Cloning and characterization of human and mouse PROSC (proline synthetase co-transcribed) genes

Journal of Human Genetics

Volumn 44, Issue 5, 1999, Pages 337-342

  Ikegawa, Shiro ^a   Isomura, Minoru ^a   Koshizuka, Yu ^a,b   Nakamura, Yusuke ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

Author keywords

Cloning; In silico gene trapping; Large scale DNA sequencing; Mapping; PROSC gene

Indexed keywords

SYNTHETASE;

ARTICLE; CHROMOSOME 8P; DNA SEQUENCE; EXON; GENE ISOLATION; GENE MAPPING; GENETIC TRANSCRIPTION; HUMAN; MOLECULAR CLONING; OPEN READING FRAME; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

AMINO ACID SEQUENCE; ANIMALS; ARABIDOPSIS; BASE SEQUENCE; CAENORHABDITIS ELEGANS; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN, PAIR 8; CLONING, MOLECULAR; DNA, COMPLEMENTARY; ESCHERICHIA COLI; HUMANS; MICE; MOLECULAR SEQUENCE DATA; PROTEINS; PSEUDOMONAS AERUGINOSA; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); MAMMALIA; RODENTIA;

EID: 0032860664     PISSN: 14345161     EISSN: None     Source Type: Journal    
DOI: 10.1007/s100380050172     Document Type: Article

References (16)

1. Claverie JM (1997) Computational methods for the identification of genes in vertebrate genomic sequences. Hum Mol Genet 6:1735-1744
2. Daigo Y, Isomura M, Nishiwaki T, Tamari M, Ishikawa S, Kai M, Murata Y, Takeuchi K, Yamane Y, Hayashi R, Minami M, Fujino MA, Hojo Y, Uchiyama I, Takagi T, Nakamura Y (1999) Characterization of a 1,200-kb genomic segment of chromosome 3p22-p21.3. DNA Res (6:37-44)
3. De Wergifosse P, Jacques B, Jonniaux JL, Purnelle B, Skala J, Goffeau A (1994) The sequence of a 22.4kb DNA fragment from the left arm of yeast chromosome II reveals homologues to bacterial proline synthetase and mouse alpha-adaptin, as well as a new permease and a DNA-binding protein. Yeast 10:1489-1496
4. Elkahloun AG, Krizman DB, Wang Z, Hofmann TA, Roe B, Meltzer PS (1997) Transcript mapping in a 46-kb sequenced region at the core of 12q13.3 amplification in human cancers. Genomics 42:295-301
5. Ewing B, Hillier L, Wendl MC, Green P (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8: 175-185
6. Ikegawa S, Isomura M, Koshizuka Y, Nakamura Y (1999a) Cloning and characterization of ASH2L and Ash2I, human and mouse homologs of the Drosophila ash2 gene. Cytogenet Cell Genet 84:167-172
7. Ikegawa S, Isomura M, Koshizuka Y, Nakamura Y (1999b) Cloning and characterization of a novel gene (c8orf2), a human representative of a novel gene family with homology to C. elegans C42.C1.9. Cytogenet Cell Genet (in press)
8. Ishikawa S, Kai M, Murata Y, Tamari M, Daigo Y, Murano T, Ogawa M, Nakamura Y (1998) Genomic organization and mapping of the human activin receptor type IIB (hActR-IIB) gene. J Hum Genet 43:132-134
9. Kozak M (1986) Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283-292
10. McKusick VA (1997) Genomics: structural and functional studies of genomes. Genomics 45:244-249
11. Murata Y, Tamari M, Takahashi T, Horio Y, Hibi K, Yokoyama S, Inazawa J, Yamakawa K, Ogawa A, Takahashi T, Nakamura Y (1994) Characterization of an 800-kb region at 3p22-p21.3 that was homozygously deleted in a lung cancer cell line. Hum Mol Genet 3:1341-1344
12. Rowen L, Mahairas G, Hood L (1997) Sequencing the human genome. Science 278:605-607
13. Savioz A, Jeenes DJ, Kocher HP, Haas D (1990) Comparison of proC and other housekeeping genes of Pseudomonas aeruginosa with their counterparts in Escherichia coli. Gene 86:107-111
14. Solovyev VV, Salamov AA, Lawrence CB (1994) Predicting internal exons by oligonucleotide composition and discriminant analysis of spliceable open reading frames. Nucleic Acids Res 22:5156-5163
15. Uberbacher EC, Mural RJ (1991) Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach. Proc Natl Acad Sci USA 88:11261-11265
16. Wilson R, Ainscough R, Anderson K, Baynes C, Berks M, Bonfield J, Burton J, Connell M, Copsey T, Cooper J, Coulson A, Craxton M, Dear S, Du Z, Durbin R, Favello A, Fulton L, Gardner A, Green P, Hawkins T, Hillier L, Jier M, Johnston L, Jones M, Kershaw J, Kirsten J, Laister N, Latreille P, Lightning J, Lloyd C, McMurray A, Mortimore B, O'Callaghan M, Parsons J, Percy C, Rifken L, Roopra A, Saunders D, Shownkeen R, Smaldon N, Smith A, Sonnhammer E, Staden R, Sulston J, Thierry-Mieg J, Thomas K, Vaudin M, Vaughan K, Waterston R, Watson A, Weinstock L, Wilkinson-Sproat J, Wohldman P (1994) 2.2Mb of contiguous nucleotide sequence from chromosome III of C. elegans. Nature (Lond) 368:32-38