Detection of T cell receptor beta (TCRB) gene rearrangement patterns in T cell malignancies by Southern blot analysis

Leukemia

Volumn 13, Issue 6, 1999, Pages 965-974

  Langerak, A W ^a   Wolvers Tettero, I L M ^a   Van Dongen, J J M ^a  

^a ERASMUS MEDICAL CENTER   (Netherlands)

Author keywords

Rearrangement; Restriction map; Southern blot analysis; T cell malignancies; TCRB genes; TCRB probe

Indexed keywords

RESTRICTION ENDONUCLEASE; T LYMPHOCYTE RECEPTOR BETA CHAIN;

ACUTE GRANULOCYTIC LEUKEMIA; ACUTE LYMPHOBLASTIC LEUKEMIA; ALLELE; ARTICLE; GENE REARRANGEMENT; HUMAN; HUMAN CELL; INTRON; LYMPHOCYTE PROLIFERATION; NONHODGKIN LYMPHOMA; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROLYMPHOCYTIC LEUKEMIA; SOUTHERN BLOTTING; T CELL LYMPHOMA;

EID: 0033008835     PISSN: 08876924     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.leu.2401427     Document Type: Article

References (23)

1. Van Dongen JJM, Wolvers-Tettero ILM. Analysis of immunoglobulin and T-cell receptor genes. Part II: possibilities and limitations in the diagnosis and management of lymphoproliferative diseases and related disorders. Clin Chim Acta 1991; 198: 93-174.
2. Van Dongen JJM, Comans-Bitter WM, Wolvers-Tettero ILM, Borst J. Development of human T lymphocytes and their thymus-dependency. Thymus 1990; 16: 207-234.
3. Breit TM, Wolvers-Tettero ILM, Beishuizen A, Verhoeven M-AJ, Van Wering ER, Van Dongen JJM. Southern blot patterns, frequencies and junctional diversity of T-cell receptor δ gene rearrangements in acute lymphoblastic leukemia. Blood 1993; 82: 3063-3074.
4. Gorski J, Yassai M, Zhu X, Kissella B, Keever C, Flomenberg N. Circulating T cell repertoire complexity in normal individuals and bone marrow recipients analyzed by CDR3 size spectra typing. Correlation with immune status. J Immunol 1994; 152: 5109-5119.
5. Lefranc MP, Rabbitts TH. The human T-cell receptor gamma (TRG) genes. Trends Biochem Sci 1989; 14: 214-218.
6. Van Dongen JJM, Wolvers-Tettero ILM. Analysis of immunoglobulin and T cell receptor genes. Part I: Basic and technical aspects. Clin Chim Acta 1991; 198: 1-91.
7. Sims JE, Tunnacliffe A, Smith WJ, Rabbitts TH. Complexity of human T-cell antigen receptor beta-chain constant-and variable-region genes. Nature 1984; 312: 541-545.
8. Toyonaga B, Yoshikai Y, Vadasz V, Chin B, Mak TW. Organization and sequences of the diversity, joining, and constant region genes of the human T cell receptor β chain. Proc Natl Acad Sci USA 1985; 82: 8624-8628.
9. Wei S, Charmley P, Robinson MA, Concannon P. The extent of the human germline T-cell receptor V beta gene segment repertoire. Immunogenet 1994; 40: 27-36.
10. Slightom JL, Siemieniak DR, Sieu LC, Koop BF, Hood L. Nucleotide sequence analysis of 77.7 kb of the human V beta T-cell receptor gene locus: direct primer-walking using cosmid template DNAs. Genomics 1994; 20: 149-168.
11. Rowen L, Koop BF, Hood L. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. Science 1996; 272: 1755-1762.
12. Beishuizen A, Verhoeven M-AJ, Mol EJ, Breit TM, Wolvers-Tettero ILM, Van Dongen JJM. Detection of immunoglobulin heavy-chain gene rearrangements by Southern blot analysis: recommendations for optimal results. Leukemia 1993; 7: 2045-2053.
13. Beishuizen A, Verhoeven M-AJ, Mol EJ, Van Dongen JJM. Detection of immunoglobulin κ light chain gene rearrangement patterns by Southern blot analysis. Leukemia 1994; 8: 2228-2236.
14. Tümkaya T, Beishuizen A, Wolvers-Tettero ILM, Van Dongen JJM. Identification of immunoglobulin lambda isotype gene rearrangements by Southern blot analysis. Leukemia 1996; 10: 1834-1839.
15. Tümkaya T, Langerak AW, Van Dongen JJM. Immunogenotyping of B-cell malignancies. In: Lefkovits I (ed). Immunology Methods Manual: Section: Immunodiagnosis of B-cell Malignancies. Academic Press: London, 1997, pp 1859-1879.
16. Langerak AW, Szczepanski T, Van der Burg M, Wolvers-Tettero ILM, Van Dongen JJM. Heteroduplex PCR analysis of rearranged T cell receptor genes for clonality assessment in suspect T cell proliferations. Leukemia 1997; 11: 2192-2199.
17. Pongers-Willemse MJ, Seriu T, Stolz F, d'Aniello E, Gameiro P, Pisa P, Gonzalez M, Bartram CR, Panzer-Gruemayer ER, Biondi A, San Miguel JF, Van Dongen JJM. Primers and protocols for standardized detection of minimal residual disease in acute lymphoblastic leukemia using immunoglobulin and T cell receptor gene rearrangements and TAL1 deletions as PCR targets. Report of the BIOMED-1 Concerted Action: investigation of minimal residual disease in acute leukemia. Leukemia 1999; 13: 110-118.
18. Van Dongen JJM, Adriaansen HJ, Hooijkaas H. Immunological marker analysis of cells in the various hematopoietic differentiation stages and their malignant counterparts. In: Ruiter DJ, Fleuren GJ, Warnaar SO (eds). Application of Monoclonal Antibodies in Tumor Pathology. Martinus Nijhoff: Dordrecht, 1987, pp 87-116.
19. Sambrook J, Fritsch EF, Maniatis T. Molecular Cloning, a Laboratory Manual. Cold Spring Harbor Laboratory Press: Cold Spring Harbor, 1989.
20. Robinson MA, Kindt TJ. Segregation of polymorphic T cell receptor genes in human families. Proc Natl Acad Sci USA 1985; 82: 3804-3808.
21. Furley AJ, Mizutani S, Weilbaecher K, Dhaliwal HS, Ford AM, Chan LC, Molgaard HV, Toyonaga B, Mak T, Van den Elsen P, Gold D, Terhorst C, Greaves MF. Developmentally regulated rearrangement and expression of genes encoding the T-cell receptor-T3 complex. Cell 1986; 46: 75-87.
22. Szczepanski T, Langerak AW, Wolvers-Tettero ILM, Ossenkoppele GJ, Verhoef G, Stul M, Petersen EJ, de Bruijn MAC, van't Veer MB, van Dongen JJM. Immunoglobulin and T cell receptor gene rearrangement patterns in acute lymphoblastic leukemia are less mature in adults than in children: implications for selection of PCR targets for detection of minimal residual disease. Leukemia 1998; 12: 1081-1088.
23. Szczepanski T, Besihuizen A, Pongers-Willemse MJ, Hahlen K, van Wering ER, Wijkhuis JM, Tibbe GJM, de Bruijn MAC, van Dongen JJM. Cross-lineage T cell receptor gene rearrangements occurt in more than ninety percent of childhood precursor-B acute lymphoblastic leukemias: alternative PCR targets for detection of minimal residual disease. Leukemia 1999; 13: 196-205.