Allelic polymorphisms and RFLP in the human immunoglobulin lambda light chain locus

Human Genetics

Volumn 104, Issue 5, 1999, Pages 361-369

  Lefranc, Marie Paule ^a   Pallarès, Nathalie ^a   Frippiat, Jean Pol ^a,b  

^a CNRS and University Montpellier II   (France)

^b UNIVERSITÉ DE LORRAINE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOGLOBULIN LAMBDA CHAIN;

EVOLUTION; GENE LOCUS; GENE SEQUENCE; GENETIC POLYMORPHISM; GENETIC VARIABILITY; HUMAN; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVIEW; SENEGAL; UNINDEXED SEQUENCE;

ALLELES; CONTINENTAL POPULATION GROUPS; DNA RESTRICTION ENZYMES; DNA TRANSPOSABLE ELEMENTS; ETHNIC GROUPS; GENES, IMMUNOGLOBULIN; HUMANS; IMMUNOGLOBULIN LAMBDA-CHAINS; PHYLOGENY; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RESTRICTION MAPPING; SEQUENCE DELETION; VARIATION (GENETICS);

EID: 0032990292     PISSN: 03406717     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004390050969     Document Type: Review

References (39)

1. Blancher A, Chuchana P, Lefranc G, Lefranc M-P (1990) HindIII restriction fragment alleles of the human immunoglobulin VλII subgroup genes. Nucleic Acids Res 18:6178
2. Blasini AM, Delgado MB, Valdivieso C, Guevara P, Ramirez JL, Stekman IL, Rodriguez MA, Williams RC Jr (1996) Restriction fragment length polymorphisms of constant region genes of immunoglobulin lambda chains in Venezuelan patients with systemic lupus erythematosus. Lupus 5:300-302
3. Chapelle A de la, Lenoir A, Boue G, Gallano P, Huerre C, Szajnert MF, Jeanpierre M, Lalouel M, Kaplan JC (1983) Lambda Ig constant region genes are translocated to chromosome 8 in a Burkitt's lymphoma (8,22). Nucleic Acids Res 11:1133-1142
4. Chothia C, Lesk AM (1987) Canonical structures for the hyper-variable regions of immunoglobulins. J Mol Biol 196:901-917
5. Chuchana P, Blancher A, Brockly F, Alexandre D, Lefranc G, Lefranc M-P (1990a) Definition of the human immunoglobulin variable lambda (IGLV) gene subgroups. Eur J Immunol 20:1317-1325
6. Chuchana P, Blancher A, Lefranc G, Lefranc M-P (1990b) HindIII RFLP of the human immunoglobulin VλIII subgroup genes. Nucleic Acids Res 18:6179
7. Chuchana P, Frippiat J-P, Blancher A, Lefranc G, Lefranc M-P (1993) Haplotypes of the human immunoglobulin lambda IGLV7S1 and IGLV1S1 genes defined by restriction-site polymorphism and insertion/deletion of a 6kb DNA fragment. Am J Hum Genet 53:518-525
8. Cook GP, Tomlinson IM (1995) The human immunoglobulin VH repertoire. Immunol Today 16:237-242
9. Dard P, Sanchez-Mazas A, Dugoujon JM, De Lange G, Langaney A, Lefranc M-P, Lefranc G (1996) DNA analysis of the immunoglobulin IGHG loci in a Mandenka population from eastern Senegal: correlation with Gm haplotypes and hypotheses for the evolution of the Ig CH region. Hum Genet 98:36-47
10. Erikson J, Martinis J, Croce CM (1981) Assignment of the genes for human λ. immunoglobulin chains to chromosome 22. Nature 294:173-175
11. Felsenstein J (1989) PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5:164-166
12. Frippiat J-P, Williams SC, Tomlinson IM, Cook GP, Cherif D, Le Paslier D, Collins JE, Dunham I, Winter G, Lefranc M-P (1995) Organization of the human immunoglobulin lambda light chain locus on chromosome 22q11.2. Hum Mol Genet 4:983-991
13. Frippiat J-P, Dard P, Marsh S, Winter G, Lefranc M-P (1997) Immunoglobulin lambda light chain orphons on human chromosome 8q11.2. Eur J Immunol 27:1260-1265
14. Ghanem N, Dariavach P, Bensmana M, Chibani J, Lefranc G, Lefranc M-P (1988) Polymorphism of immunoglobulin lambda constant region genes in populations from France, Lebanon and Tunisia. Exp Clin Immunogenet 5:186-195
15. Honda K, Kimura A, Dong RP, Tamai H, Nagato H, Nishimura Y, Sasazuki T (1993) Immunogenetic analysis of silicosis in Japan. Am J Respir Cell Mol Biol 8:106-111
16. Ignatovich O, Tomlinson IM, Jones PT, Winter G (1997) The creation of diversity in the human immunoglobulin Vλ repertoire. J Mol Biol 268:69-77
17. Imanishi T, Gojobori T (1992) Patterns of nucleotide substitutions inferred from the phylogenies of the class I major histocompatibility complex genes. J Mol Evol 35:196-204
18. Kawasaki K, Minoshima S, Mine E, Shibuya K, Shintani A, Schmeits JL, Wang J, Shimizu N (1997) One-megabase sequence analysis of the human immunoglobulin lambda gene locus. Genome Res 7:250-261
19. Kay PH, Moriuchi J, Ma PJ, Saueracker E (1992) An unusual allelic form of the immunoglobulin lambda constant region genes in the Japanese. Immunogenetics 35:341-343
20. Lalouel JM, Langaney A (1976) Bedik and Niokholonko of Senegal: intervillage relationship inferred from migration data. Am J Phys Anthropol 45:453-466
21. Langaney A, Gomila J (1973) Bedik and Niokholonko: intra- and inter-ethnic migration. Hum Biol 45:137-150
22. Lefranc M-P (1998) IMGT locus on focus. A new section of experimental and clinical immunogenetics. Exp Clin Immunogenet 15:1-7
23. Lefranc M-P, Giudicelli V, Busin C, Bodmer J, Müller W, Bontrop R, Lemaitre M, Malik A, Chaume D (1998) IMGT, the internaional ImMunoGeneTics database. Nucleic Acids Res 26: 299-305
24. Nagaoka H, Ozawa K, Matsuda F, Hayashida H, Matsumara R, Haino M, Shin EK, Fukita Y, Imai T, Anand R, Yokoyama K, Eki T, Doeda E, Honjo T (1994) Recent translocation of variable and diversity segments of the human immunoglobulin heavy chain from chromosome 14 to chromosome 15 and 16. Genomics 22:189-197
25. Nishi H, Kimura A, Fukuta S, Kusukawa R, Kawamura K, Nimura Y, Nagano M, Yasuda H, Kawai C, Sugimoto T, Okada R, Yazaki Y, Tanaka H, Harumi K, Koga Y, Sasazuki T, Toshima H (1992) Genetic analysis of dilated cardiomyopathy: HLA and immunoglobulin genes may confer susceptibility. Jpn Circ J 56:1054-1061
26. Paul E, Livneh A, Manheimer-Lory AJ, Diamond B (1991) Characterization of the human Ig VλII gene family and analysis of VλII and Cλ polymorphism in systemic lupus erythematosus. J Immunol 147:2771-2776
27. Reynaud C-A, Mackay CR, Müller RG, Weill J-C (1991) Somatic generation of diversity in a mammalian primary lymphoid organ: the sheep ileal Peyer's patches. Cell 64:995-1005
28. Sheehan KM, Mainville CA, Willert S, Brodeur PH (1993) The utilization of individual VH exons in the primary response of adult BALB/c mice. J Immunol 151:5364-5375
29. Sidebottom D, Grennan DM, Sanders PA, Read A (1987) Immunoglobulin lambda light chain genes in rheumatoid arthritis. Ann Rheum Dis 46:587-589
30. Sidebottom D, Bate AS, Grennan DM (1993) Lack of association between immunoglobulin light chain constant and variable region polymorphisms (CK, VKII, VλVII and VHIII) and rheumatoid arthritis. Exp Clin Immunogenet 10:129-136
31. Solomon A, Frangione B, Franklin EC (1982) Bence Jones proteins and light chains of immunoglobulins. Preferential association of the V lambda VI subgroup of human light chains with amyloidosis AL (lambda). J Clin Invest 70:453-460
32. Taub RA, Hollis GF, Hieter PA, Korsmeyer SJ, Waldmann TA, Leder P (1983) Variable amplification of immunoglobulin λ light chain genes in human populations. Nature 304:172-174
33. Tiercy JM, Sanchez-Mazas A, Excoffier L, Shi-Isaac X, Jeannet M, Mach B, Langaney A (1992) HLA-DR polymorphism in a Senegalese Mandenka population: DNA oligotyping and population genetics of DRB1 specificities. Am J Hum Genet 51:592-608
34. Tomlinson IM, Cook GP, Carter NP, Elaswarapu R, Smith S, Walter G, Buluwela L, Rabbitts TH, Winter G (1994) Human immunoglobulin VH and D segments on chromosomes 15q11.2 and 16p11.2. Hum Mol Genet 3:853-860
35. Wagner SD, Milstein C, Neuberger MS (1995) Codon bias targets mutation. Nature 376:732
36. Williams RC, Marshall NJ, Kilpatrick K, Montano J, Brickell PM, Goodall M, Ealey PA, Shine B, Weetman AP, Craig RK (1988) Kappa/lambda immunoglobulin distribution in Graves' thyroid-stimulating antibodies. J Clin Invest 82:1306-1312
37. Williams SC, Frippiat J-P, Tomlinson IM, Ignatovich O, Lefranc M-P, Winter G (1996) Sequence and evolution of the human germline V lambda repertoire. J Mol Biol 264:220-232
38. Wu S, Cygler M (1993) Conformation of complementarity determining region L1 loop in murine IgG λ light chain extends the repertoire of canonical froms. J Mol Biol 229:597-601
39. Zachau HG (1993) The immunoglobulin K locus - or what has been learned from looking closely at one-tenth of a percent of the human genome. Gene 135:167-173