-
1
-
-
0021810948
-
The mosaic genome of warm-blooded vertebtates
-
Bernardi,G., Olofsson,B., Filipski,J., Zerial,M., Salinas,J., Cuny,G., Meunier-Rotival,M. and Rodier,F. (1985) The mosaic genome of warm-blooded vertebtates. Science, 228, 953-957.
-
(1985)
Science
, vol.228
, pp. 953-957
-
-
Bernardi, G.1
Olofsson, B.2
Filipski, J.3
Zerial, M.4
Salinas, J.5
Cuny, G.6
Meunier-Rotival, M.7
Rodier, F.8
-
2
-
-
0025861640
-
Reverse gyrase in thermophilic eubacteria
-
Bouthier de la Tour, C., Portemer, C., Huber, R., Forterre, P. and Duguet, M. (1991) Reverse gyrase in thermophilic eubacteria. J. Bacteriol., 173, 3921-3923.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 3921-3923
-
-
Bouthier De La Tour, C.1
Portemer, C.2
Huber, R.3
Forterre, P.4
Duguet, M.5
-
3
-
-
3042564838
-
Linking numbers and nucleosomes
-
Crick, F.H.C. (1976) Linking numbers and nucleosomes. Proc. Natl Acad. Sci. USA, 73, 2639-2643.
-
(1976)
Proc. Natl Acad. Sci. USA
, vol.73
, pp. 2639-2643
-
-
Crick, F.H.C.1
-
4
-
-
0000744136
-
Conformal fluctuations of DNA helix
-
Depew, R.E. and Wang, J.C. (1975) Conformal fluctuations of DNA helix. Proc. Natl Acad. Sci. USA, 72, 4275-4279.
-
(1975)
Proc. Natl Acad. Sci. USA
, vol.72
, pp. 4275-4279
-
-
Depew, R.E.1
Wang, J.C.2
-
5
-
-
0022230224
-
DNA bending and its relation to nucleosome positioning
-
Drew, H.R. and Travers, A.A. (1985) DNA bending and its relation to nucleosome positioning. J. Mol Biol., 186, 773-790.
-
(1985)
J. Mol Biol.
, vol.186
, pp. 773-790
-
-
Drew, H.R.1
Travers, A.A.2
-
6
-
-
0016077428
-
Theoretical models for heterogeneity of base composition in DNA
-
Elton, R.A. (1974) Theoretical models for heterogeneity of base composition in DNA. J. Theor. Biol., 45, 533-553.
-
(1974)
J. Theor. Biol.
, vol.45
, pp. 533-553
-
-
Elton, R.A.1
-
7
-
-
0027059264
-
Assessment of protein coding measures
-
Fickett, J.W. and Tung, C.S. (1992) Assessment of protein coding measures. Nucleic Acids Res., 20, 6441-6450.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 6441-6450
-
-
Fickett, J.W.1
Tung, C.S.2
-
8
-
-
0017873321
-
Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins
-
Garnier, J., Osguthorpe, D.J. and Robson, B. (1978) Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J. Mol. Biol., 120, 95-120.
-
(1978)
J. Mol. Biol.
, vol.120
, pp. 95-120
-
-
Garnier, J.1
Osguthorpe, D.J.2
Robson, B.3
-
9
-
-
0001818891
-
Measuring correlations in symbol sequences
-
Herzel, H. and Große, I. (1995) Measuring correlations in symbol sequences. Physica A, 216, 518-542.
-
(1995)
Physica A
, vol.216
, pp. 518-542
-
-
Herzel, H.1
Große, I.2
-
10
-
-
0032001782
-
Interpreting correlations in biosequences
-
Herzel, H., Trifonov, E.N., Weiss, O. and Große, I. (1998a) Interpreting correlations in biosequences. Physica A, 249, 449-459.
-
(1998)
Physica A
, vol.249
, pp. 449-459
-
-
Herzel, H.1
Trifonov, E.N.2
Weiss, O.3
Große, I.4
-
11
-
-
0031757877
-
Sequence periodicity in complete genomes of Archaea suggests positive supercoiling
-
Herzel, H., Weiss,O. and Trifonov, E.N. (1998b) Sequence periodicity in complete genomes of Archaea suggests positive supercoiling. J. Biomol Struct. Dyn., 16, 341-345.
-
(1998)
J. Biomol Struct. Dyn.
, vol.16
, pp. 341-345
-
-
Herzel, H.1
Weiss, O.2
Trifonov, E.N.3
-
12
-
-
0029115481
-
A sequence property approach to searching protein databases
-
Hobohm, U. and Sander, C. (1995) A sequence property approach to searching protein databases. J. Mol Biol., 251, 390-399.
-
(1995)
J. Mol Biol.
, vol.251
, pp. 390-399
-
-
Hobohm, U.1
Sander, C.2
-
13
-
-
0030595138
-
Nucleosome DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences
-
Ioshikhes, I., Bolshoy, A., Derenshteyn, K., Borodovsky, M. and Trifonov, E.N. (1996) Nucleosome DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences. J. Mol. Biol., 262, 129-139.
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 129-139
-
-
Ioshikhes, I.1
Bolshoy, A.2
Derenshteyn, K.3
Borodovsky, M.4
Trifonov, E.N.5
-
14
-
-
0019065166
-
Hydrophobicity and protein structure
-
Kanehisa, M.I. and Tsong, T.Y. (1980) Hydrophobicity and protein structure. Biopolymers, 19, 1617-1628.
-
(1980)
Biopolymers
, vol.19
, pp. 1617-1628
-
-
Kanehisa, M.I.1
Tsong, T.Y.2
-
15
-
-
0021154312
-
Reverse gyrase - A topoisomerase which introduces positive superhelical turns into DNA
-
Kikuchi, A. and Asai, K. (1984) Reverse gyrase - a topoisomerase which introduces positive superhelical turns into DNA. Nature, 309, 677-681.
-
(1984)
Nature
, vol.309
, pp. 677-681
-
-
Kikuchi, A.1
Asai, K.2
-
16
-
-
0030956537
-
DNA topology in hyperthermophilic Archaea: Reference states and their variation with growth phase, growth temperature, and temperature stresses
-
Lopez-Garcia, P. and Forterre, P. (1997) DNA topology in hyperthermophilic Archaea: Reference states and their variation with growth phase, growth temperature, and temperature stresses. Mol. Microbiol., 23, 1267-1279.
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 1267-1279
-
-
Lopez-Garcia, P.1
Forterre, P.2
-
17
-
-
0021100990
-
Nucleotide sequence-directed mapping of the nucleosomes
-
Mengeritsky, G. and Trifonov, E.N. (1983) Nucleotide sequence-directed mapping of the nucleosomes. Nucleic Acids Res., 11, 3833-3851.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 3833-3851
-
-
Mengeritsky, G.1
Trifonov, E.N.2
-
18
-
-
0025885691
-
DNA binding by the archaeal histone HMf results in positive supercoiling
-
Musgrave, D.R., Sandman, K.M. and Reeve, J.N. (1991) DNA binding by the archaeal histone HMf results in positive supercoiling. Proc. Natl Acad. Sci. USA, 88, 10397-10401.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 10397-10401
-
-
Musgrave, D.R.1
Sandman, K.M.2
Reeve, J.N.3
-
19
-
-
0022449038
-
Positively supercoiled DNA in a virus-like particle of an archaebacterium
-
Nadal, M., Mirambeau, G., Forterre, P., Reiter, W.-D. and Duguet, M. (1986) Positively supercoiled DNA in a virus-like particle of an archaebacterium. Nature, 321, 256-258.
-
(1986)
Nature
, vol.321
, pp. 256-258
-
-
Nadal, M.1
Mirambeau, G.2
Forterre, P.3
Reiter, W.-D.4
Duguet, M.5
-
20
-
-
0019321987
-
Self-assembly of single and closely spaced nucleosome core particles
-
Noll, M., Zimmer, S., Engel, S., and Dubochet, J. (1980) Self-assembly of single and closely spaced nucleosome core particles. Nucleic Acids Res., 8, 21-42.
-
(1980)
Nucleic Acids Res.
, vol.8
, pp. 21-42
-
-
Noll, M.1
Zimmer, S.2
Engel, S.3
Dubochet, J.4
-
21
-
-
0028912102
-
Novel protein families in archaean genomes
-
Ouzonis, C., Kyrpides, N. and Sander, C. (1995) Novel protein families in archaean genomes. Nucleic Acids Res., 23, 565-570.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 565-570
-
-
Ouzonis, C.1
Kyrpides, N.2
Sander, C.3
-
22
-
-
0030731459
-
Archaeal nucleosomes
-
Pereira, S.L., Grayling, R.A., Lurz, R. and Reeve, J.N. (1997) Archaeal nucleosomes. Proc. Natl Acad. Sci. USA. 94, 12633-12637.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 12633-12637
-
-
Pereira, S.L.1
Grayling, R.A.2
Lurz, R.3
Reeve, J.N.4
-
24
-
-
0003339634
-
Hidden segmentation of protein sequences: Structural connection with DNA
-
Pullman,A., Jortner,J. and Pullman,B. (eds). Kluwer Academic, Dordrecht
-
Trifonov, E.N. (1995) Hidden segmentation of protein sequences: structural connection with DNA. In Pullman,A., Jortner,J. and Pullman,B. (eds). Modelling of Biomolecular Structures and Mechanisms, pp. 473-479. Kluwer Academic, Dordrecht.
-
(1995)
Modelling of Biomolecular Structures and Mechanisms
, pp. 473-479
-
-
Trifonov, E.N.1
-
25
-
-
0032001783
-
3-, 10.5-, 200- and 400-base periodicities in genome sequences
-
Trifonov, E.N. (1998) 3-, 10.5-, 200- and 400-base periodicities in genome sequences. Physica A, 249, 511-516.
-
(1998)
Physica A
, vol.249
, pp. 511-516
-
-
Trifonov, E.N.1
-
26
-
-
0001415964
-
The pitch of chromatin DNA is reflected in its nucleotide sequence
-
Trifonov, E.N. and Sussman, J.L. (1980) The pitch of chromatin DNA is reflected in its nucleotide sequence. Proc. Natl Acad. Sci. USA, 77, 3816-3820.
-
(1980)
Proc. Natl Acad. Sci. USA
, vol.77
, pp. 3816-3820
-
-
Trifonov, E.N.1
Sussman, J.L.2
-
27
-
-
0001879994
-
A different view point on the chromatin higher order structure: Steric exclusion effects
-
In Sarma,R.H. and Sarma,M.H. (eds). Adenine Press, Guilderland
-
Ulanovsky, L.E. and Trifonov, E.N. (1986) A different view point on the chromatin higher order structure: steric exclusion effects. In Sarma,R.H. and Sarma,M.H. (eds). Biomolecular Stereodynamics III. pp. 35-44. Adenine Press, Guilderland.
-
(1986)
Biomolecular Stereodynamics III
, pp. 35-44
-
-
Ulanovsky, L.E.1
Trifonov, E.N.2
-
30
-
-
0030014783
-
DNA topoisomerases
-
Wang, J.C. (1996) DNA topoisomerases. Annu. Rev. Biochem., 65, 635-692.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 635-692
-
-
Wang, J.C.1
-
31
-
-
0032554318
-
Correlations in protein sequences and property codes
-
Weiss, O. and Herzel, H. (1998) Correlations in protein sequences and property codes. J. Theor. Biol., 190, 341-353.
-
(1998)
J. Theor. Biol.
, vol.190
, pp. 341-353
-
-
Weiss, O.1
Herzel, H.2
-
32
-
-
0030596486
-
Short-range order in two eukaryotic genomes: Relation to chromosome structure
-
Widom, J. (1996) Short-range order in two eukaryotic genomes: relation to chromosome structure. J. Mol. Biol., 259, 579-588.
-
(1996)
J. Mol. Biol.
, vol.259
, pp. 579-588
-
-
Widom, J.1
-
33
-
-
0013899202
-
The molecular basis of the genetic code
-
Woese, D.R., Dugre, D.H., Saxinger, W.C. and Dugre, S.A. (1966) The molecular basis of the genetic code. Proc. Natl Acad. Sci. USA, 55, 966-974.
-
(1966)
Proc. Natl Acad. Sci. USA
, vol.55
, pp. 966-974
-
-
Woese, D.R.1
Dugre, D.H.2
Saxinger, W.C.3
Dugre, S.A.4
-
34
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
-
Woese, C.R., Kandler, O. and Wheelis, M.L. (1990) Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl Acad. Sci. USA, 87, 4576-4579.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
35
-
-
0019887286
-
Periodicity in DNA primary structure is defined by secondary structure of the coded protein
-
Zhurkin, V.B. (1981) Periodicity in DNA primary structure is defined by secondary structure of the coded protein. Nucleic Acids Res., 9, 1963-1971.
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 1963-1971
-
-
Zhurkin, V.B.1
-
36
-
-
0021964342
-
Sequence-dependent bending of DNA and phasing of nucleosomes
-
Zhurkin, V.B. (1985) Sequence-dependent bending of DNA and phasing of nucleosomes. J. Biomol. Struct. Dyn., 4, 785-804.
-
(1985)
J. Biomol. Struct. Dyn.
, vol.4
, pp. 785-804
-
-
Zhurkin, V.B.1
|