Characterization of physical gap sizes at human telomeres

Genome Research

Volumn 9, Issue 9, 1999, Pages 888-894

  Lese, Christa M ^a   Fantes, Judy A ^a   Riethman, Harold C ^b   Ledbetter, David H ^a  

^a UNIVERSITY OF CHICAGO   (United States)

^b WISTAR INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME 12P; CHROMOSOME 15Q; CHROMOSOME 16P; CHROMOSOME 9P; FLUORESCENCE IN SITU HYBRIDIZATION; GENE MAPPING; HUMAN; MEDICAL GENETICS; MOLECULAR CLONING; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; TELOMERE;

CHROMOSOME MAPPING; CHROMOSOMES, BACTERIAL; CHROMOSOMES, HUMAN, PAIR 12; CHROMOSOMES, HUMAN, PAIR 15; CHROMOSOMES, HUMAN, PAIR 16; CHROMOSOMES, HUMAN, PAIR 9; DATABASES, FACTUAL; GENE LIBRARY; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; TELOMERE;

EID: 0032849213     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.9.9.888     Document Type: Article

References (26)

1. Blouin, J.-L., D.H. Christie, A. Gos, A. Lynn, M.A. Morris, D.H. Ledbetter, A. Chakravarti, and S.E. Antonarakis 1995. A new dinucleotide repeat polymorphism at the telomere of chromosome 21q reveals a significant difference between male and female rates of recombination. Am. J. Hum. Genet. 57: 388-394.
2. Broman, K.W., J.C. Murray, V.C. Sheffield, R.L. White, and J.L. Weber. 1998. Comprehensive human genetic maps: Individual and sex-specific variation in recombination. Am. J. Hum. Genet. 63: 861-869.
3. Brown, W.R., P.J. MacKinnon, A. Villasante, N. Spurr, V.J. Buckle, and M.J. Dobson. 1990. Structure and polymorphism of human telomere-associated DNA. Cell 63: 119-132.
4. Chong, S.S., S.D. Pack, A.V. Roschke, A. Tanigami, R. Carrozzo, A.C.M. Smith, W.B. Dobyns, D.H. Ledbetter 1997. A revision of the lissencephaly and Miller-Dicker syndrome critical region in chromosome 17p13.3. Hum. Mol. Genet. 6: 147-155.
5. Collins, F.S., M.S. Guyer and A. Chakravarti. 1997. Variations on a theme: Cataloging human DNA sequence variation. Science 278: 1580-1581.
6. Cox, D.R., M. Burmeister, E.R. Price, S. Kim, and R.M. Myers. 1990. Radiation hybrid mapping: A somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes. Science 250: 245-250.
7. Cross, S.H., R.C. Allshire, S.J. McKay, N.I. McGill, and H.J. Cooke. 1989. Cloning of human telomeres by complementation in yeast. Nature 338: 771-774.
8. Dib, C., S. Faure, C. Fizames, D. Samson, N. Drouot, A. Vignal, P. Millasseau, S. Marc, J. Hazan, E. Seboun, et al. 1996. A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature 380: 152-154.
9. Donis-Keller, H., P. Green, C. Helms, S. Cartinhour, B. Weiffenbach, K. Stephens, T.P. Keith, D.W. Bowden, D.R. Smith, E.S. Lander et al. 1987. A genetic linkage map of the human genome. Cell 51: 319-337.
10. Flint, J., K. Thomas, G. Micklem, H. Raynham, K. Clark, N.A. Doggett, A. King, D.R. Higgs 1997a. The relationship between chromosome structure and function at a human telomeric region. Nat. Genet. 15: 252-257.
11. Flint, J., G.P. Bates, K. Clark, A. Dorman, D. Willingham, B.A. Roe, G. Micklem, D.R. Higgs, E.J. Louis 1997b. Sequence comparison of human and yeast telomeres identifies structurally distinct subtelomeric domains. Hum. Mol. Genet. 6: 1305-1313.
12. Hudson, T.J., L.D. Stein, S.S. Gerety, J. Ma, A.B. Castle, J. Silva, D.K. Slonim, R. Baptista, L. Kruglyak, S.-H. Xu et al. 1995. An STS-based map of the human genome. Science 270: 1945-1954.
13. Ijdo, J.W., A. Baldini, D.C. Ward, S.T. Reeders, and R.A. Wells. 1991. Origin of human chromosome 2: An ancestral telomere-telomere fusion. Proc. Natl. Acad. Sci. 88: 9051-9055.
14. Matsumoto, N., E. Soeda, H. Ohashi, M. Fujimoto, R. Kato, T. Tsujita, H. Tomita, S. Kondo, Y. Fukushima, N. Niikawa 1997. A 1.2-megabase BAC/PAC contig spanning the 14q13 breakpoint of t(2; 14) in a mirror-image polydactyly patient. Genomics 45: 11-16.
15. Moyzis, R.K., J.M. Buckingham, L.S. Cram, M. Dani, L.L. Deaven, M.D. Jones, J. Meyne, R.L. Ratliff, J.R. Wu 1988. A highly conserved repetitive DNA sequence, (TTAGGG)n, present at the telomeres of human chromosomes. Proc. Natl. Acad. Sci. 85: 6622-6626.
16. National Institutes of Health, Institute of Molecular Medicine Collaboration, Y. Ning, A. Roschke, A.C.M. Smith, M. Macha, K. Precht, H. Riethman, D. Ledbetter, J. Flint, S. Horsley et al. 1996. A complete set of human telomeric probes and their clinical application. Nat. Genet. 14: 86-89.
17. Negorev, D.G., R.A. Macina, C. Spais, L.A. Ruthig, X.L. Hu, and H.C Riethman. 1994. Physical analysis of the terminal 270 kb of DNA from human chromosome 1q. Genomics 22: 569-578.
18. Riethman, H. 1997. Closing in on telomeric closure. Genome Res. 7: 853-855.
19. Riethman, H.C., R.K. Moyzis, J. Meyne, D.T. Burke, and M.V. Olson. 1989. Cloning human telomeric DNA fragments into Saccharomyces cerevesiae using a yeast artificial chromosome vector. Proc. Natl. Acad. Sci. 86: 6240-6244.
20. Rosenberg, M., L. Hui, J. Ma, H.C. Nusbaum, K. Clark, L. Robinson, L. Dziadzio, P.M. Swain, T. Keith, T.J. Hudson et al. 1997. Characterization of short tandem repeats form thirty-one human telomeres. Genome Res. 7: 917-923.
21. Rouyer, F., A. de la Chapelle, M. Andersson, and J. Weissenbach. 1990. An interspersed repeated sequence specific for human subtelomeric regions. EMBO J. 9: 505-514.
22. Saccone, S., A. De Sario, G. Della Valle, and G. Bernardi. 1992. The highest gene concentrations in the human genome are in telomeric bands of metaphase chromosomes. Proc. Natl. Acad. Sci. 89: 4913-4917.
23. Stewart, E.A., K.B. McKusick, A. Aggarwal, E. Bajorek, S. Brady, A. Chu, N. Fang, D. Hadley, M. Harris, S. Hussain 1997. An STS-based radiation hybrid map of the human genome. Genome Res. 7: 422-433.
24. Trask, B.J., S. Allen, H. Massa, A. Fertitta, R. Sachs, G. van den Engh, and M. Wu. 1993. Studies of metaphase and interphase chromosomes using fluorescence in situ hybridization. Cold Spring Harb. Symp. Quant. Biol. 58: 767-775.
25. Vocero-Akbani, A., C. Helms, J.C. Wang, F.J. Sanjurjo, J. Korte-Sarfaty, R.A. Veile, L. Liu, A. Jauch, A.K. Burgess, A.V. Hing et al. 1996. Mapping human telomere regions with YAC and P1 clones: Chromosome- specific markers for 27 telomeres including 149 STSs and 24 polymorphisms for 14 proterminal regions. Genomics 36: 492-506.
26. Wang, D.G., J.B. Fan, C.J. Siao, A. Berno, P. Young, R. Sapolsky, G. Ghandour, N. Perkins, E. Winchester, J. Spencer et al. 1998. Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome. Science 280: 1077-1082.