메뉴 건너뛰기




Volumn 181, Issue 9, 1999, Pages 2834-2839

Purification and characterization of Thermotoga maritima endonuclease IV, a thermostable apurinic/apyrimidinic endonuclease and 3'-repair diesterase

Author keywords

[No Author keywords available]

Indexed keywords

ENDONUCLEASE; ESTERASE; ISOENZYME;

EID: 0032898304     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.181.9.2834-2839.1999     Document Type: Article
Times cited : (30)

References (48)
  • 3
    • 0024562846 scopus 로고
    • AP endonucleases and AP lyases
    • Bailly, V. and W. G. Verly. 1989. AP endonucleases and AP lyases. Nucleic Acids Res. 17:3617-3618.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 3617-3618
    • Bailly, V.1    Verly, W.G.2
  • 4
    • 0029347105 scopus 로고
    • Structure and function of apurinic/ apyrimidinic endonucleases
    • Barzilay, G., and I. D. Hickson. 1995. Structure and function of apurinic/ apyrimidinic endonucleases. Bioessays 17:713-719.
    • (1995) Bioessays , vol.17 , pp. 713-719
    • Barzilay, G.1    Hickson, I.D.2
  • 5
    • 0006639728 scopus 로고
    • Endonuclease IV of Escherichia coli is induced by paraquat. DNA damage by oxygen-derived species
    • Chan, E., and B. Weiss. 1987. Endonuclease IV of Escherichia coli is induced by paraquat. DNA damage by oxygen-derived species. Proc. Natl. Acad. Sci USA 84:3189-3193.
    • (1987) Proc. Natl. Acad. Sci USA , vol.84 , pp. 3189-3193
    • Chan, E.1    Weiss, B.2
  • 6
    • 0343879974 scopus 로고
    • Endonuclease III (nth) mutants of Escherichia coli
    • Cnnningham, R. P., and B. Weiss. 1985. Endonuclease III (nth) mutants of Escherichia coli. Proc. Natl. Asad. Svi. USA 82:474-478.
    • (1985) Proc. Natl. Asad. Svi. USA , vol.82 , pp. 474-478
    • Cnnningham, R.P.1    Weiss, B.2
  • 7
    • 0030979263 scopus 로고    scopus 로고
    • DNA glycosylases
    • Cunningham, R. P. 1997. DNA glycosylases. Mutat. Res. 383:189-196.
    • (1997) Mutat. Res. , vol.383 , pp. 189-196
    • Cunningham, R.P.1
  • 8
    • 0343319790 scopus 로고
    • Exonuclease III and endonuclease IV remove 3' blocks from DNA synthesis primers in H2Ordamaged Escherichia coli
    • Demple, B., A. Johnson, and D. Fung. 1986. Exonuclease III and endonuclease IV remove 3' blocks from DNA synthesis primers in H2Ordamaged Escherichia coli. Proc. Natl. Acad. Sci. USA 83:7731-7735.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 7731-7735
    • Demple, B.1    Johnson, A.2    Fung, D.3
  • 9
    • 0026323008 scopus 로고
    • Cloning and expression of APE, the cDNA encoding the major human apurinic endonuclease: Definition of a family of DNA repair enzymes
    • Demple, B., T. Herman, and D. S. Chen. 1991. Cloning and expression of APE, the cDNA encoding the major human apurinic endonuclease: definition of a family of DNA repair enzymes. Proc. Natl. Acad. Sci. USA 88: 11450-11454.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 11450-11454
    • Demple, B.1    Herman, T.2    Chen, D.S.3
  • 10
    • 0028342951 scopus 로고
    • Repair of oxidative damage to DNA: Enzymology and biology
    • Demple, B., and L. Harrison. 1994. Repair of oxidative damage to DNA: enzymology and biology. Annu. Rev. Biochem. 63:915-948.
    • (1994) Annu. Rev. Biochem. , vol.63 , pp. 915-948
    • Demple, B.1    Harrison, L.2
  • 11
    • 0028675314 scopus 로고
    • Reconstitution of the DNA base excision-repair pathway
    • Dianov, G., and T. Lindahl. 1994. Reconstitution of the DNA base excision-repair pathway. Curr. Biol. 4:1069-1076.
    • (1994) Curr. Biol. , vol.4 , pp. 1069-1076
    • Dianov, G.1    Lindahl, T.2
  • 12
    • 0025120572 scopus 로고
    • The enzymology of apurinic/ apyrimidinic endonucleases
    • Doetsch, P. W., and R. P. Cunningham. 1990. The enzymology of apurinic/ apyrimidinic endonucleases. Mutat. Res. 236:173-201.
    • (1990) Mutat. Res. , vol.236 , pp. 173-201
    • Doetsch, P.W.1    Cunningham, R.P.2
  • 13
    • 0024118504 scopus 로고
    • DNA deoxyribophosphodiesterase
    • Franklin, W. A., and T. Lindahl. 1988. DNA deoxyribophosphodiesterase. EMBO J, 7:3617-3622.
    • (1988) EMBO J , vol.7 , pp. 3617-3622
    • Franklin, W.A.1    Lindahl, T.2
  • 14
    • 0026751221 scopus 로고
    • Excision of 5′-terminal deoxyribose phosphate from damaged DNA is catalyzed by the Fpg protein of Escherichia coli
    • Graves, R. I., I. Felzenszwalb, J. Laval, and T. R. O'Conner. 1992. Excision of 5′-terminal deoxyribose phosphate from damaged DNA is catalyzed by the Fpg protein of Escherichia coli. J. Biol. Chem. 267:14429-14435.
    • (1992) J. Biol. Chem. , vol.267 , pp. 14429-14435
    • Graves, R.I.1    Felzenszwalb, I.2    Laval, J.3    O'Conner, T.R.4
  • 15
    • 0031744571 scopus 로고    scopus 로고
    • Hyperthermophiles and the problem of DNA instabil-ity
    • Grogan, D. W. 1998. Hyperthermophiles and the problem of DNA instabil-ity. Mol. Microbiol. 28:1043-1049.
    • (1998) Mol. Microbiol. , vol.28 , pp. 1043-1049
    • Grogan, D.W.1
  • 17
  • 18
    • 0025972738 scopus 로고
    • Its mechanism and measurement in mammalian systems
    • Halllwell, B., and O. I. Aruama. 1991. Its mechanism and measurement in mammalian systems. FEBS Lett. 281:9-19.
    • (1991) FEBS Lett. , vol.281 , pp. 9-19
    • Halllwell, B.1    Aruama, O.I.2
  • 19
    • 0021045679 scopus 로고
    • Enzyme action at 3' termini of ionizing radiation-induced DNA strand breaks
    • Henner, W. D., S. M. Grunberg, and W. A. Haseltine. 1983. Enzyme action at 3' termini of ionizing radiation-induced DNA strand breaks. J. Biol. Chem. 258:15198-15205.
    • (1983) J. Biol. Chem. , vol.258 , pp. 15198-15205
    • Henner, W.D.1    Grunberg, S.M.2    Haseltine, W.A.3
  • 20
    • 0029976603 scopus 로고    scopus 로고
    • Using CLUSTAL for multiple sequence alignments
    • Higgins, D. G., J. D. Thompson, and T. J. Gibson. 1996. Using CLUSTAL for multiple sequence alignments. Methods Enzymol. 266:383-402.
    • (1996) Methods Enzymol. , vol.266 , pp. 383-402
    • Higgins, D.G.1    Thompson, J.D.2    Gibson, T.J.3
  • 21
    • 0022310512 scopus 로고
    • Chemical changes induced in DNA by ionizing radiation
    • Hutchinson, F. 1985. Chemical changes induced in DNA by ionizing radiation. Prog. Nucleic Acid Res. Mol. Biol. 32:115-154.
    • (1985) Prog. Nucleic Acid Res. Mol. Biol. , vol.32 , pp. 115-154
    • Hutchinson, F.1
  • 22
    • 0024279616 scopus 로고
    • Yeast DNA 3′-repair diesterase is the major cellular apurinic/apyrimidinic endonuclease: Substrate specificity and kinetics
    • Johnson, A. W., and B. Demple. 1988. Yeast DNA 3′-repair diesterase is the major cellular apurinic/apyrimidinic endonuclease: substrate specificity and kinetics. J. Biol. Chem. 263:18017-18022.
    • (1988) J. Biol. Chem. , vol.263 , pp. 18017-18022
    • Johnson, A.W.1    Demple, B.2
  • 23
    • 0345693588 scopus 로고    scopus 로고
    • 9 September, last date accessed
    • Institute for Genomic Research. Preliminary T. maritma sequence data. [Online.] http://www.tigr.org. [9 September 1997, last date accessed.]
    • (1997) Preliminary T. maritma Sequence Data
  • 24
    • 0031004544 scopus 로고    scopus 로고
    • The application of circular dichroism to studies of protein folding and unfolding
    • Kelly, S. M., and N. C. Price. 1997. The application of circular dichroism to studies of protein folding and unfolding. Biochim. Biophys. Acta 1338:161-185.
    • (1997) Biochim. Biophys. Acta , vol.1338 , pp. 161-185
    • Kelly, S.M.1    Price, N.C.2
  • 25
    • 0030272402 scopus 로고    scopus 로고
    • Uracil-DNA glycosylase activities in hyperthermophilic micro-organisms
    • Koulis, A., D. A. Cowan, L. H. Pearl, and R. Saava, 1996. Uracil-DNA glycosylase activities in hyperthermophilic micro-organisms. FEMS Microbiol. Lett. 143:267-271.
    • (1996) FEMS Microbiol. Lett. , vol.143 , pp. 267-271
    • Koulis, A.1    Cowan, D.A.2    Pearl, L.H.3    Saava, R.4
  • 26
    • 0030861915 scopus 로고    scopus 로고
    • DNA glycosylases in the base excision repair of DNA
    • Krokan, H. E., R. Standal, and R. Slupphaug. 1997. DNA glycosylases in the base excision repair of DNA. Biochem. J. 325:1-16.
    • (1997) Biochem. J. , vol.325 , pp. 1-16
    • Krokan, H.E.1    Standal, R.2    Slupphaug, R.3
  • 27
    • 0023917460 scopus 로고
    • Homogeneous Escherichia coli endonuclease IV. Characterization of an enzyme that recognizes oxidative damage in DNA
    • Levin, J. D., A. W. Johnson, and B. Demple. 1988. Homogeneous Escherichia coli endonuclease IV. Characterization of an enzyme that recognizes oxidative damage in DNA. J. Biol. Chem. 263:8066-8071.
    • (1988) J. Biol. Chem. , vol.263 , pp. 8066-8071
    • Levin, J.D.1    Johnson, A.W.2    Demple, B.3
  • 28
    • 0025113010 scopus 로고
    • Analysis of class II (hydrolytic) and class I (beta-lyase) apurinic/apyrimidinic endonucleases with a synthetic DNA substrate
    • Levin, J. D., and B. Demple. 1990. Analysis of class II (hydrolytic) and class I (beta-lyase) apurinic/apyrimidinic endonucleases with a synthetic DNA substrate. Nucleic Acids Res. 18:5069-5075.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 5069-5075
    • Levin, J.D.1    Demple, B.2
  • 29
    • 0015504248 scopus 로고
    • Rate of depurination of native deoxyribonucleic acid
    • Lindahl, T., and B. Nyberg. 1972. Rate of depurination of native deoxyribonucleic acid. Biochemistiy 11:3610-3618.
    • (1972) Biochemistiy , vol.11 , pp. 3610-3618
    • Lindahl, T.1    Nyberg, B.2
  • 30
    • 0016257644 scopus 로고
    • Heat-induced deamination of cytosine residues in deoxyribonucleic acid
    • Lindahl, T., and B. Nyberg. 1974. Heat-induced deamination of cytosine residues in deoxyribonucleic acid. Biochemistiy 13:3405-3410.
    • (1974) Biochemistiy , vol.13 , pp. 3405-3410
    • Lindahl, T.1    Nyberg, B.2
  • 31
    • 0027278557 scopus 로고
    • Instability and decay of the primary structure of DNA
    • Lindahl, T. 1993. Instability and decay of the primary structure of DNA. Nature 362:709-715.
    • (1993) Nature , vol.362 , pp. 709-715
    • Lindahl, T.1
  • 32
    • 0017161630 scopus 로고
    • Methyl methane sulfonate-sensitive mutant of Escherichta coli deficient in an endonuclease specific for apurinic sites in deoxyribonucleic acid
    • Ljnngquist, S., T. Lindahl, and P. Howard-Flanders. 1976. Methyl methane sulfonate-sensitive mutant of Escherichta coli deficient in an endonuclease specific for apurinic sites in deoxyribonucleic acid. J. Bacteriol. 126:646-653.
    • (1976) J. Bacteriol. , vol.126 , pp. 646-653
    • Ljnngquist, S.1    Lindahl, T.2    Howard-Flanders, P.3
  • 33
    • 0017701231 scopus 로고
    • A new endonuclease from Escherichta coli acting at apurinic sites in DNA
    • Ljnngquist, S. 1977. A new endonuclease from Escherichta coli acting at apurinic sites in DNA. J. Biol. Chem. 252:2808-2814.
    • (1977) J. Biol. Chem. , vol.252 , pp. 2808-2814
    • Ljnngquist, S.1
  • 34
    • 0023015325 scopus 로고
    • Mutagenesis by apurinic/apyrimidinic sites
    • Loeb, L. A., and B. D. Preston. 1986. Mutagenesis by apurinic/apyrimidinic sites. Annu. Rev. Genet. 20:201-230.
    • (1986) Annu. Rev. Genet. , vol.20 , pp. 201-230
    • Loeb, L.A.1    Preston, B.D.2
  • 35
    • 0030583735 scopus 로고    scopus 로고
    • The Caenorhabditis elegans gene CeAPN1 encodes a homolog of Escherichia coli and yeast apurinic/apyrimidinic endonuclease
    • Massen, J. Y., S. Tremblay, and D. Ramofar. 1996. The Caenorhabditis elegans gene CeAPN1 encodes a homolog of Escherichia coli and yeast apurinic/apyrimidinic endonuclease. Gene 179:291-293.
    • (1996) Gene , vol.179 , pp. 291-293
    • Massen, J.Y.1    Tremblay, S.2    Ramofar, D.3
  • 36
    • 0026101901 scopus 로고
    • Stereochemical studies of the beta-elimination reactions at aldehydic abasic sites in DNA: Endonuclease III from Escherichia coli, sodium hydroxide, and Lys-Trp-Lys
    • Mazumder, A., J. A. Gerlt, M. J. Absalon. A. Stubbe, R. P. Cunningham, J. Withka, and P. H. Bolton. 1991. Stereochemical studies of the beta-elimination reactions at aldehydic abasic sites in DNA: endonuclease III from Escherichia coli, sodium hydroxide, and Lys-Trp-Lys. Biochemistry 30:1119-1126.
    • (1991) Biochemistry , vol.30 , pp. 1119-1126
    • Mazumder, A.1    Gerlt, J.A.2    Absalon, M.J.3    Stubbe, A.4    Cunningham, R.P.5    Withka, J.6    Bolton, P.H.7
  • 37
    • 0032519382 scopus 로고    scopus 로고
    • Thermostable repair enzyme for oxidative DNA damage from extremely thermophilic bacterium, Thermos thermophilus HB8
    • Mikawa, T., R. Kato, M. Sugahara, and S. Kuramitsu. 1998. Thermostable repair enzyme for oxidative DNA damage from extremely thermophilic bacterium, Thermos thermophilus HB8. Nucleic Acids Res. 26:903-910.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 903-910
    • Mikawa, T.1    Kato, R.2    Sugahara, M.3    Kuramitsu, S.4
  • 38
    • 0031296962 scopus 로고    scopus 로고
    • The apurinic-apyrimidinic endonuclease IV family of DNA repair enzymes
    • Ramotar, D. 1997. The apurinic-apyrimidinic endonuclease IV family of DNA repair enzymes. Biochem. Cell Biol. 75:327-336.
    • (1997) Biochem. Cell Biol. , vol.75 , pp. 327-336
    • Ramotar, D.1
  • 39
    • 0032481667 scopus 로고    scopus 로고
    • Schizosaccharomyces pombe apnl encodes a homologue of the Escherichia coli endonuclease IV family of DNA repair proteins
    • Ramotar, D., J. Vadnais, J. Masson, and S. Tremblay. 1998. Schizosaccharomyces pombe apnl encodes a homologue of the Escherichia coli endonuclease IV family of DNA repair proteins. Biochim. Biophys. Acta 1396:15-20.
    • (1998) Biochim. Biophys. Acta , vol.1396 , pp. 15-20
    • Ramotar, D.1    Vadnais, J.2    Masson, J.3    Tremblay, S.4
  • 41
    • 0026669836 scopus 로고
    • DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I
    • Sandigursky, M., and W. A. Franklin. 1992. DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I. Nucleic Acids Res. 20:4699-4703.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 4699-4703
    • Sandigursky, M.1    Franklin, W.A.2
  • 42
    • 0026758409 scopus 로고
    • Excision of sugarphosphate products at apurinic/apyrimidinic sites by DNA deoxyribophosphodiesterase of Escherichia coli
    • Sandigursky, M., I. Lalezari, and W. A. Franklin. 1992. Excision of sugarphosphate products at apurinic/apyrimidinic sites by DNA deoxyribophosphodiesterase of Escherichia coli. Radiat. Res. 131:332-337.
    • (1992) Radiat. Res. , vol.131 , pp. 332-337
    • Sandigursky, M.1    Lalezari, I.2    Franklin, W.A.3
  • 43
    • 0027429399 scopus 로고
    • Exonuclease I of Escherichia coli removes phosphoglycolate 3′-end groups from DNA
    • Sandigursky, M., and W. A. Franklin. 1993. Exonuclease I of Escherichia coli removes phosphoglycolate 3′-end groups from DNA. Radiat. Res. 135:229-233.
    • (1993) Radiat. Res. , vol.135 , pp. 229-233
    • Sandigursky, M.1    Franklin, W.A.2
  • 44
    • 0029929392 scopus 로고    scopus 로고
    • Protein-protein interactions between the Escherichia coli single-stranded DNA-binding protein and exonuclease I
    • Sandigursky, M., F. Mendez, R. E. Bases, T. Matsumato, and W. A. Franklin. 1996. Protein-protein interactions between the Escherichia coli single-stranded DNA-binding protein and exonuclease I. Radiat. Res. 145:619-623.
    • (1996) Radiat. Res. , vol.145 , pp. 619-623
    • Sandigursky, M.1    Mendez, F.2    Bases, R.E.3    Matsumato, T.4    Franklin, W.A.5
  • 45
    • 0023920789 scopus 로고
    • The relative importance of Escherichia coli exonuclease III and endonuclease IV for the hydrolysis of 3′-phosphoglycolate ends in polydeoxynucleotides
    • Siwek, B., S. Bricteux-Gregoire, V. Bailly, and W. G. Verly. 1988. The relative importance of Escherichia coli exonuclease III and endonuclease IV for the hydrolysis of 3′-phosphoglycolate ends in polydeoxynucleotides. Nucleic Acids Res. 16:5031-5038.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 5031-5038
    • Siwek, B.1    Bricteux-Gregoire, S.2    Bailly, V.3    Verly, W.G.4
  • 46
    • 0029119097 scopus 로고
    • Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure
    • Thayer, M., H. Ahern, D. Xing, R. P. Cunningham, and J. A. Tainer. 1995. Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure. EMBO J. 14:4108-4120.
    • (1995) EMBO J. , vol.14 , pp. 4108-4120
    • Thayer, M.1    Ahern, H.2    Xing, D.3    Cunningham, R.P.4    Tainer, J.A.5
  • 47
    • 0016651743 scopus 로고
    • Mutations simultaneously affecting endonuclease II and exonuclease III in Escherichia coli
    • Yajko, D. M., and B. Weiss. 1975. Mutations simultaneously affecting endonuclease II and exonuclease III in Escherichia coli. Proc. Natl. Acad. Sci. USA 72:688-792.
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 688-792
    • Yajko, D.M.1    Weiss, B.2
  • 48
    • 0019051753 scopus 로고
    • Apurinic/apyrimidinic endonucleases in repair of pyrimidine dimers and other lesions in DNA
    • Warner, H. R., B. F. Demple, W. A. Deutsch, C. M. Kane, and S. Linn. 1980. Apurinic/apyrimidinic endonucleases in repair of pyrimidine dimers and other lesions in DNA. Proc. Natl. Acad. Sci. USA 77:4602-4606.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 4602-4606
    • Warner, H.R.1    Demple, B.F.2    Deutsch, W.A.3    Kane, C.M.4    Linn, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.