In situ detection of changes in soil bacterial and fungal activities by measuring 13C incorporation into soil phospholipid fatty acids from 13C acetate

Soil Biology and Biochemistry

Volumn 31, Issue 7, 1999, Pages 1015-1020

  Arao, Tomohito ^a  

^a NATIONAL AGRICULTURAL RESEARCH CENTER   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID METABOLISM; MICROBIAL ACTIVITY;

EID: 0032953527     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0038-0717(99)00015-2     Document Type: Article

References (22)

1. Arao T., Kawaguchi A., Yamada M. Positional distribution of fatty acids in lipids of the marine diatom Phaeodactylum tricornutum. Pytochemistry. 26:1987;2573-2576.
2. Arao T., Okano S., Kanamori T. The analysis of the phospholipid fatty acids of upland light colored andosol and relationship among the size of biomass based on phospholipid fatty acid analysis, microscopical counts and chloroform fumigation-incubation. Japanese Journal of Soil Science & Plant Nutrition. 69:1998;38-46.
3. Frostegård A., Bååth E., Tunlid A. Shifts in the structure of soil microbial communities in limed forest as revealed by phospholipid fatty acid analysis. Soil Biology & Biochemistry. 25:1993;723-730.
4. Grant W.D., West A.W. Measurement of ergosterol, diaminopimelic acid and glucoseamine in soil: evaluation as indicators of microbial biomass. Journal of Microbial Methods. 6:1986;47-53.
5. Guckert J.B., Hood M.A., White D.C. Phospholipid ester-linked fatty acid profile changes during nutrient deprivation of Vibrio cholerae in the trans/cis ratio and proportions of cyclopropyl fatty acids. Applied and Environmental Microbiology. 52:1986;794-801.
6. Hamilton J.G., Comai K. Rapid separation of neutral lipids, free fatty acids and polar lipids using prepacked silica sep-pak columns. Lipids. 23:1988;1146-1149.
7. Harwood, J.L., Russel, N.J., 1984. 3. Distribution of Lipids, 4. Biosynthesis. In: Lipids in Plants and Microbes. Allen and Unwin, London, pp. 35-117.
8. Hayano K., Tubaki K. Origin and properties of β-glucosidase activity of tomato-field soil. Soil Biology & Biochemistry. 17:1985;553-557.
9. Jantzen E., Kvalheim O.M., Hauge T.A., Hagen N., Bövre K. Grouping of bacteria by Simica pattern recognition on gas chromatographic lipid data: patterns among Moraxella and rod-shaped Neisseria. Systematic and Applied Microbiology. 9:1987;142-150.
10. Kaneda T. Iso- and anteiso-fatty acids in bacteria: biosynthesis, function and taxonomic significance. Microbiological Reviews. 55:1991;288-302.
11. Kroppensted, R.M., 1985. Fatty acid and menaquinone analysis of actinomycetes and related organisms. In: Chemical Methods in Bacterial Systematics. Academic Press, London, pp. 173-199.
12. Lösel, D.M., 1988. Fungal lipids. In: Ratledge, C., Wilkinson, S.G. (Eds.), Microbial Lipids, Vol. 1. Academic Press, London, pp. 699-806.
13. Okuyama H., Okajima N., Sasaki S., Higashi S., Murata N. The cis/trans isomerization of the double bond of a fatty acid as a strategy for adaptation to change in ambient temperature in the psychrophilic bacterium, Vibrio sp. strain ABE-1. Biochimica Biophysica Acta. 1084:1991;13-20.
14. Schallenberg M., Kalff J., Rasmussen J.B. Solutions to problems in enumerating sediment bacteria by direct counts. Applied and Environmental Microbiology. 55:1989;1214-1219.
15. Stead D.E., Sellwood J.E., Wilson J., Viney I. Evaluation of a commercial microbial identification system based on fatty acid profiles for rapid, accurate identification of plant pathogenic bacteria. Journal of Applied Bacteriology. 72:1992;315-321.
16. 14C -labelled phosphatidyl choline in soil Soil Biology & Biochemistry. 15:1983;145-148.
17. Tunlid, A., White, D.C., 1992. Biochemical analysis of biomass, community structure, nutritional status and metabolic activity of microbial communities in soil. In: Stotzky, G., Bollag, J.M. (Eds.), Soil Biochemistry, Vol.7. Marcel Dekker, New York, pp. 229-262.
18. White D.C., Tucker A.N. Phospholipid metabolism during bacterial growth. Journal of Lipid Research. 10:1969;220-233.
19. White D.C., Davis W.M., Nickels J.S., King J.D., Bobbie R.J. Determination of the sedimentary microbial biomass by extractable lipid phosphate. Oecologia. 40:1979;51-62.
20. White D.C., Bobbie R.J., Nickels J.S., Fazio S.D., Davis W.M. Nonselective biochemical methods for the determination of fungal mass and community structure in estuarine detrial microflora. Botanica Marina. 23:1980;239-250.
21. Zelles L., Bai Q.Y., Rackwits R., Chadwick D., Beese F. Determination of phospholipid- and lipopolysaccharide-derived fatty acids as an estimate of microbial biomass and community structures in soils. Biology and Fertility of Soils. 19:1995;115-123.
22. Zelles L., Palojarvi A., Kandeler E., Lutzow M.V., Winter K., Bai Q.Y. Changes in soil microbial properties and phospholipid fatty acid fractions after chloroform fumigation. Soil Biology & Biochemistry. 29:1997;1325-1336.