Postglacial recolonization patterns and genetic relationships among whitefish (Coregonus sp.) populations in Denmark, inferred from mitochondrial DNA and microsatellite markers

Molecular Ecology

Volumn 8, Issue 2, 1999, Pages 239-252

  Hansen, M M ^a   Mensberg, K L D ^a   Berg, S ^a  

^a TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

Coregonus lavaretus; Genetic differentiation; Microsatellites; Mitochondrial DNA; Phylogeography; Postglacial recolonization

Indexed keywords

MICROSATELLITE DNA; MITOCHONDRIAL DNA; POLYMERASE CHAIN REACTION; POPULATION GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

COREGONUS LAVARETUS; COREGONUS OXYRHYNCHUS;

EID: 0032982923     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.1999.00557.x     Document Type: Article

References (47)

1. Angers B, Bernatchez L (1998) Combined use of SMM and non-SMM methods to infer fine structure and evolutionary history of closely related brook charr (Salvelinus fontinalis, Salmonidae) populations from microsatellites. Molecular Biology and Evolution, 15, 143-159.
2. Angers B, Bernatchez L, Angers A, Desgroseillers L (1995) Specific microsatellite loci for brook charr reveal strong population subdivision on a microgeographical scale. Journal of Fish Biology, 47 (Suppl. A), 177-185.
3. Avise JC (1994) Molecular Markers, Natural History and Evolution. Chapman & Hall, New York.
4. Berg S, Krog C, Muus B et al. (1996) IX. Red list of lampreys and marine fishes of the Wadden Sea. Helgoländer Meeresuntersuchungen, 50, 101-105.
5. Bernatchez L (1995) A role for molecular systematics in defining evolutionary significant units in fishes. American Fisheries Society Symposium, 17, 114-132.
6. Bernatchez L, Dodson JJ (1994) Phylogenetic relationships among palearctic and nearctic whitefish (Coregonus sp.) populations as revealed by mitochondrial DNA variation. Canadian Journal of Fisheries and Aquatic Sciences, 51 (Suppl. 1), 240-251.
7. Bernatchez L, Vuorinen JA, Bodaly RA, Dodson JJ (1996) Genetic evidence for reproductive isolation and multiple origins of sympatric trophic ecotypes of whitefish (Coregonus). Evolution, 50, 624-635.
8. Billington N, Hebert PDN (1991) Mitochondrial DNA diversity in fishes and its implications for introductions. Canadian Journal of Fisheries and Aquatic Sciences, 48 (Suppl. 1), 80-94.
9. Birky CW Jr, Maruyama T, Fuerst P (1983) An approach to population genetic and evolutionary genetic theory for genes in mitochondria and chloroplasts and some results. Genetics, 103, 513-527.
10. Bodaly RA, Vuorinen J, Ward RD, Luczynski M, Reist JD (1991) Genetic comparisons of New and Old world coregonid fishes. Journal of Fish Biology, 38, 37-51.
11. Cavalli-Sforza LL, Edwards AWF (1967) Phylogenetic analysis: models and estimation procedures. Evolution, 21, 550-570.
12. Cronin MA, Spearman WJ, Wilmot RL, Patton JC, Bickham JW (1993) Mitochondrial DNA variation in chinook (Oncorhynchus tshawytscha) and chum salmon (O. keta) detected by restriction enzyme analysis of polymerase chain reaction (PCR) products. Canadian Journal of Fisheries and Aquatic Sciences, 50, 708-715.
13. n microsatellites: a new class of genetic markers for Salmo trutta L. (brown trout). Heredity, 71, 488-496.
14. Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
15. Farris JS (1970) Methods for computing Wagner trees. Systematic Zoology, 34, 21-34.
16. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package, Version 3.5c). Department of Genetics, SK-50, University of Washington, Seattle, WA.
17. Goldstein DB, Linares AR, Cavalli-Sforza LL, Feldman MW (1995) Genetic absolute dating based on microsatellites and the origin of modern humans. Proceedings of the National Academy of Sciences of the USA, 92, 6723-6727.
18. Goldstein DB, Pollock DD (1997) Launching microsatellites: a review of mutation processes and methods of phylogenetic inference. Journal of Heredity, 88, 335-342.
19. Grøn P (1987) Saving the North Sea houting. In: (Tougaard S, Asbirk S, eds) Proceedings of the 5th International Wadden Sea Symposium, pp. 147-159. Esbjerg, Denmark.
20. Guo SW, Thompson EA (1992) Performing the exact test for Hardy-Weinberg proportion for multiple alleles. Biometrics, 48, 361-372.
21. Hansen MM, Mensberg K-LD, Rasmussen G, Simonsen V (1997) Genetic variation within and among Danish brown trout (Salmo trutta L.) hatchery strains, assessed by PCR-RFLP analysis of mitochondrial DNA segments. Aquaculture, 153, 15-29.
22. Himberg MK-J, Lehtonen H (1995) Systematics and nomenclature of coregonid fishes, particularly in Northwest Europe. Archiw für Hydrobiologie, 46, 39-47.
23. Jaarola M, Tegelström H (1995) Colonization history of north European field voles (Microtus agrestis) revealed by mitochondrial DNA. Molecular Ecology, 4, 299-310.
24. Kottelat M (1997) European freshwater fishes. An heuristic checklist of the freshwater fishes of Europe (exclusive of former USSR), with an introduction for non-systematists and comments on nomenclature and conservation. Biologia, Section Zoology, 52 (Suppl. 5), 1-271.
25. Larsen K (1980) De rindende vande. In: (Nørrevang A, Lundø J, eds) Danmarks Natur. De Ferske Vande, pp. 44-162. Politikens Forlag, Copenhagen.
26. Mantel N (1967) The detection of disease clustering and a generalised regression approach. Cancer Research, 27, 209-220.
27. Mayr E (1963) Animal Species and Evolution. Harvard University Press, Cambridge, MA.
28. McElroy D, Moran P, Bermingham E, Kornfield I (1991) REAP. The Restriction Enzyme Analysis Package. Version 4.0. Department of Zoology, Migratory Fish Research Institute and Center for Marine Studies, University of Maine, Orono.
29. Michalakis Y, Excoffier L (1996) A generic estimation of population subdivision using distances between alleles with special reference to microsatellite loci. Genetics, 142, 1061-1064.
30. Minch E (1996) Microsat. Version 1.5d. Human Population Genetics Laboratory, Department of Genetics, Stanford University.
31. Moritz C (1994) Applications of mitochondrial DNA analysis in conservation: a critical review. Molecular Ecology, 3, 401-411.
32. Nei M, Tajima F (1981) DNA polymorphism detectable by restriction endonucleases. Genetics, 97, 145-163.
33. Nielsen AV (1975) Landskabets tilblivelse. In: (Nørrevang A, Meyer TJ, eds) Danmarks Natur. Landskabernes Opståen, pp. 251-344. Politikens Forlag, Copenhagen.
34. Nielsen EE, Hansen MM, Mensberg K-LD (1998) Improved primer sequences for the mitochondrial ND1, ND3/4 and ND5/6 segments in salmonid fishes. Application to RFLP analysis of Atlantic salmon. Journal of Fish Biology, 53, 216-220.
35. Patton JC, Gallaway BJ, Fechhelm RG, Cronin MA (1997) Genetic variation of microsatellite and mitochondrial DNA markers in broad whitefish (Coregonus nasus) in the Colville and Sagavanirktok rivers in northern Canada. Canadian Journal of Fisheries and Aquatic Sciences, 54, 1548-1556.
36. Raymond M, Rousset F (1995a) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248-249.
37. Raymond M, Rousset F (1995b) An exact test for population differentiation. Evolution, 49, 1280-1283.
38. Reist JD, Maiers LD, Bodaly R, Vuorinen JA, Carmichael TJ (1998) The phylogeny of new- and old-world coregonine fishes as revealed by sequence variation in a portion of the d-loop of mitochondrial DNA. Archiw für Hydrobiologie, 50, 323-339.
39. Rice WR (1989) Analyzing tables of statistical tests. Evolution, 43, 223-225.
40. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406-425.
41. Schneider S, Kueffer J-M, Roessli D, Excoffier L (1997) Arlequin. Version 1.1. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Switzerland.
42. Siegismund HR (1995) G-STAT. Version 3.1. Genetical statistical programs for the analysis of population data. Arboretum, Royal Veterinary and Agricultural University, Hørsholm, Denmark.
43. Taggart JB, Hynes RA, Prodöhl PA, Ferguson A (1992) A simplified protocol for routine total DNA isolation from salmonid fishes. Journal of Fish Biology, 40, 963-965.
44. Takezaki N, Nei M (1996) Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics, 144, 389-399.
45. Tomiuk J, Guldbrandtsen B, Loeschcke V (1998) Population differentiation through mutation and drift - a comparison of genetic identity measures. Genetica, 102/103, 545-558.
46. Utter FM, Seeb JE, Seeb LW (1993) Complementary uses of ecological and biochemical genetic data in identifying and conserving salmon populations. Fisheries Research, 18, 59-76.
47. Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358-1370.