SMART: Identification and annotation of domains from signalling and extracellular protein sequences

Nucleic Acids Research

Volumn 27, Issue 1, 1999, Pages 229-232

  Ponting, Chris P ^a,c   Schultz, Jörg ^b   Milpetz, Frank ^b   Bork, Peer ^b  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^c NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN; SIGNAL PEPTIDE;

AMINO ACID SEQUENCE; CELLULAR DISTRIBUTION; DATA BASE; INTERNET; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN TERTIARY STRUCTURE; SHORT SURVEY;

AMINO ACID SEQUENCE; DATABASES, FACTUAL; INFORMATION STORAGE AND RETRIEVAL; INTERNET; MEMBRANE PROTEINS; PROTEIN SORTING SIGNALS; PROTEIN STRUCTURE, TERTIARY; PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL TRANSDUCTION; USER-COMPUTER INTERFACE;

EID: 0032919370     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.1.229     Document Type: Short Survey

References (26)

1. Schultz, J., Milpetz, F., Bork, P. and Ponting, C.P. (1998) Proc. Natl Acad. Sci. USA, 95, 5857-5864.
2. Bork, P. and Koonin, E.V. (1998) Nature Genet., 18, 313-318.
3. Bork, P., Schultz, J. and Ponting, C.P. (1997) Trends Biochem. Sci., 22, 296-298.
4. Bork, P., Downing, A.K., Kieffer, B. and Campbell, I.D. (1996) Q. Rev. Biophys., 29, 119-167.
5. McEntyre, J. (1998) Trends Genet., 14, 39-40.
6. Laskowski, R.A., Hutchinson, E.G., Mitchie, A.D., Wallace, A.C., Jones, M.L. and Thornton, J.M. (1997) Trends Biochem. Sci., 22, 488-490.
7. Sonnhammer, E.L.L., Eddy, S.R., Birney, E., Bateman, A. and Durbin, R. (1998) Nucleic Acids Res., 26, 320-322.
8. Henikoff, S., Pietrokovski, S. and Henikoff, J.G. (1998) Nucleic Acids Res., 26, 309-312.
9. Bairoch, A., Bucher, P. and Hofmann, K. (1997) Nucleic Acids Res., 25, 217-221.
10. Thompson, J.D., Higgins, D.G. and Gibson,T.J. (1994) Nucleic Acids Res., 22, 4673-4680.
11. Bork, P. and Gibson, T.J. (1996) Methods Enzymol., 266, 162-184.
12. Birney, E., Thompson, J.D. and Gibson, T.J. (1996) Nucleic Acids Res., 24, 2730-2739.
13. Eddy, S.R., Mitchison, G. and Durbin, R.J. (1995) J. Comput. Biol., 2, 9-23.
14. Altschul, S.F. and Gish, W. (1996) Methods Enzymol., 266, 460-480.
15. Nielsen, H., Engelbrech, J., Brunak, S. and von Heijne, G. (1997) Protein Engng., 10, 1-6.
16. Lupas, A., Van Dyke, M. and Stock, J. (1991) Science, 252, 1162-1164.
17. Wootton, J.C. and Federhen, S. (1996) Methods Enzymol., 266, 554-573.
18. von Heijne, G. (1992) J. Mol. Biol., 225, 487-494.
19. Yuan, Y., Eulenstein, O., Vingron, M. and Bork, P. (1998) Bioinformatics, 14, 285-289.
20. Gomperts, S.N. (1996) Cell. 84, 659-662.
21. Fabian, P., Murvai, J., Hatsagi, Z., Vlahovicek, K., Hegyi, H. and Pongor, S. (1997) Nucleic Acids Res., 25, 240-243. http://www2.icgeb.trieste.il/∼sbasesrv/
22. Doerks, T., Bairoch, A. and Bork, P. (1998) Trends Genet., 14, 248-250.
23. Eisenhaber, F. and Bork, P. (1998) Trends Cell Biol., 8, 169-170.
24. Ohkawa, H., Ostell, J. and Bryant, S. (1995) ISMB, 3, 259-267.
25. Bork, P. (1992) Curr. Opin. Struct. Biol., 2, 413-421.
26. Attwood, T.K., Beck, M.E., Flower, D.R., Scordis, P. and Selley, J.N. (1998) Nucleic Acids Res., 26, 304-308.