HIV type 1 env subtype E in Cambodia

AIDS Research and Human Retroviruses

Volumn 15, Issue 1, 1999, Pages 91-94

  Kusagawa, Shigeru ^a,b   Sato, Hironori ^a   Kato, Kayoko ^a   Nohtomi, Kyoko ^a   Shiino, Teiichiro ^a   Samrith, Chhuon ^c   Leng, Hor Bun ^c   Phalla, Tia ^c   Heng, Mam Bun ^c   Takebe, Yutaka ^a  

^a NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

^b MIE UNIVERSITY   (Japan)

^c Ministry of Health Cambodia   (Cambodia)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS ENVELOPE PROTEIN;

ARTICLE; CAMBODIA; CLINICAL ARTICLE; DISEASE TRANSMISSION; FEMALE; GENE AMPLIFICATION; GENETIC VARIABILITY; HUMAN; HUMAN CELL; HUMAN IMMUNODEFICIENCY VIRUS 1; INFECTION RISK; MALE; MIGRATION; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEROPREVALENCE;

ADULT; AMINO ACID SEQUENCE; CAMBODIA; DNA, VIRAL; FEMALE; GENES, ENV; HIV ENVELOPE PROTEIN GP120; HIV INFECTIONS; HIV-1; HUMANS; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

EID: 0032926011     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/088922299311772     Document Type: Article

References (20)

1. World Health Organization Western Pacific Region: HIV/AIDS trends, HIV sentinel surveillance, estimates of HIV infection. STD HIV AIDS Surv Rep 1996;7:1-5.
2. Phalla T, Leng HB, Mills S, Bennett A, Wienrawee P, Gorbach P, and Chin J: HIV and STD epidemiology, risk behaviors, and prevention and care response in Cambodia. AIDS 1998;12(Suppl. B):S11-S18.
3. Richner B, Laurent D, Sunnarat Y, Bee D, and Nadal D: Spread of HIV-1 to children in Cambodia. Lancet 1997;349:1451-1452.
4. Weniger BG, Takebe Y, Ou C-Y, and Yamazaki S: The molecular epidemiology of HIV in Asia. AIDS 1994;8(Suppl. 2):S13-S28.
5. Porter KR, Mascola JR, Hupudio H, Ewing D, VanCott TC, Anthony RL, Corwin AL, Widodo S, Ertono S, McCutchan FE, Burke DS, Hayes CG, Wignall FS, and Graham RR: Genetic, antigenic and serologic characterization of human immunodeficiency virus type 1 from Indonesia. J Acquir Immune Defic Syndr Hum Retrovirol 1997;14:1-6.
6. Soeprapto W, Ertono S, Hudoyo H, Mascola J, Porter K, Gunawan S, and Corwin AL: HIV and peacekeeping operations in Cambodia. Lancet 1995;346:1304-1305.
7. Lasky M, Perret JL, Peeters M, Bibollet RF, Liegeois F, Patrel D, Molinier S, Gras C, and Delaporte E: Presence of multiple non-B subtypes and divergent subtype B strains of HIV-1 in individuals infected after overseas deployment. AIDS 1997;11:43-51.
8. Artenstein AW, Coppola J, Brown AE, Carr JK, Sanders BE, Galbarini E, Mascola JR, VanCott TC, Schonbrood P, McCutchan FE, and Burke DS: Multiple introductions of HIV-1 subtype E into the western hemisphere. Lancet 1995;346:1197-1198. [Errata corrected in 1995;346:1376]
9. Kusagawa S, Sato H, Watanabe S, Nohtomi K, Kato K, Shiino T, Thwe M, Oo KY, Lwin S, Kywe B, Mra R, Yamazaki S, and Takebe Y: Genetic and serologic characterization of HIV type 1 prevailing in Myanmar (Burma). AIDS Res Hum Retroviruses 1998;14:1379-1385.
10. Thompson JD, Higgins DG, and Gibson TJ: CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994;22:4673-4680.
11. Saitou N and Nei M: The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 1997;4: 406-425.
12. Kimura M: A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980;16:111-120.
13. Myers G, Korber B, Hahn BH, Jeang K-T, Mellors JW, McCutchan FE, Henderson LE, and Pavlakis GN: Human Retroviruses and AIDS 1995. Los Alamos National Laboratory, Los Alamos, New Mexico, 1995.
14. Felsenstein J: Confidence limits on phylogenies: An approach using the bootstrap. Evolution 1985;39:783-791.
15. Pau CP, Lee TS, Auwanit W, George JR, Ou CY, Parekh BS, Granade TC, Holloman DL, Phillips S, Schochetman G, Young NL, Takebe Y, Gayle HD, and Weniger BG: Highly specific V3 peptide enzyme immunoassay for serotyping HIV-1 specimens from Thailand. AIDS 1993;7:337-340.
16. Ou CY, Takebe Y, Weniger BG, Luo CC, Kalish ML, Auwanit W, Yamazaki S, Gayle HD, Young NL, and Schochetman G: Independent introduction of two major HIV-1 genotypes into distinct high-risk populations in Thailand. Lancet 1993; 341:1171-1174.
17. Kalish ML, Baldwin A, Raktham S, Wasi C, Luo CC, Schochetman G, Mastro TD, Young N, Vanichseni S, Rubsamen WH, von Briesen H, Mullins JI, Delwart E, Herring B, Esparza J, Heyward WL, and Osmanov S: The evolving molecular epidemiology of HIV-1 envelope subtypes in injecting drug users in Bangkok, Thailand: Implications for HIV vaccine trials. AIDS 1995;9:851-857.
18. Subbarao S, Limpakarnjanarat K, Mastro TD, Bhumisawasdi J, Warachit P, Jayavasu C, Young NL, Luo CC, Shaffer N, Kalish ML, and Schochetman G: HIV type 1 in Thailand, 1994-1995: Persistence of two subtypes with low genetic diversity. AIDS Res Hum Retroviruses 1998;14:319-327.
19. Menu E, Truong TX, Lafon ME, Nguyen TH, Muller TM, Nguyen TT, Deslandres A, Chaouat G, Duong QT, Ha BK, Fleury HJ, and Barre SF: HIV type 1 Thai subtype E is predominant in South Vietnam. AIDS Res Hum Retroviruses 1996;12:629-633.
20. Nerurkar VR, Nguyen HT, Dashwood WM, Hoffmann PR, Yin C, Morens DM, Kaplan AH, Detels R, and Yanagihara R: HIV type 1 subtype E in commercial sex workers and injection drug users in southern Vietnam. AIDS Res Hum Retroviruses 1996; 12:841-843.