메뉴 건너뛰기




Volumn 49, Issue 1, 1999, Pages 84-97

Coevolution of PERB11 (MIC) and HLA class I genes with HERV-16 and retroelements by extended genomic duplication

Author keywords

Coevolution; HERV 16; HLA genes; PERB11 (MIC); Retroelements; Segmental duplication

Indexed keywords

ANIMAL CELL; ARTICLE; CHROMOSOME BREAKAGE; CLUSTER ANALYSIS; GENE CONVERSION; GENE DUPLICATION; GENETIC ANALYSIS; GENETIC ORGANIZATION; MAJOR HISTOCOMPATIBILITY COMPLEX; MOLECULAR EVOLUTION; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; PSEUDOGENE; TANDEM REPEAT; TRANSPOSON;

EID: 0032975027     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/PL00006537     Document Type: Article
Times cited : (59)

References (40)
  • 1
    • 0028198760 scopus 로고
    • A second lineage of mammalian major histocompatibility complex class I genes
    • Bahram S, Bresnahan M, Geraghty DE, Spies T (1994) A second lineage of mammalian major histocompatibility complex class I genes. Proc Natl Acad Sci USA 91:6259-6263
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 6259-6263
    • Bahram, S.1    Bresnahan, M.2    Geraghty, D.E.3    Spies, T.4
  • 3
    • 0032958440 scopus 로고    scopus 로고
    • Genomics of the major histocompatibilily complex: Haplotypes, retroviruses and disease
    • Dawkins R, Leelayuwat C, Gaudieri S, et al. (1999) Genomics of the major histocompatibilily complex: Haplotypes, retroviruses and disease. Immunol Rev 167:275-304
    • (1999) Immunol Rev , vol.167 , pp. 275-304
    • Dawkins, R.1    Leelayuwat, C.2    Gaudieri, S.3
  • 4
    • 0026584867 scopus 로고
    • A continuous restriction map from HLA-E to HLA-F. Structural comparison between different HLA-A haplotypes
    • El Kahloun A, Vernet C, Jouanolle A-M, et al. (1992) A continuous restriction map from HLA-E to HLA-F. Structural comparison between different HLA-A haplotypes. Immunogenetics 35:183-189
    • (1992) Immunogenetics , vol.35 , pp. 183-189
    • El Kahloun, A.1    Vernet, C.2    Jouanolle, A.-M.3
  • 5
    • 0027403573 scopus 로고
    • Localization of seven new genes around the HLA-A locus
    • El Kahloun A, Chauvel B, Mauvieux V, et al. (1993) Localization of seven new genes around the HLA-A locus. Hum Mol Genet 2:55-60
    • (1993) Hum Mol Genet , vol.2 , pp. 55-60
    • El Kahloun, A.1    Chauvel, B.2    Mauvieux, V.3
  • 6
    • 0030844186 scopus 로고    scopus 로고
    • HLA class II alleles in amerindian populations: Implications for evolution of HLA polymorphism and the colonization of the american
    • Erlich HA, Mack SJ, Bergstrom T, Gyllensten UB (1997) HLA class II alleles in Amerindian populations: Implications for evolution of HLA polymorphism and the colonization of the American. Heriditas 127:19-24
    • (1997) Heriditas , vol.127 , pp. 19-24
    • Erlich, H.A.1    Mack, S.J.2    Bergstrom, T.3    Gyllensten, U.B.4
  • 7
    • 0030829221 scopus 로고    scopus 로고
    • Duplication and polymorphism in the MHC: Alu generated diversity and polymorphism within the PERB11 gene family
    • Gaudieri S, Giles K, Kulski J, Dawkins R (1997a) Duplication and polymorphism in the MHC: Alu generated diversity and polymorphism within the PERB11 gene family. Hereditas 127:37-46
    • (1997) Hereditas , vol.127 , pp. 37-46
    • Gaudieri, S.1    Giles, K.2    Kulski, J.3    Dawkins, R.4
  • 8
    • 0031025407 scopus 로고    scopus 로고
    • Genomic characterisation of the region between HLA-B and TNF: Implication for the evolution of multicopy gene families
    • Gaudieri S, Leelayuwat C, Townend DC, Kulski JK, Dawkins RL (1997b) Genomic characterisation of the region between HLA-B and TNF: Implication for the evolution of multicopy gene families. J Mol Evol 44 (Suppl 1):S147-S154
    • (1997) J Mol Evol , vol.44 , Issue.SUPPL. 1
    • Gaudieri, S.1    Leelayuwat, C.2    Townend, D.C.3    Kulski, J.K.4    Dawkins, R.L.5
  • 9
    • 0026669901 scopus 로고
    • The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments
    • Geraghty DE, Koller BH, Hansen JA, Orr HT (1992) The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. J Immunol 149:1934-1946
    • (1992) J Immunol , vol.149 , pp. 1934-1946
    • Geraghty, D.E.1    Koller, B.H.2    Hansen, J.A.3    Orr, H.T.4
  • 10
    • 0028909092 scopus 로고
    • Origin and evolution of HLA class I pseudogenes
    • Hughes AL (1995) Origin and evolution of HLA class I pseudogenes. Mol Biol Evol 12:247-258
    • (1995) Mol Biol Evol , vol.12 , pp. 247-258
    • Hughes, A.L.1
  • 11
    • 0024390910 scopus 로고
    • Ancient interlocus exchange in the history of the HLA-A locus
    • Hughes AL, Nei M (1989) Ancient interlocus exchange in the history of the HLA-A locus. Genetics 122:681-686
    • (1989) Genetics , vol.122 , pp. 681-686
    • Hughes, A.L.1    Nei, M.2
  • 12
    • 0028861735 scopus 로고
    • Ubiquitous, mammalian-wide interspersed repeats (MIR) are molecular fossils from the mesozoic era
    • Jurka J, Zietkiewicz E, Labuda D (1995) Ubiquitous, mammalian-wide interspersed repeats (MIR) are molecular fossils from the mesozoic era. Nucleic Acids Res 23:17-175
    • (1995) Nucleic Acids Res , vol.23 , pp. 17-175
    • Jurka, J.1    Zietkiewicz, E.2    Labuda, D.3
  • 13
    • 0030441462 scopus 로고    scopus 로고
    • Identification of new medium reiteration frequency repeats in the genomes of Primates, Rodentia and Lagomorpha
    • Jurka J, Kapitonov VV, Klonowski P, Walichiewicz J, Smit AFA (1996a) Identification of new medium reiteration frequency repeats in the genomes of Primates, Rodentia and Lagomorpha. Genetica 98:235-247
    • (1996) Genetica , vol.98 , pp. 235-247
    • Jurka, J.1    Kapitonov, V.V.2    Klonowski, P.3    Walichiewicz, J.4    Smit, A.F.A.5
  • 14
    • 0030094146 scopus 로고    scopus 로고
    • CENSOR - A program for identification and elimination of repetitive elements from DNA sequences
    • Jurka J, Klonowski P, Dagman V, Pelton P (1996b) CENSOR - A program for identification and elimination of repetitive elements from DNA sequences. Comp Chem 20:119-121
    • (1996) Comp Chem , vol.20 , pp. 119-121
    • Jurka, J.1    Klonowski, P.2    Dagman, V.3    Pelton, P.4
  • 15
    • 0030045979 scopus 로고    scopus 로고
    • The age of Alu subfamilies
    • Kapitonov V, Jurka J (1996) The age of Alu subfamilies. J Mol Evol 42:59-65
    • (1996) J Mol Evol , vol.42 , pp. 59-65
    • Kapitonov, V.1    Jurka, J.2
  • 16
    • 0022962920 scopus 로고
    • Evolution of the major histocompatibility complex
    • Klein J, Figueroa F (1987) Evolution of the major histocompatibility complex. CRC Crit Rev Immunol 6:295-384
    • (1987) CRC Crit Rev Immunol , vol.6 , pp. 295-384
    • Klein, J.1    Figueroa, F.2
  • 17
    • 0031848248 scopus 로고    scopus 로고
    • Evolution by gene duplication in the major histocompatibility complex
    • Klein J, Sato A, O'Huigin C (1998) Evolution by gene duplication in the major histocompatibility complex. Cytogenet Cell Genet 80: 123-127
    • (1998) Cytogenet Cell Genet , vol.80 , pp. 123-127
    • Klein, J.1    Sato, A.2    O'Huigin, C.3
  • 19
    • 0032897703 scopus 로고    scopus 로고
    • The P5 multicopy gene family in the MHC is related in sequence to human endogenous retroviruses HERV-L and HERV-16
    • Kulski JK, Dawkins RL (1999) The P5 multicopy gene family in the MHC is related in sequence to human endogenous retroviruses HERV-L and HERV-16. Immunogenetics 49:404-412
    • (1999) Immunogenetics , vol.49 , pp. 404-412
    • Kulski, J.K.1    Dawkins, R.L.2
  • 20
    • 0031437430 scopus 로고    scopus 로고
    • The evolution of MHC diversity by segmental duplication and transposition of retroelements
    • Kulski JK, Gaudieri S, Bellgard M, et al. (1997) The evolution of MHC diversity by segmental duplication and transposition of retroelements. J Mol Evol 45:599-609
    • (1997) J Mol Evol , vol.45 , pp. 599-609
    • Kulski, J.K.1    Gaudieri, S.2    Bellgard, M.3
  • 21
    • 0033000996 scopus 로고    scopus 로고
    • Comparison between two HERV-rich regions within the major histocompatibility complex
    • Kulski JK, Gaudieri S, Inoko T, Dawkins RL (1999) Comparison between two HERV-rich regions within the major histocompatibility complex. J Mol Evol 48:675-683
    • (1999) J Mol Evol , vol.48 , pp. 675-683
    • Kulski, J.K.1    Gaudieri, S.2    Inoko, T.3    Dawkins, R.L.4
  • 24
    • 0029070908 scopus 로고
    • Clustering of diverse replicated sequences in the MHC. Evidence for en bloc duplication
    • Leelayuwat C, Pinelli M, Dawkins RL (1995) Clustering of diverse replicated sequences in the MHC. Evidence for en bloc duplication. J Immunol 155:692-698
    • (1995) J Immunol , vol.155 , pp. 692-698
    • Leelayuwat, C.1    Pinelli, M.2    Dawkins, R.L.3
  • 26
    • 0027340263 scopus 로고
    • Primate origins: Plugging the gaps
    • Martin RD (1993) Primate origins: Plugging the gaps. Nature 363:223-234
    • (1993) Nature , vol.363 , pp. 223-234
    • Martin, R.D.1
  • 27
    • 0031570314 scopus 로고    scopus 로고
    • Nucleotide sequence analysis of the HLA class I region spanning the 237-kb segment around the HLA-B and -C genes
    • Mizuki N, Ando H, Kimura M, et al. (1997) Nucleotide sequence analysis of the HLA class I region spanning the 237-kb segment around the HLA-B and -C genes. Genomics 42:55-66
    • (1997) Genomics , vol.42 , pp. 55-66
    • Mizuki, N.1    Ando, H.2    Kimura, M.3
  • 28
    • 0030791307 scopus 로고    scopus 로고
    • Evolution by the birth-and-death process in multigene families of the vertebrate immune system
    • Nei M, Gu X, Sitnikova T (1997) Evolution by the birth-and-death process in multigene families of the vertebrate immune system. Proc Natl Acad Sci USA 94:7799-7806
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 7799-7806
    • Nei, M.1    Gu, X.2    Sitnikova, T.3
  • 29
    • 0029965166 scopus 로고    scopus 로고
    • Structural analysis of the HLA-A/HLA-F subregion: Precise localization of two new multigene families closely associated with the HLA class I sequences
    • Pichon L, Carn G, Bouric P, et al. (1996) Structural analysis of the HLA-A/HLA-F subregion: precise localization of two new multigene families closely associated with the HLA class I sequences. Genomics 32:236-244
    • (1996) Genomics , vol.32 , pp. 236-244
    • Pichon, L.1    Carn, G.2    Bouric, P.3
  • 30
    • 0029685023 scopus 로고    scopus 로고
    • Alu structure, origin, evolution, significance, and function of one-tenth of human DNA
    • Schmid CW (1996) Alu structure, origin, evolution, significance, and function of one-tenth of human DNA. Prog Nucleic Acids Res Mol Biol 53:283-319
    • (1996) Prog Nucleic Acids Res Mol Biol , vol.53 , pp. 283-319
    • Schmid, C.W.1
  • 31
    • 0028246851 scopus 로고
    • Structure and genetics of the partially duplicated gene RP located immediately upstream of the complement C4A and C4B genes on the HLA class III region
    • Shen L, Wu L, Sanlioglu S, et al. (1994) Structure and genetics of the partially duplicated gene RP located immediately upstream of the complement C4A and C4B genes on the HLA class III region. J Biol Chem 269:8466-8476
    • (1994) J Biol Chem , vol.269 , pp. 8466-8476
    • Shen, L.1    Wu, L.2    Sanlioglu, S.3
  • 32
    • 0032006134 scopus 로고    scopus 로고
    • Nucleotide sequencing analysis of the 146-kilobase segment around the IkBL and MICA genes at the centromeric end of the HLA class I region
    • Shiina T, Tamiya A, Oka A, et al. (1998) Nucleotide sequencing analysis of the 146-kilobase segment around the IkBL and MICA genes at the centromeric end of the HLA class I region. Genomics 47: 372-382
    • (1998) Genomics , vol.47 , pp. 372-382
    • Shiina, T.1    Tamiya, A.2    Oka, A.3
  • 33
    • 0029654258 scopus 로고
    • A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis
    • Sonnhammer EL, Durbin R (1995) A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis. Gene 167:GC1-GC10
    • (1995) Gene , vol.167
    • Sonnhammer, E.L.1    Durbin, R.2
  • 34
    • 0027174559 scopus 로고
    • Identification of a new, abundant superfamily of mammalian LTR-transposons
    • Smit AFA (1993) Identification of a new, abundant superfamily of mammalian LTR-transposons. Nucleic Acids Res 21:1863-1872
    • (1993) Nucleic Acids Res , vol.21 , pp. 1863-1872
    • Smit, A.F.A.1
  • 35
    • 0028804572 scopus 로고
    • MIRS are classic, tRNA-derived SINEs that amplified before the mammalian radiation
    • Smit AFA, Riggs AD (1995) MIRS are classic, tRNA-derived SINEs that amplified before the mammalian radiation. Nucleic Acids Res 23:98-102
    • (1995) Nucleic Acids Res , vol.23 , pp. 98-102
    • Smit, A.F.A.1    Riggs, A.D.2
  • 36
    • 0029991222 scopus 로고    scopus 로고
    • Tiggers and other DNA transposon fossils in the human genome
    • Smit AFA, Riggs AD (1996) Tiggers and other DNA transposon fossils in the human genome. Proc Natl Acad Sci USA 93:1443-1448
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 1443-1448
    • Smit, A.F.A.1    Riggs, A.D.2
  • 37
    • 0028095315 scopus 로고
    • Mapping and characterization of non-HLA multigene assemblages in the human MHC class I region
    • Venditti CP, Harris JM, Geraghty DE, Chorney MJ (1994) Mapping and characterization of non-HLA multigene assemblages in the human MHC class I region. Genomics 22:257-266
    • (1994) Genomics , vol.22 , pp. 257-266
    • Venditti, C.P.1    Harris, J.M.2    Geraghty, D.E.3    Chorney, M.J.4
  • 38
    • 0027414767 scopus 로고
    • A novel coding sequence belonging to a new multicopy gene family mapping within the human MHC class I region
    • Vernet C, Ribouchon MT, Chimini G, Jouanolle AM, Sidibe I, Pontarotti P (1993) A novel coding sequence belonging to a new multicopy gene family mapping within the human MHC class I region. Immunogenetics 38:47-53
    • (1993) Immunogenetics , vol.38 , pp. 47-53
    • Vernet, C.1    Ribouchon, M.T.2    Chimini, G.3    Jouanolle, A.M.4    Sidibe, I.5    Pontarotti, P.6
  • 39
    • 0030946139 scopus 로고    scopus 로고
    • Large-scale comparative mapping of the MHC class I region of predominant haplotypes in Japanese
    • Watanabe Y, Tokunaga K, Geraghty DE, Tadokoro K, Juji T (1997) Large-scale comparative mapping of the MHC class I region of predominant haplotypes in Japanese, Immunogenetics 46:135-141
    • (1997) Immunogenetics , vol.46 , pp. 135-141
    • Watanabe, Y.1    Tokunaga, K.2    Geraghty, D.E.3    Tadokoro, K.4    Juji, T.5
  • 40
    • 0025881197 scopus 로고
    • Segmental exchange between MHC class I genes in a higher primate:Recombination in the gorilla between the ancestor of a human non-functional gene and an A locus gene
    • Watkins DI, Chen ZW, Garber TL, Hughes AL, Levtin NL (1991) Segmental exchange between MHC class I genes in a higher primate:recombination in the gorilla between the ancestor of a human non-functional gene and an A locus gene. Immunogenetics 34:185-191
    • (1991) Immunogenetics , vol.34 , pp. 185-191
    • Watkins, D.I.1    Chen, Z.W.2    Garber, T.L.3    Hughes, A.L.4    Levtin, N.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.