Water in actin polymerization

Biophysical Journal

Volumn 76, Issue 6, 1999, Pages 3261-3266

  Fuller, N ^a   Rand, R P ^a  

^a BROCK UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; ADENOSINE TRIPHOSPHATE MAGNESIUM; CALCIUM; F ACTIN; G ACTIN; NUCLEOTIDE; WATER;

ACTIN POLYMERIZATION; ANIMAL TISSUE; ARTICLE; BACK MUSCLE; BINDING SITE; CONTROLLED STUDY; LEG MUSCLE; NONHUMAN; OSMOTIC STRESS; RABBIT;

ANIMALIA; ORYCTOLAGUS CUNICULUS;

EID: 0033002412     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(99)77478-3     Document Type: Article

References (39)

1. Bezrukov, S. M., and I. Vodyanoy. 1993. Probing alamethicin channels with water-soluble polymers: effect on conductance of channel states. Biophys. J. 64:16-25.
2. Bezrukov, S. M., I. Vodyanoy, R. A. Brutyan, and J. J. Kasianowicz. 1996. Dynamics and free energy of polymers partitioning into a nanoscale pore. Macromolecules. 29:8517-8522.
3. Bezrukov, S. M., I. Vodyanoy, and V. A. Parsegian. 1994. Counting polymers moving through a single channel. Nature. 370:279-281.
4. Bhat, T. N., G. A. Bentley, G. Boulot, M. I. Greene, D. Tello, W. Dall'Acqua, H. Souchon, F. P. Schwartz, R. A. Mariuzza, and R. J. Poljak. 1994. Bound water molecules and conformational stabilization help mediate an antigen-antibody association. Proc. Natl. Acad. Sci. USA. 91:1089-1093.
5. Brenner, S. L., and E. D. Korn. 1983. On the mechanism of actin monomer-polymer subunit exchange at steady state. J. Biol. Chem. 258: 5013-5020.
6. Carlier, M. 1991. Actin: protein structure and filament dynamics. J. Biol. Chem. 266:1-4.
7. Chik, J. K., U. Lindberg, and C. E. Schutt. 1996. The structure of an open state of beta actin at 2.65 Å resolution. J. Mol. Biol. 263:607-623.
8. Colombo, M. F., D. C. Rau, and V. A. Parsegian. 1992. Protein solvation in allosteric regulation: a water effect on hemoglobin. Science. 256: 655-659.
9. De La Cruz, E. M., and T. D. Pollard. 1995. Nucleotide-free actin: stabilization by sucrose and nucleotide binding kinetics. Biochemistry. 34:5452-5461.
10. Detmers, P., A. Weber, M. Elzinga, and R. E. Stephens. 1981. 7-Chloro-4-nitrobenzeno-2-oxa-1,3-diazole actin as a probe for actin polymerization. J. Biol. Chem. 256:99-105.
11. Drenckhahn, D., and T. D. Pollard. 1986. Elongation of actin filaments is a diffusion-limited reaction at the barbed end and is accelerated by inert macromolecules. J. Biol. Chem. 261:12754-12758.
12. Gaertner, A., G. W. Mayr, and A. Wegner. 1991. Binding of sugar phosphates, inositol phosphates and phosphorylated amino acids to actin. Eur. J. Biochem. 198:67-71.
13. Garner, M. M., and D. C. Rau. 1995. Water release associated with specific binding of gal repressor. EMBO J. 14:1257-1263.
14. Gershman, L. C., L. A. Selden, H. J. Kinosian, and J. E. Estes. 1994. Actin-bound nucleotide/divalent cation interactions. Adv. Exp. Med. Biol. 358:35-49.
15. Kabsch, W., and K. C. Holmes. 1995. The actin fold. FASEB J. 9:167-174.
16. Kabsch, W., H. Mannherz, D. Suck, E. Pai, and K. C. Holmes. 1990. Atomic structure of the actin: DNase complex. Nature. 347:37-44.
17. Kasai, M., E. Nakano, and F. Oosawa. 1965. Polymerization of actin free from nucleotides and divalent cations. Biochim. Biophys. Acta. 94: 494-503.
18. Korn, E. D., M. Carlier, and D. Pantaloni. 1987. Actin polymerization and ATP hydrolysis. Science. 238:638-644.
19. Kornblatt, J. A., M. J. Kornblatt, G. H. Bon Hoa, and A. G. Mauk. 1993. Responses of two protein-protein complexes to solvent stress: does water play a role at the interface? Biophys. J. 65:1059-1065.
20. Kouyama, T., and K. Mihashi. 1981. Fluorimetry study of N-(1-Pyrenyl)iodoacetamide-labelled F-actin. local structural change of actin protomer both on polymerization and on binding of heavy meromyosin. Eur. J. Biochem. 114:33-38.
21. Leikin, S., V. A. Parsegian, D. C. Rau, and R. P. Rand. 1993. Hydration forces. Ann. Rev. Phys. Chem. 44:369-395.
22. LiCata, V. J., and N. M. Allewell. 1997. Functionally linked hydration changes in E. coli aspartate transcarbamylase and its catalytic subunit. Biochemistry. 36:10161-10167.
23. Lorenz, M., D. Popp, and K. C. Holmes. 1993. Refinement of the F-actin model against X-ray fiber diffraction data by the use of a directed mutagen algorithm. J. Mol. Biol. 234:826-836.
24. Na, G. C. 1986. Interaction of calf skin collagen with glycerol: linked function analysis. Biochemistry. 25:967-973.
25. Na, G. C., L. J. Butz, D. G. Bailey, and R. J. Carroll. 1986. In vitro collagen fibril assembly in glycerol solution: evidence for a helical cooperative mechanism involving microfibrils. Biochemistry. 25:958-966.
26. Na, G. C., and S. N. Timasheff. 1981. Interaction of calf brain tubulin with glycerol. J. Mol. Biol. 151:165-178.
27. Oosawa, F., and S. Higashi. 1967. Statistical thermodynamics of polymerization and polymorphism of protein. Prog. Theor. Biol. 1:79-164.
28. Oosawa, F., and M. Kasai. 1971. Actin. In Biological Macromolecules. Vol. 5, Subunits in Biological Systems. S. N. Timasheff and G. D. Fasman, editors. Marcel Dekker, New York. 261-322.
29. Orlova, A., X. Chen, P. A. Rubenstein, and E. H. Egelman. 1997. Modulation of yeast F-actin structure by a mutation in the nucleotide-binding cleft. J. Mol. Biol. 271:235-243.
30. Pantaloni, D., M. Carlier, M. Coue, A. A. Lal, S. L. Brenner, and E. D. Korn. 1984. The critical concentration of actin in the presence of ATP increases with the number concentration of filaments and approaches the critical concentration of actin-ADP. J. Biol. Chem. 259:6274-6283.
31. Pardee, J. D., and J. A. Spudich. 1982. Purification of muscle actin. Meth. Cell Biol. 24:271-289.
32. Parsegian, V. A., R. P. Rand, and D. C. Rau. 1995. Macromolecules and water: probing with osmotic stress. Methods Enzymol. 259:43-94.
33. Reid, C. 1995. The influence of water on the glucose affinity of hexokinase. Thesis. Biological Sciences. Brock University, St. Catharines, Canada. 162 pp.
34. Reid, C., and R. P. Rand. 1997. Probing protein hydration and conformational states in solution. Biophys. J. 72:1022-1030.
35. Timasheff, S. N. 1993. The control of protein statility and association by weak interactions with water: how do solvents affect these processes? Am. Rev. Biophys. Biomol. Struct. 22:67-97.
36. Tobacman, L. S., and E. D. Korn. 1982. The regulation of actin polymerization and the inhibition of monomeric actin ATPase activity by Acanthamoeba profilin. J. Biol. Chem. 257:4166-4170.
37. Valentin-Ranc, C., and M. Carlier. 1991. Role of ATP-bound divalent metal ion in the conformation and function of actin. J. Biol. Chem. 266:7668-7675.
38. Vodyanoy, I., S. M. Bezrukov, and V. A. Parsegian. 1993. Probing alamethicin channels with water-soluble polymers: size-modulated osmotic action. Biophys. J. 65:2097-2105.
39. Wriggers, W., and K. Schulten. 1997. Stability and dynamics of G-actin: back-door water diffusion and behavior of a subdomain 3/4 loop. Biophys. J. 73:624-639.