Error checking and graphical representation of multiple complete-digest (MCD) restriction-fragment maps

Genome Research

Volumn 9, Issue 1, 1999, Pages 79-90

  Thayer, Edward C ^a,c   Olson, Maynard V ^a   Karp, Richard M ^b  

^a UNIVERSITY OF WASHINGTON   (United States)

^b University of Washington   (United States)

^c ZYMOGENETICS INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; COMPUTER PROGRAM; ERROR; GENE MAPPING; LINEAR SYSTEM; MEASUREMENT; PRIORITY JOURNAL; RESTRICTION FRAGMENT;

ALGORITHMS; CLONING, MOLECULAR; GENETIC MARKERS; MATHEMATICAL COMPUTING; RESTRICTION MAPPING; SOFTWARE;

EID: 0033005036     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (8)

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2. Fasulo, D., T. Jiang, R.M. Karp, R. Settergren, and E.C. Thayer. 1996. An algorithmic approach to multiple complete digest mapping. In Proceedings of the First Annual International Conference on Computational Molecular Biology, pp. 118-127. ACM Press, New York, NY.
3. Green, E.D. and P. Green. 1991. Sequence-tagged site (STS) content mapping of human chromosomes: Theoretical considerations and early experiences. PCR Methods Appl. 1: 77.
4. Gillett, W., L. Hanks, G.K.-S. Wong, J. Yu, R. Lim, and M.V. Olson. 1996. Assembly of high-resolution restriction maps based on multiple complete digests of a redundant set of overlapping clones. Genomics 33: 389-408.
5. Jiang, T. and R.M. Karp. 1998. Mapping clones with a given ordering or interleaving. Algorithmica 21: 262-284.
6. Olson, M.V. and E.D. Green. 1990. Chromosomal region of the cystic fibrosis gene in yeast artificial chromosomes: A model for human genome mapping. Science 250: 94-98.
7. Olson, M.V. and P. Green. 1993. Criterion for the completeness of large-scale physical maps of DNA. Cold Spring Harbor Symp. Quant. Biol. 58: 349-355.
8. Wong, G.K.-S., J. Yu, E.C. Thayer, and M.V. Olson. 1997. Multiple-complete-digest (MCD) restriction-fragment mapping: Generating sequence-ready maps for large-scale DNA sequencing. Prof. Natl. Acad. Sci. 94: 5225-5230.