Induction and maintenance of autonomous flock house virus RNA1 replication

Journal of Virology

Volumn 73, Issue 10, 1999, Pages 7933-7942

  Johnson, Kyle L ^a   Ball, L Andrew ^a  

^a UNIVERSITY OF ALABAMA AT BIRMINGHAM   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; PROTEIN PRECURSOR; RNA DIRECTED RNA POLYMERASE; RNA POLYMERASE II; VIRUS RNA;

ANIMAL CELL; ARTICLE; DNA TEMPLATE; DNA TRANSCRIPTION; ENZYME ACTIVE SITE; GENE EXPRESSION; GENE TRANSFER; GENETIC TRANSFECTION; HORMONAL REGULATION; KINETICS; NONHUMAN; PRIORITY JOURNAL; VIRUS GENOME; VIRUS REPLICATION;

EID: 0032883077     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.73.10.7933-7942.1999     Document Type: Article

References (63)

1. Ball, L. A. 1992. Cellular expression of a functional nodavirus RNA replicon from vaccinia virus vectors. J. Virol. 66:2335-2345.
2. Ball, L. A. 1994. Replication of the genomic RNA of a positive-strand RNA animal virus from negative-sense transcripts. Proc. Natl. Acad. Sci. USA 91:12443-12447.
3. Ball, L. A. 1995. Requirements for the self-directed replication of flock house virus RNA 1. J. Virol. 69:720-727.
4. Ball, L. A., J. M. Amann, and B. K. Garrett. 1992. Replication of nodamura virus after transfection of viral RNA into mammalian cells in culture. J. Virol. 66:2326-2334.
5. Ball, L. A., and Y. Li. 1993. cis-Acting requirements for the replication of flock house virus RNA2. J. Virol. 67:3544-3551.
6. Ball, L. A., B. Wohlrab, and Y. Li. 1994. Nodavirus RNA replication: mechanism and harnessing to vaccinia virus recombinants. Arch. Virol. 9(Suppl.): 407-416.
7. Biebricher, C. K., and M. Eigen. 1988. Kinetics of RNA replication by Qβ replicase, p. 1-21. In E. Domingo, J. J. Holland, and P. Ahlquist (ed.), RNA genetics, vol. I. RNA-directed virus replication. CRC Press, Inc., Boca Raton, Fla.
8. Biebricher, C. K., M. Eigen, and W. C. Gardiner, Jr. 1983. Kinetics of RNA replication. Biochemistry 22:2544-2559.
9. Biebricher, C. K., M. Eigen, and W. C. Gardiner, Jr. 1985. Kinetics of RNA replication: competition and selection among self-replicating RNA species. Biochemistry 24:6550-6560.
10. Biebricher, C. K., M. Eigen, and W. C. Gardiner, Jr. 1984. Kinetics of RNA replication: plus-minus asymmetry and double-strand formation. Biochemistry 23:3186-3194.
11. Biebricher, C. K., M. Eigen, and R. Luce. 1981. Kinetic analysis of template-instructed and de novo RNA synthesis by Qβ replicase. J. Mol. Biol. 148: 391-410.
12. Bienz, K., D. Egger, and T. Pfister. 1994. Characteristics of the poliovirus replication complex. Arch. Virol. 9(Suppl.):147-157.
13. Bienz, K., D. Egger, T. Pfister, and M. Troxler. 1992. Structural and functional characterization of the poliovirus replication complex. J. Virol. 66: 2740-2747.
14. Chang, D. D., and P. A. Sharp. 1989. Regulation by HIV Rev depends upon recognition of splice sites. Cell 59:789-795.
15. Chapon, C., and P. Legrain. 1992. A novel gene, spp91-1, suppresses the splicing defect and the pre-mRNA nuclear export in the prp9-1 mutant. EMBO J. 11:3279-3288.
16. Chomczynski, P., and N. Sacchi. 1987. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162:156-159.
17. Dasgupta, R. 17 January 1994, submission date. Sequence of flock house virus genomic RNA for protein A, protein B1, and protein B2, accession no. X77156. [Online.] http://www.ncbi.nlm.nih.gov [23 July 1999, last date accessed.]
18. Dasmahapatra, B., R. Dasgupta, A. Ghosh, and P. Kaesberg. 1985. Structure of the black beetle virus genome and its functional implications. J. Mol. Biol. 182:183-189.
19. Dasmahapatra, B., R. Dasgupta, K. Saunders, B. Selling, T. Gallagher, and P. Kaesberg. 1986. Infectious RNA derived from transcription from cloned cDNA copies of the genomic RNA of an insect virus. Proc. Natl. Acad. Sci. USA 83:63-66.
20. Davison, A. J., and B. Moss. 1989. Structure of vaccinia virus early promoters. J. Mol. Biol. 210:749-769.
21. Deckwerth, T. L., and E. M. Johnson, Jr. 1993. Temporal analysis of events associated with programmed cell death (apoptosis) of sympathetic neurons deprived of nerve growth factor. J. Cell Biol. 123:1207-1222.
22. Der, S. D., V.-L. Yang, C. Weissmann, and B. R. G. Williams. 1997. A double-stranded RNA-activated protein kinase-dependent pathway mediating stress-induced apoptosis. Proc. Natl. Acad. Sci. USA 94:3279-3283.
23. Eigen, M., C. K. Biebricher, M. Gebinoga, and W. C. Gardiner. 1991. The hypercycle. Coupling of RNA and protein biosynthesis in the infection cycle of an RNA bacteriophage. Biochemistry 30:11005-11018.
24. Fire, A., S.-Q. Xu, M. K. Montgomery, S. A. Kostas, S. E. Driver, and C. C. Mello. 1998. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391:806-811.
25. Friesen, P. D., and R. R. Rueckert. 1982. Black beetle virus: messenger RNA for protein B is a subgenomic viral RNA. J. Virol. 42:986-995.
26. Friesen, P. D., and R. R. Rueckert. 1984. Early and late functions in a bipartite RNA virus: evidence for translational control by competition between viral mRNAs. J. Virol. 49:116-124.
27. Fuerst, T. R., E. G. Niles, F. W. Studier, and B. Moss. 1986. Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. USA 83:8122-8126.
28. Gale, M., Jr., and M. G. Katze. 1998. Molecular mechanisms of interferon resistance mediated by viral-directed inhibition of PKR, the interferon-induced protein kinase. Pharmacol. Ther. 78:29-46.
29. Gallagher, T. M., P. D. Friesen, and R. R. Rueckert. 1983. Autonomous replication and expression of RNA1 from black beetle virus. J. Virol. 46: 481-489.
30. Gallagher, T. M., and R. R. Rueckert. 1988. Assembly-dependent maturation cleavage in provirions of a small icosahedral insect ribovirus. J. Virol. 62: 3399-3406.
31. Gonalons, E., M. Barrachina, J. A. Garcia-Sanz, and A. Celada. 1998. Translational control of MHC class II I-A molecules by IFN-γ. J. Immunol. 161:1837-1843.
32. Guarino, L. A., A. Ghosh, B. Dasmahapatra, R. Dasgupta, and P. Kaesberg. 1984. Sequence of the black beetle virus subgenomic RNA and its location in the viral genome. Virology 139:199-203.
33. Guarino, L. A., and P. Kaesberg. 1981. Isolation and characterization of an RNA-dependent RNA polymerase from black beetle virus-infected Drosophila melanogaster cells. J. Virol. 40:379-386.
34. Johnson, K. L., and L. A. Ball. 1997. Replication of flock house virus RNAs from primary transcripts made in cells by RNA polymerase II. J. Virol. 71:3323-3327.
35. Krishna, N. K., and A. Schneemann. 1999. Formation of an RNA heterodimer upon heating of nodavirus particles. J. Virol. 73:1699-1703.
36. Legrain, P., and M. Rosbach. 1989. Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm. Cell 57:573-583.
37. Levy-Strumpf, N., L. P. Deiss, H. Berissi, and A. Kimchi. 1997. DAP-5, a novel homolog of eukaryotic translation initiation factor 4G isolated as a putative modulator of gamma interferon-induced programmed cell death. Mol. Cell. Biol. 17:1615-1625.
38. Li, Y., and L. A. Ball. 1993. Nonhomologous RNA recombination during negative-strand synthesis of flock house virus RNA. J. Virol. 67:3854-3860.
39. Longworth, J. F., and G. P. Carey. 1976. A small RNA virus with a divided genome from Heteronychus arator (F.) [Coleoptera: Scarabaeidae]. J. Gen. Virol. 33:31-40.
40. Newman, J. F. E., and F. Brown. 1973. Evidence for a divided genome in Nodamura virus, an arthropod-borne picornavirus. J. Gen. Virol. 21:371-384.
41. Newman, J. F. E., and F. Brown. 1977. Further physicochemical characterization of Nodamura virus. Evidence that the divided genome occurs in a single component. J. Gen. Virol. 38:83-95.
42. No, D., T.-P. Yao, and R. M. Evans. 1996. Ecdysone-inducible gene expression in mammalian cells and transgenic mice. Proc. Natl. Acad. Sci. USA 93:3346-3351.
43. Nugent, C. I., K. L. Johnson, P. Sarnow, and K. Kirkegaard. 1999. Functional coupling between replication and packaging of poliovirus RNA. J. Virol. 73:427-435.
44. Orgel, L. E. 1963. The maintenance of the accuracy of protein synthesis and its relevance to ageing. Proc. Natl. Acad. Sci. USA 49:517-521.
45. Pal-Bahdra, M., U. Bahdra, and J. A. Birchler. 1997. Cosuppression in Drosophila: gene silencing of alcohol dehydrogenase by while-Adh transgenes is Polycomb dependent. Cell 90:479-490.
46. Perrotta, A. T., and M. D. Been. 1991. A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA. Nature 350:434-436.
47. Pfister, T., L. Pasamontes, M. Troxler, D. Egger, and K. Bienz. 1992. Immunocytochemical localization of capsid-related particles in subcellular fractions of poliovirus-infected cells. Virology 188:676-684.
48. Price, B. D., R. R. Rueckert, and P. Ahlquist. 1996. Complete replication of an animal virus and maintenance of expression vectors derived from it in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 93:9465-9470.
49. Rosenberg, A. H., B. N. Lade, D. Chui, S.-W. Lin, J. J. Dunn, and F. W. Studier. 1987. Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene 56:125-135.
50. Ruiz, F., L. Vayssie, C. Klotz, L. Sperling, and L. Madeddu. 1998. Homology-dependent gene silencing in Paramecium. Mol. Biol. Cell 9:931-943.
51. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
52. Saunders, K., and P. Kaesberg. 1985. Template-directed RNA polymerase from black beetle virus-infected Drosophila melanogaster cells. Virology 147: 373-381.
53. Scotti, P. D., S. Dearing, and D. W. Mossop. 1983. Flock house virus: a nodavirus isolated from Costelytra zealandica (White) (Coleoptera: Scarabaeidae). Arch. Virol. 75:181-189.
54. Selling, B. H., R. F. Allison, and P. Kaesberg. 1990. Genomic RNA of an insect virus directs synthesis of infectious virions in plants. Proc. Natl. Acad. Sci. USA 87:434-438.
55. Selling, B. H., and R. R. Rueckert. 1984. Plaque assay for black beetle virus. J. Virol. 51:251-253.
56. Sumper, M., and R. Luce. 1975. Evidence for de novo production of self-replicating and environmentally adapted RNA structures by bacteriophage Qβ replicase. Proc. Natl. Acad. Si. USA 72:162-166.
57. Torczynski, R. M., A. P. Bollon, and M. Fuke. 1983. The complete nucleotide sequence of the rat 18S ribosomal RNA gene and comparison with the respective yeast and frog genes. Nucleic Acids Res. 11:4879-4890.
58. Troxler, M., D. Egger, T. Pfister, and K. Bienz. 1992. Intracellular localization of poliovirus RNA by in situ hybridization at the ultrastructural level using single-stranded riboprobes. Virology 191:687-697.
59. Voinnet, O., P. Vain, S. Angell, and D. C. Baulcombe. 1998. Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA. Cell 95:177-187.
60. Wu, S.-H., and P. Kaesberg. 1991. Synthesis of template-sense, single-stranded flockhouse virus RNA in a cell-free replication system. Virology 183:392-396.
61. Wu, S.-X., P. Ahlquist, and P. Kaesberg. 1992. Active complete in vitro replication of nodavirus RNA requires glycerophospholipid. Proc. Natl. Acad. Sci. USA 89:11136-11140.
62. Zakeri, Z., D. Quaglino, T. Latham, K. Woo, and R. A. Lockshin. 1996. Programmed cell death in the tobacco hornworm, Manduca sexta: alteration in protein synthesis. Microscopy Res. Tech. 34:192-201.
63. Zhong, W., and R. R. Rueckert. 1993. Flock house virus: down-regulation of subgenomic RNA3 synthesis does not involve coat protein and is targeted to synthesis of its positive strand. J. Virol. 67:2716-2722.