The structure in solution of the b domain of protein disulfide isomerase

Journal of Biomolecular NMR

Volumn 13, Issue 4, 1999, Pages 357-368

  Kemmink, Johan ^a,b   Dijkstra, Klaas ^c   Mariani, Matteo ^c   Scheek, Ruud M ^c   Penka, Elke ^a   Nilges, Michael ^a   Darby, Nigel J ^a,d  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^b UNIVERSITY OF OULU   (Finland)

^c UNIVERSITY OF GRONINGEN   (Netherlands)

^d ASTRAZENECA R AND D   (Sweden)

Author keywords

Calsequestrin; Disulfide bond; Protein disulfide isomerase; Protein folding; Thioredoxin

Indexed keywords

CALSEQUESTRIN; PROTEIN DISULFIDE ISOMERASE; THIOREDOXIN;

AMINO ACID SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CATALYSIS; DISULFIDE BOND; ENDOPLASMIC RETICULUM; HUMAN; NUCLEAR MAGNETIC RESONANCE; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

EID: 0032897837     PISSN: 09252738     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1008341820489     Document Type: Article

References (60)

1. Archer, S.J., Ikura, M., Torchia, D.A. and Bax, A. (1991) J. Magn. Reson., 95, 636-641.
2. Bax, A. and Subramanian, S. (1986) J. Magn. Reson., 67, 565-569.
3. Bax, A., Clore, G.M., Driscoll, P.C., Gronenborn, A.M., Ikura, M. and Kay, L.E. (1990) J. Magn. Reson., 87, 620-627.
4. Bax, A. and Pochapsky, S.S. (1992) J. Magn. Reson., 99, 638-643.
5. Brünger, A.T. (1992) X-PLOR version 3.1. A system for X-ray crystallography and NMR, Yale University Press, New Haven, CT.
6. Cavanagh, J., Palmer, A.G., Wright, P.E. and Rance, M. (1991) J. Magn. Reson., 91, 429-436.
7. Cavanagh, J., Fairbrother, W.J., Palmer, A.G. and Skelton, N.J. (1996) Protein NMR Spectroscopy, Academic Press, San Diego, CA.
8. Clore, G.M., Bax, A. and Gronenborn, A.M. (1991) J. Biomol. NMR, 1, 13-22.
9. Creighton, T.E., Bagley, C.J., Cooper, L., Darby, N.J., Freedman, R.B., Kemmink, J. and Sheikh, A. (1993) J. Mol. Biol., 232, 1176-1196.
10. Darby, N.J. and Creighton, T.E. (1995a) Biochemistry, 34, 16770-16780.
11. Darby, N.J. and Creighton, T.E. (1995b) Biochemistry, 34, 11725-11735.
12. Darby, N.J., Kemmink, J. and Creighton, T.E. (1996) Biochemistry, 35, 10517-10528.
13. Darby, N.J., Penka, E. and Vincentelli, R. (1998) J. Mol. Biol., 276, 239-247.
14. Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J. and Bax, A. (1995) J. Biomol. NMR, 6, 277-293.
15. Edman, J.C., Ellis, L., Blacher, R.W., Roth, R.A. and Rutter, W.J. (1985) Nature, 317, 267-270.
16. Freedman, R.B., Hirst, T.R. and Tuite, M.F. (1994) Trends Biochem. Sci., 19, 331-336.
17. Gane, P.J., Freedman, R.B. and Warwicker, J. (1994) J. Mol. Biol., 249, 376-387.
18. Goldberger, R.F., Epstein, C.J. and Anfinsen C.B. (1963) J. Biol. Chem., 238, 628-635.
19. Grzesiek, S. and Bax, A. (1992a) J. Magn. Reson., 99, 201-207.
20. Grzesiek, S. and Bax, A. (1992b) J. Am. Chem. Soc., 114, 6291-6293.
21. Grzesiek, S. and Bax, A. (1992c) J. Magn. Reson., 96, 432-440.
22. Grzesiek, S. and Bax, A. (1993) J. Biomol. NMR, 3, 185-204.
23. Hawkins, H.C. and Freedman, R.B. (1991) Biochem. J., 275, 335-339.
24. Holm, L. and Sander, C. (1993) J. Mol. Biol., 233, 123-138.
25. Holm, L. and Sander, C. (1994) Nucleic Acids Res., 22, 3600-3609.
26. Holmgren, A. (1995) Structure, 3, 239-243.
27. Jeng, M.-F. and Dyson, H.J. (1996) Biochemistry, 35, 1-6.
28. Johnson, B.A. and Blevins, R.A. (1994) J. Biomol. NMR, 4, 603-614.
29. Kadkhodaei, M., Hwang, T.L., Tang, J. and Shaka, A.J. (1993) J. Magn. Reson., A105, 104-107.
30. Kallis, G.-B. and Holmgren, A. (1980) J. Mol. Biol., 255, 10261-10265.
31. Kay, L.E., Torchia, D.A. and Bax, A. (1989) Biochemistry, 28, 8972-8979.
32. Kay, L.E., Keifer, P. and Saarinen, T. (1992) J. Am. Chem. Soc., 114, 10663-10665.
33. Kay, L.E., Xu, G.Y., Singer, A.U., Muhandiram, D.R. and Forman-Kay, J.L. (1993) J. Magn. Reson., B101, 333-337.
34. Kemmink, J., Darby, N.J., Dijkstra, K., Scheek, R.M. and Creighton, T.E. (1995) Protein Sci., 4, 2587-2593.
35. Kemmink, J., Darby, N.J., Dijkstra, K., Nilges, M. and Creighton, T.E. (1996) Biochemistry, 35, 7684-7691.
36. Kemmink, J., Darby, N.J., Dijkstra, K., Nilges, M. and Creighton, T.E. (1997) Curr. Biol., 7, 239-245.
37. Klappa, P., Ruddock, L.W., Darby, N.J. and Freedman, R.B. (1998) EMBO J., 17, 927-935.
38. Kortemme, T. and Creighton, T.E. (1995) J. Mol. Biol., 253, 799-812.
39. Kraulis, P.J. (1991) J. Appl. Crystallogr., 24, 946-950.
40. Kuboniwa, H., Grzesiek, S., Delaglio, F. and Bax, A. (1994) J. Biomol. NMR, 4, 871-878.
41. Laskowski, R.A., Rullmann, J.A.C., MacArthur, M.W., Kaptein, R. and Thornton, J.M. (1996) J. Biomol. NMR, 8, 477-486.
42. Live, D.H., Davis, D.G., Agosta, W.C. and Cowburn, D. (1984) J. Am. Chem. Soc., 106, 1939-1941.
43. Lundström, J. and Holmgren, A. (1993) Biochemistry, 32, 6649-6655.
44. Marion, D., Driscoll, P.C., Kay, L.E., Wingfield, P.T., Bax, A., Gronenborn, A.M. and Clore, G.M. (1989) Biochemistry, 28, 6150-6156.
45. Martin, J.L. (1995) Structure, 3, 245-250.
46. Muhandiram, D.R., Farrow, N.A., Xu, G.-Y., Smallcombe, S.H. and Kay, L.E. (1993) J. Magn. Reson., B102, 317-321.
47. Nilges, M., Clore, G.M. and Gronenborn, A.M. (1988) FEBS Lett., 229, 317-324.
48. Nilges, M., Gronenborn, A.M. and Clore, G.M. (1987) FEBS Lett., 219, 11-16.
49. Nilges, M. (1995) J. Mol. Biol., 245, 645-660.
50. Nilges, M., Macias, M.J., O'Donoghue, S.I. and Oschkinat, H. (1997) J. Mol. Biol., 269, 408-422.
51. Palmer, A.G., Cavanagh, J., Wright, P.E. and Rance, M. (1991) J. Magn. Reson., 93, 151-170.
52. Pihlajaniemi, T., Helaakoski, T., Tasanen, K., Myllylä, R., Huhtala, M.-J., Koivu, J. and Kivirikko, K.I. (1987) EMBO J., 6, 643-649.
53. Qin, J., Clore, G.M., Kennedy, W.M.P., Huth, J.R. and Gronenborn, A.M. (1995) Structure, 3, 289-297.
54. Qin, J., Clore, G.M. and Gronenborn, A.M. (1996) Biochemistry, 35, 7-13.
55. Shaka, A.J., Lee, C.J. and Pines, A. (1988) J. Magn. Reson., 77, 274-293.
56. Tsibris, J.C.M., Hunt, L.T., Ballejo, G., Barker, W.C., Toney, L.J. and Spellacy, W.N. (1989) J. Biol. Chem., 264, 13967-13970.
57. Wang, S., Trumble, W.R., Liao, H., Wesson, C.R., Dunker, A.K. and Kang, C. (1998) Nat. Struct. Biol., 5, 476-483.
58. Wetterau, J.R., Combs, K.A., Spinner, S.N. and Joiner, B.J. (1990) J. Biol. Chem., 265, 9800-9807.
59. Yamazaki, T., Forman-Kay, J.D. and Kay, L.E. (1993) J. Am. Chem. Soc., 115, 11054-11055.
60. Zuiderweg, E.R.P. and Fesik, S.W. (1989) Biochemistry, 28, 2387-2391.