Characterization of the phthalate permease OphD from Burkholderia cepacia ATCC 17616

Journal of Bacteriology

Volumn 181, Issue 19, 1999, Pages 6197-6199

  Chang, Hung Kuang ^a   Zylstra, Gerben J ^a  

^a RUTGERS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PERMEASE; PHTHALIC ACID DERIVATIVE;

ARTICLE; BACTERIAL GENE; BURKHOLDERIA CEPACIA; CELL TRANSPORT; CONTROLLED STUDY; ENZYME ANALYSIS; ESCHERICHIA COLI; GENE ACTIVITY; GENE EXPRESSION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL;

BACTERIA (MICROORGANISMS); BURKHOLDERIA; BURKHOLDERIA CEPACIA; ESCHERICHIA COLI; NEGIBACTERIA; PROKARYOTA;

EID: 0032859007     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.181.19.6197-6199.1999     Document Type: Article

References (26)

1. Batie, C. J., E. LaHaie, and D. P. Ballou. 1987. Purification and characterization of phthalate oxygenase and phthalate oxygenase reductase from Pseudomonas cepacia. J. Biol. Chem. 262:1510-1518.
2. Blattner, F. R., G. Plunkett III, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
3. Chang, H. K., and G. J. Zylstra. 1998. Novel organization of the genes for phthalate degradation from Burkholderia cepacia DBO1. J. Bacteriol. 180: 6529-6537.
4. Chang, H. K., and G. J. Zylstra. 1999. Role of quinolinate phosphoribosyl transferase in degradation of phthalate by Burkholderia cepacia DBO1. J. Bacteriol. 181:3069-3075.
5. Collier, L. S., N. N. Nichols, and E. L. Neidle. 1997. benK encodes a hydrophobic permease-like protein involved in benzoate degradation by Acinetobacter sp. strain ADP1. J. Bacteriol. 179:5943-5946.
6. Correll, C. C., C. J. Batie, D. P. Ballou, and M. L. Ludwig. 1992. Phthalate dioxygenase reductase: a modular structure for electron transfer from pyridine nucleotides to [2Fe-2S]. Science 258:1604-1610.
7. Crouzet, P., and L. Otten. 1995. Sequence and mutational analysis of a tartrate utilization operon from Agrobacterium vitis. J. Bacteriol. 177:6518-6526.
8. Culham, D. E., B. Lasby, A. G. Marangoni, J. L. Milner, B. A. Steer, R. W. van Nues, and J. M. Wood. 1993. Isolation and sequencing of Escherichia coli gene proP reveals unusual structural features of the osmoregulatory proline/betaine transporter, ProP. J. Mol. Biol. 229:268-276.
9. Devereux, J., P. Haeberli, and O. Smithies. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
10. Gassner, G. T., D. P. Ballou, G. A. Landrum, and J. W. Whittaker. 1993. Magnetic circular dichroism studies on the mononuclear ferrous active site of phthalate dioxygenase from Pseudomonas cepacia show a change of ligation state on substrate binding. Biochemistry 32:4820-4825.
11. Hofmann, K., and W. Stoffel. 1993. TMbase - a database of membrane spanning proteins segments. Biol. Chem. Hoppe-Seyler 374:166.
12. Kowalchuk, G. A., G. B. Hartnett, A. Benson, J. E. Houghton, K. L. Ngai, and L. N. Ornston. 1994. Contrasting patterns of evolutionary divergence within the Acinetobacter calcoaceticus pea operon. Gene 146:23-30.
13. Leveau, J. H., A. J. Zehnder, and J. R. van der Meer. 1998. The tfdK gene product facilitates uptake of 2,4-dichlorophenoxyacetate by Ralstonia eutropha JMP134(pJP4). J. Bacteriol. 180:2237-2243.
14. Nichols, N. N., and C. S. Harwood. 1997. PcaK, a high-affinity permease for the aromatic compound 4-hydroxybenzoate and protocatechuate from Pseudomonas putida. J. Bacteriol. 179:5056-5061.
15. Nomura, Y., M. Nakagawa, N. Ogawa, S. Harashima, and Y. Oshima. 1992. Genes in PHT plasmid encoding the initial degradation pathway of phthalate in Pseudomonas putida. J. Ferment. Bioeng. 74:333-344.
16. Pao, S. S., I. T. Paulsen, and M. H. J. Saier. 1998. Major facilitator super-family. Microbiol. Mol. Biol. Rev. 62:1-34.
17. Prieto, M. A., E. Diaz, and J. L. Garcia. 1996. Molecular characterization of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli W: engineering a mobile aromatic degradative cluster. J. Bacteriol. 178:111-120.
18. Pujar, B. G., and D. W. Ribbons. 1985. Phthalate metabolism in Pseudomonas fluorescens PHK: purification and properties of 4,5-dihydroxyphthalate decarboxylase. Appl. Environ. Microbiol. 49:374-376.
19. Saint, C. P., and P. Romas. 1996. 4-Methylphthalate catabolism in Burkholderia (Pseudomonas) cepacia Pc701: a gene encoding a phthalate-specific permease forms part of a novel gene cluster. Microbiology 142:2407-2418.
20. Salomone, J. Y., P. Crouzet, P. De Ruffray, and L. Otten. 1996. Characterization and distribution of tartrate utilization genes in the grapevine pathogen Agrobacterium vitis. Mol. Plant-Microbe Interact. 9:401-408.
21. Seol, W., and A. J. Shatkin. 1991. Escherichia coli kgtP encodes an alpha-ketoglutarate transporter. Proc. Natl. Acad. Sci. USA 88:3802-3806.
22. Shimamoto, T., H. Izawa, H. Daimon, N. Ishiguro, M. Shinagawa, Y. Sakano, M. Tsuda, and T. Tsuchiya. 1991. Cloning and nucleotide sequence of the gene (citA) encoding a citrate carrier from Salmonella typhimurium. J. Biochem. (Tokyo) 110:22-28.
23. TMpred - Prediction of Transmembrane Regions and Orientation. [On-line.] European Molecular Biology network, http://www.ch.embnet.org/soft-ware/TMPRED_form.html. [17 May 1999, last date accessed.]
24. van der Rest, M. E., E. Schwarz, D. Oesterhelt, and W. N. Konings. 1990. DNA sequence of a citrate carrier of Klebsiella pneumoniae. Eur. J. Biochem. 189:401-407.
25. Williams, P. A., and L. E. Shaw. 1997. mucK, a gene in Acinetobacter calcoaceticus ADP1 (BD413), encodes the ability to grow on exogenous cis,cis-muconate as the sole carbon source. J. Bacteriol. 179:5935-5942.
26. Zylstra, G. J., R. H. Olsen, and D. P. Ballou. 1989 Cloning, expression, and regulation of the Pseudomonas cepacia protocatechuate 3,4-dioxygenase genes. J. Bacteriol. 171:5907-5914.