation of band 3-ankyrin interaction by protein 4.1. Functional implications in regulation of erythrocyte membrane mechanical properties. J. Biol. Chem. 271:1996;33187-33191.
2. Baklouti F., Huang S.-C., Vulliamy T.J., Delaunay J., Benz E.J. Jr. Organization of the human protein 4.1 genomic locus: new insights into the tissue-specific alternative splicing of the pre-mRNA. Genomics. 39:1997;289-302.
3. Church G.M., Gilbert W. Genomic sequencing. Proc. Natl. Acad. Sci. U.S.A. 81:1984;1991-1995.
4. Conboy J.G., Chan J., Mohandas N., Kan Y.W. Multiple protein 4.1 isoforms produced by alternative splicing in human erythroid cells. Proc. Natl. Acad. Sci. U.S.A. 85:1988;9062-9065.
5. Conboy J.G., Chan J.Y., Chasis J.A., Kan Y.W., Mohandas N. Tissue- and development-specific alternative RNA splicing regulates expression of multiple isoforms of erythroid membrane protein 4.1. J. Biol. Chem. 266:1991;8273-8280.
6. Correas I., Leto T.L., Speicher D.W., Marchesi V.T. Identification of the functional site of erythrocyte protein 4.1 involved in spectrin-actin association. J. Biol. Chem. 261:1986;3310-3315.
7. Correas I., Speicher D.W., Marchesi V.T. Structure of the spectrin-actin binding site of erythrocyte protein 4.1. J. Biol. Chem. 261:1986;13362-13366.
8. De Carcer G., Lallena M.-J., Correas I. Protein 4.1 is a component of the nuclear matrix of mammalian cells. Biochem. J. 312:1995;871-877.
9. Dodge J.T., Mitchell C., Hanahan D.J. The preparation and chemical characteristics of hemoglobin-free ghosts of human erythrocytes. Arch. Biochem. Biophys. 100:1963;119-130.
10. Goodman S.R., Casoria L.A., Coleman D.B., Zagon I.S. Identification and location of brain protein 4.1. Science. 224:1984;1433-1436.
11. Huang J.-P., Tang C.-J.C., Kou G.-H., Marchesi V.T., Benz E.J. Jr., Tang T.K. Genomic structure of the locus encoding protein 4.1. Structural basis for complex combinational patterns of tissue-specific alternative RNA splicing. J. Biol. Chem. 268:1993;3758-3766.
12. Ishikawa K.-I., Nagase T., Nakajima D., Seki N., Ohira M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes: VIII. 78 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 4:1997;307-313.
13. Ishikawa K.-I., Nagase T., Suyama M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes: X. Complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 5:1998;169-176.
14. Joens T., Drenckhahn D. Identification of the binding interface involved in linkage of cytoskeletal protein 4.1 to the erythrocyte anion exchanger. EMBO J. 11:1992;2863-2867.
15. Kelly G.M., Zelus B.D., Moon R.T. Identification of a calcium-dependent calmodulin-binding domain in Xenopus membrane skeleton protein 4.1. J. Biol. Chem. 266:1991;12469-12473.
16. Kozak M. Interpreting cDNA sequences: some insights from studies on translation. Mammalian Genome. 7:1996;563-574.
17. Krauss S.W., Larabell C.A., Lockett S., Gascard P., Penman S., Mohandas N., Chasis J.A. Structural protein 4.1 in the nucleus of human cells: dynamic rearrangements during cell division. J. Cell Biol. 137:1997;275-289.
18. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 277:1970;680-685.
19. Lallena M.-J., Correas I. Transcription-dependent redistribution of nuclear protein 4.1 to SC35-enriched nuclear domains. J. Cell Sci. 110:1997;239-247.
20. Lombardo C.R., Williardson B.M., Low P.S. Localization of the protein 4.1-binding site on the cytoplasmic domain of erythrocyte membrane band 3. J. Biol. Chem. 267:1992;9540-9546.
21. Luque C.M., Lallena M.-J., Alonso M.A., Correas I. An alternative domain determines nuclear localization in multifunctional protein 4.1. J. Biol. Chem. 273:1998;11643-11649.
22. Marfatia S.M., Lue R.A., Branton D., Chishti A.H. In vitro binding studies suggest a membrane-associated complex between erythroid p55, protein 4.1, and glycophorin C. J. Biol. Chem. 269:1994;8631-8634.
23. Marfatia S.M., Lue R.A., Branton D., Chishti A.H. Identification of the protein 4.1 binding interface on glycophorin C and p55, a homologue of the Drosophila discs-large tumor suppressor protein. J. Biol. Chem. 270:1995;715-719.
24. Marfatia S.M., Morais-Cabral J.H., Kim A.C., Byron O., Chishti A.H. The PDZ domain of human erythrocyte p55 mediates its binding to the cytoplasmic carboxyl terminus of glycophorin C. Analysis of the binding interface by in vitro mutagenesis. J. Biol. Chem. 272:1997;24191-24197.
25. Nagase T., Ishikawa K.-I., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes: IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 5:1998;31-39.
26. Nagase T., Ishikawa K.-I., Nakajima D., Ohira M., Seki N., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes: VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. DNA Res. 4:1997;141-150.
27. Nagase T., Ishikawa K.-I., Suyama M., Kikuno R., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. Prediction of the coding sequences of unidentified human genes: XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 5:1998;1-11.
28. 2+ and calmodulin. Implications for modulation of CD44-ankyrin interaction. J. Biol. Chem. 272:1997;30322-30328.
29. Ohara O., Nagase T., Ishikawa K.-I., Nakajima D., Ohira M., Seki N., Nomura N. Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins. DNA Res. 4:1997;53-59.
30. Ohara O., Ohara R., Yamakawa H., Nakajima D., Nakayama M. Characterization of a new beta-spectrin gene which is predominantly expressed in brain. Mol. Brain Res. 57:1998;181-192.
31. Parra M., Gascard P., Walensky L.D., Snyder S.H., Mohandas N., Conboy J.G. Cloning and characterization of 4.1G (EPB41L2), a new member of the skeletal protein 4.1 (EPB41) gene family. Genomics. 49:1998;298-306.
32. Peters L.L., Weier H.-U.G., Walensky L.D., Snyder S.H., Parra M., Mohandas N., Conboy J.G. Four paralogous protein 4.1 genes map to distinct chromosomes in mouse and human. Genomics. 54:1998;348-350.
33. Schischmanoff P.O., Winardi R., Discher D.E., Parra M.K., Bicknese S.E., Witkowska H.E., Conboy J.G., Mohandas N. Defining of the minimal domain of protein 4.1 involved in spectrin-actin binding. J. Biol. Chem. 270:1995;21243-21250.
34. Schischmanoff P.O., Yaswen P., Parra M.K., Lee G., Chasis J.A., Mohandas N., Conboy J.G. Cell shape-dependent regulation of protein 4.1 alternative pre-mRNA splicing in mammary epithelial cells. J. Biol. Chem. 272:1997;10254-10259.
35. Takeuchi K., Kawashima A., Nagafuchi A., Tsukita S. Structural diversity of band 4.1 superfamily members. J. Cell Sci. 107:1994;1921-1928.
36. 2+-dependent regulation of the spectrin/actin interaction by calmodulin and protein 4.1. J. Biol. Chem. 266:1991;1134-1140.
37. Tang T.K., Leto T.L., Correas I., Alonso M.A., Marchesi V.T., Benz E.J. Jr. Selective expression of an erythroid-specific isoform of protein 4.1. Proc. Natl. Acad. Sci. U.S.A. 85:1988;3713-3717.
38. Towbin H., Staehelin T., Gordon J. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. U.S.A. 76:1979;4350-4354.
39. R.D. Vale, G. Banker, Z.W. Hall, The Neuronal Cytoskeleton, in: Z.W. Hall (Ed.), An Introduction to Molecular Neurobiology, Sinauer Associates, Sunderland, 1991, pp. 247-280.
40. Walensky L.D., Gascard P., Fields M.E., Blackshaw S., Conboy J.G., Mohandas N., Snyder S.H. The 13-kDa FK506 binding protein, FKBP13, interacts with a novel homologue of the erythrocyte membrane cytoskeletal protein 4.1. J. Cell Biol. 141:1998;143-153.
41. Walensky L.D., Shi Z.T., Blackshaw S., DeVries A.C., Demas G.E., Gascard P., Nelson R.J., Conboy J.G., Rubin E.M., Snyder S.H., Mohandas N. Neurobehavioral deficits in mice lacking the erythrocyte membrane cytoskeletal protein 4.1. Curr. Biol. 8:1998;1269-1272.
42. Workman R.F., Low P.S. Biochemical analysis of potential sites for protein 4.1-mediated anchoring of the spectrin-actin skeleton to the erythrocyte membrane. J. Biol. Chem. 273:1998;6171-6176.
43. Yamakawa H., Ohara O. A DNA cycle sequencing reaction that minimizes compressions on an automated fluorescent sequencers. Nucleic Acids Res. 25:1997;1311-1312.