16S rRNA gene sequence analysis of Photobacterium damselae and nested PCR method for rapid detection of the causative agent of fish pasteurellosis

Applied and Environmental Microbiology

Volumn 65, Issue 7, 1999, Pages 2942-2946

  Osorio, Carlos R ^a,c   Collins, Matthew D ^b   Toranzo, Alicia E ^a   Barja, Juan L ^a   Romalde, Jesús L ^a  

^a Santiago de Compostela Spain   (Spain)

^b UNIVERSITY OF READING   (United Kingdom)

^c UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM IDENTIFICATION; DNA DNA HYBRIDIZATION; FISH; GENE SEQUENCE; GRAM NEGATIVE INFECTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTOBACTERIUM; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; STRAIN DIFFERENCE;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PASTEURELLA; PASTEURELLA PISCICIDA; PHOTOBACTERIUM; PHOTOBACTERIUM DAMSELAE; PHOTOBACTERIUM DAMSELAE SUBSP. DAMSELAE; PHOTOBACTERIUM DAMSELAE SUBSP. PISCICIDA; VIBRIO;

EID: 0032975728     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.65.7.2942-2946.1999     Document Type: Article

References (23)

1. Aoki, T., D. Ikeda, T. Katagiri, and I. Hirono. 1997. Rapid detection of the fish pathogenic bacterium Pasteurella piscicida by polymerase chain reaction targetting nucleotide sequences of the species-specific plasmid pZP1. Fish Pathol. 32:143-151.
2. Deveraux, J., P. Haeberli, and D. Smithies. 1984. A comprehensive set of sequence analysis programmes for the VAX. Nucleic Acids Res. 12:387-395.
3. Fouz, B., J. L. Larsen, B. Nielsen, J. L. Barja, and A. E. Toranzo. 1992. Characterization of Vibrio damsela strains isolated from turbot Scophthalmus maximus in Spain. Dis. Aquat. Org. 12:155-166.
4. Fouz, B., A. E. Toranzo, E. Marco-Noales, and C Amaro. 1998. Survival of fish virulent strains of Photobacterium damselae subsp. damselae in seawater under starvation conditions. FEMS Microbiol. Lett. 168:181-186.
5. Funke, G., C. Pascual Ramos, and M. D. Collins. 1995. Identification of some clinical strains of CDC coryneform group A-3 and A-4 bacteria as Cellulomonas hominis sp. nov. for some group A-3 strains. J. Clin. Microbiol. 33:2091-2097.
6. Gauthier, G., B. Lafay, R. Ruimy, V. Breittmayer, J. L. Nicolas, M. Gauthier, and R. Christen. 1995. Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov. Int. J. Syst. Bacteriol. 45:139-144.
7. Gerhardt, P., R. G. E. Murray, W. A. Wood, and N. R. Krieg. 1994. Methods for general and molecular bacteriology. American Society for Microbiology, Washington, D.C.
8. Hiney, M., and P. Smith. 1998. DNA-based diagnostics in aquaculture: can we overcome the problems of interpretation in the field, p. 143-159. In A. C. Barres, G. A. D. Davidson, M. P. Hiney, and D. McIntosh (ed.), Methodology in fish research. Fisheries Research Services, Aberdeen, Scotland, United Kingdom.
9. Hiney, M., M. T. Dawson, D. M. Heery, P. R. Smith, F. Gannon, and R. Powell. 1992. DNA probe for Aeromonas salmonicida. Appl. Environ. Microbiol. 58:1039-1042.
10. Holt, J. G., N. R. Krieg, P. H. A. Sneath, J. T. Staley, and S. T. Williams. 1994. Bergey's manual of determinative bacteriology, 9th ed. Williams & Wilkins, Baltimore, Md.
11. Hutson, R. A., D. E. Thompson, and M. D. Collins. 1993. Genetic interrelationships of saccharolytic Clostridium botulinum types B, E and F and related clostridia as revealed by small-subunit rRNA gene sequences. FEMS Microbiol. Lett. 108:103-110.
12. Janssen, W. A., and M. J. Surgalla. 1968. Morphology, physiology, and serology of a Pasteurella species pathogenic for white perch (Roccus americanus). J. Bacteriol. 96:1606-1610.
13. Lores, F., B. Magariños, C. R. Osorio, A. E. Toranzo, and J. L. Romalde. 1998. Accuracy of the AQUAEIA kit (BIONOR AS) for the detection of the pasteurellosis agent in diseased and carrier fish, abstr, no. S 1-5. In Abstracts of the 3rd International Symposium on Aquatic Animal Health. American Fisheries Society, Baltimore, Md.
14. Magariños, B., J. L. Romalde, I. Bandín, B. Fouz, and A. E. Toranzo. 1992. Phenotypic, antigenic and molecular characterization of Pasteurella piscicida strains isolated from fish, Appl. Environ. Microbiol. 58:3316-3322.
15. Magarinos, B., J. L. Romalde, J. L. Barja, and A. E. Toranzo. 1994. Evidence of a dormant but infective state of the fish pathogen Pasteurella piscicida in seawater and sediment. Appl. Environ. Microbiol. 60:180-186.
16. Magariños, B., A. E. Toranzo, and J. L. Romalde. 1996. Phenotypic and pathobiological characteristics of Pasteurella piscicida. Annu. Rev. Fish Dis. 6:41-64.
17. Magariños, B., C. R. Osorio, A. E. Toranzo, and J. L. Romalde. 1997. Applicability of Ribotyping for intraspecific classification and epidemiological studies of Pasteurella piscicida. Syst. Appl. Microbiol. 20:634-639.
18. Osorio, C. R., J. L. Romalde, J. L. Barja, M. D. Collins, and A. E. Toranzo. 1998. PCR-based detection of fish pasteurellosis, abstr. no. S 1-6. In Abstracts of the 3rd International Symposium on Aquatic Animal Health. American Fisheries Society, Baltimore, Md.
19. Romalde, J. L., and B. Magariños. 1997. Immunization with bacterial antigens: pasteurellosis. p. 167-177. In R. Gudding, A. Lillehaug, P. T. Midtling, and F. Brown (ed.), Fish vaccinology. Karger, Basel, Switzerland.
20. Snieszko, S. F., G. L. Bullock, E. Hollis, and J. G. Boone. 1964. Pasteurella sp. from an epizootic of white perch (Roccus americanus) in Chesapeake Bay tidewater areas. J. Bacteriol. 88:1814-1815.
21. Truper, H. G., and L. DeĆlari. 1997. Taxonomic note: necessary correction of epithets formed as substantives (nouns) "in apposition." Int. J. Syst. Bacteriol. 47:908-909.
22. Zhao, J., and T. Aoki. 1989. A specific DNA hybridization probe for detec-tion of Pasteurella piscicida. Dis. Aquat. Org. 7:203-210.
23. Zhao, J., and T. Aoki. 1992. Plasmid profile analysis of Pasteurella piscicida and use of a plasrnid DNA probe to identify the species. J. Aquat. Anim. Health 4:198-202.