RNA-binding and capping activities of proteins in rotavirus open cores

Journal of Virology

Volumn 73, Issue 2, 1999, Pages 1382-1391

  Patton, John T ^a   Chen, Dayue ^a  

^a NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; NUCLEOTIDE; NUCLEOTIDYLTRANSFERASE; RNA BINDING PROTEIN; TRANSCRIPTION FACTOR; TRANSFERASE;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; ENZYME ACTIVATION; ENZYME ACTIVITY; ENZYME BINDING; GASTROENTERITIS; GENOME; PRIORITY JOURNAL; RNA BINDING; RNA PROBE; ROTAVIRUS; STRUCTURE ACTIVITY RELATION; VIRION; VIRUS TRANSCRIPTION;

EID: 0032903494     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.73.2.1382-1391.1999     Document Type: Article

References (36)

1. Bican, P., J. Cohen, A. Charpilienne, and R. Scherrer. 1982. Purification and characterization of bovine rotavirus cores. J. Virol. 43:1113-1117.
2. Boyle, J. F., and K. V. Holmes. 1986. RNA-binding proteins of bovine rotavirus. J. Virol. 51:561-568.
3. Chen, D., and J. T. Patton. 1998. Rotavirus RNA replication requires a single-stranded 3′ terminus for efficient minus-strand synthesis. J. Virol. 72:7387-7396.
4. Chen, D., and J. T. Patton. Unpublished data.
5. Chen, D. Y., C. Q.-Y. Zeng, M. J. Wentz, M. Gorziglia, M. K. Estes, and R. F. Ramig. 1994. Template-dependent, in vitro replication of rotavirus RNA. J. Virol. 68:7030-7039.
6. Cho, E.-J., T. Takagi, C. R. Moore, and S. Buratowski. 1997. mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain. Genes Dev. 11:3319-3326.
7. Cohen, J. 1977. Ribonucleic acid polymerase activity associated with purified calf rotavirus. J. Gen. Virol. 36:395-402.
8. Cohen, J., A. Charpilienne, S. Chilmonczyk, and M. K. Estes. 1989. Nucleotide sequence of bovine rotavirus gene 1 and expression of the gene product in baculovirus. J. Virol. 170:131-140.
9. Cong, P., and S. Shuman. 1993. Covalent catalysis in nucleotidyl transfer. A KTDG motif essential for enzyme-GMP complex formation by mRNA capping enzyme is conserved at the active sites of RNA and DNA ligases. J. Biol. Chem. 268:7256-7260.
10. Desselberger, U., and M. A. McCrae. 1994. The rotavirus genome. Curr. Top. Microbiol. Immunol. 68:5945-5952.
11. Fukuhara, N., K. Nishikawa, M. Gorziglia, and A. Z. Kapikian. 1989. Nucleotide sequence of gene segment 1 of a porcine rotavirus strain. Virology 173:743-749.
12. Gallegos, C. O., and J. T. Patton. 1989. Characterization of rotavirus replication intermediates: a model for the assembly of single-shelled particles. Virology 172:616-627.
13. Imai, M., K. Akatani, N. Ikegami, and Y. Furuichi. 1983. Capped and conserved terminal structures in human rotavirus double-stranded RNA segments. J. Virol. 47:125-136.
14. Kapikian, A. Z. 1996. Overview of viral gastroenteritis. Arch. Virol. 12:7-19.
15. Labbe, M., P. Baudoux, A. Charpilienne, D. Poncet, and J. Cohen. 1994. Identification of the nucleic acid binding domain of the rotavirus VP2 protein. J. Gen. Virol. 75:3423-3430.
16. Lawton, J. A., C. Q.-Y. Zeng, S. K. Mukherjee, J. Cohen, M. K. Estes, and B. V. V. Prasad. 1997. Three-dimensional structural analysis of recombinant rotavirus-like particles with intact and amino-terminal-deleted VP2: implications for the architecture of the VP2 capsid layer. J. Virol. 71:7353-7360.
17. Liu, M., N. M. Mattion, and M. K. Estes. 1992. Rotavirus VP3 expressed in insect cells possesses guanylyltransferase activity. Virology 188:77-84.
18. Luo, Y., and S. Shuman. 1993. RNA binding properties of vaccinia virus capping enzyme. J. Biol. Chem. 268:21253-21262.
19. Mansell, E. A., and J. T. Patton. 1990. Rotavirus RNA replication: VP2, but not VP6, is necessary for viral replicase activity. J. Virol. 64:4988-4996.
20. McCrae, M. A., and J. G. McCorquodale. 1983. Molecular biology of rotaviruses. V. Terminal structure of viral RNA species. Virology 126:204-212.
21. Midthun, K., H. B. Greenberg, Y. Hoshino, A. Z. Kapikian, R. G. Wyatt, and R. M. Chanock. 1985. Reassortant rotaviruses as potential live rotavirus vaccine candidates. J. Virol. 53:949-954.
22. Mitchell, D. B., and G. W. Both. 1990. Completion of the genomic sequence of the simian rotavirus SA11: nucleotide sequences of segments 1, 2, and 3. Virology 177:324-331.
23. Patton, J. T. 1996. Rotavirus VP1 alone specifically binds to the 3′ end of viral mRNA but the interaction is not sufficient to initiate minus-strand synthesis. J. Virol. 70:7940-7947.
24. Patton, J. T., M. Wentz, J. Xiaobo, and R. F. Ramig. 1996. cis-acting signals that promote genome replication in rotavirus mRNAs. J. Virol. 70:3961-3971.
25. Patton, J. T., M. T. Jones, A. N. Kalbach, Y.-W. He, and J. Xiaobo. 1997. Rotavirus RNA polymerase requires the core shell protein to synthesize the double-stranded RNA genome. J. Virol. 71:9618-9626.
26. Pizarro, J. L., A. M. Sandino, J. M. Pizarro, J. Fernandez, and E. Spencer. 1991. Characterization of rotavirus guanylyltransferase activity associated with polypeptide VP3. J. Gen. Virol. 72:325-332.
27. Prasad, B. V. V., G. J. Wang, J. P. M. Clerx, and W. Chiu. 1988. Three-dimensional structure of rotavirus. J. Mol. Biol. 199:269-275.
28. Prasad, B. V. V., R. Rothnagel, C. Q.-Y. Zeng, J. Jakana, J. A. Lawton, W. Chiu, and M. K. Estes. 1996. Visualization of ordered genomic RNA and localization of transcriptional complexes in rotavirus. Nature 382:471-473.
29. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
30. Sandino, A. M., M. Jashes, G. Faundez, and E. Spencer. 1986. Role of the inner protein capsid on in vitro human rotavirus transcription. J. Virol. 60:797-802.
31. Sandino, A. M., J. Fernandez, J. Pizarro, M. Vasquez, and E. Spencer. 1994. Structure of rotavirus particle: interaction of the inner capsid protein VP6 with the core polypeptide VP3. Biol. Res. 27:39-48.
32. Shuman, S., Y. Liu, and B. Schwer. 1994. Covalent catalysis in nucleotidyl transfer reactions: essential motifs in Saccharomyces cerevisiae RNA capping enzyme are conserved in Schizosaccharomyces pombe and viral capping enzymes and among polynucleotide ligases. Proc. Natl. Acad. Sci. USA 91:12046-12050.
33. Shuman, S., and B. Schwer. 1995. RNA capping enzyme and DNA ligase: a superfamily of covalent nucleotide transferases. Mol. Microbiol. 17:405-410.
34. Valenzuela, S., J. Pizarro, A. M. Sandino, M. Vasquez, J. Fernandez, O. Hernandez, J. Patton, and E. Spencer. 1991. Photoaffinity labeling of rotavirus VP1 with 8-azido-ATP: identification of the viral RNA polymerase. J. Virol. 65:3964-3967.
35. Zeng, C. Q., M. K. Estes, A. Charpilienne, and J. Cohen. 1998. The N terminus of rotavirus VP2 is necessary for encapsidation of VP1 and VP3. J. Virol. 72:201-208.
36. Zeng, Q.-Y., M. J. Wentz, M. K. Estes, and R. F. Ramig. 1996. Characterization and replicase activity of double-layered and single-layered rotavirus-like particles expressed from baculovirus recombinants. J. Virol. 70:2736-2742.