Regulation of closterovirus gene expression examined by insertion of a self-processing reporter and by northern hybridization

Journal of Virology

Volumn 73, Issue 10, 1999, Pages 7988-7993

  Hagiwara, Yuka ^a   Peremyslov, Valery V ^a   Dolja, Valerian V ^a  

^a OREGON STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLUCURONIDASE; CAPSID PROTEIN; HEAT SHOCK PROTEIN 70; PROTEINASE;

ARTICLE; CLOSTEROVIRUS; ENZYME ASSAY; GENE AMPLIFICATION; GENE DELETION; GENE EXPRESSION REGULATION; GENE INSERTION; KINETICS; MOSAIC VIRUS; NONHUMAN; NORTHERN BLOTTING; OPEN READING FRAME; PRIORITY JOURNAL; PROMOTER REGION; REPORTER GENE; TRANSCRIPTION REGULATION;

EID: 0032844220     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.73.10.7988-7993.1999     Document Type: Article

References (37)

1. Agranovsky, A. A., V. P. Boyko, A. V. Karasev, N. A. Lunina, E. V. Koonin, and V. V. Dolja. 1991. Nucleotide sequence of the 3′-terminal half of beet yellows closterovirus RNA genome: unique arrangement of eight virus genes. J. Gen. Virol. 72:15-23.
2. Agranovsky, A. A., A. S. Folimonov, S. Y. Folimonova, S. Y. Morozov, J. Schieman, D. Lesemann, and J. G. Atabekov. 1998. Beet yellows closterovirus HSP70-like protein mediates the cell-to-cell movement of a potexvirus transport-deficient mutant and a hordeivirus-based chimeric virus. J. Gen. Virol. 79:889-895.
3. Agranovsky, A. A., D. E. Lesemann, E. Maiss, R. Hull, and J. G. Atabekov. 1995. "Rattlesnake" structure of a filamentous plant RNA virus built of two capsid proteins. Proc. Natl. Acad. Sci. USA 92:2470-2473.
4. Allison, R., R. E. Johnston, and W. G. Dougherty. 1986. The nucleotide sequence of the coding region of tobacco etch virus genomic RNA: evidence for a synthesis of a single polyprotein. Virology 154:9-20.
5. An, S., A. Maeda, and S. Makino. 1998. Coronavirus transcription early in infection. J. Virol. 72:8517-8524.
6. Bar-Joseph, M., G. Yang, R. Gafni, and M. Mavassi. 1997. Subgenomic RNAs: the possible building blocks for modular recombination of Closteroviridae genomes. Semin. Virol. 8:113-119.
7. Carrington, J. C., S. M. Cary, T. D. Parks, and W. G. Dougherty. 1989. A second proteinase encoded by a plant potyvirus genome. EMBO J. 8:365-370.
8. Carrington, J. C., and D. D. Freed. 1990. Cap-independent enhancement of translation by a plant potyvirus 5′ nontranslated region. J. Virol. 64:1590-1597.
9. Dawson, W. O., and K. M. Lehto. 1990. Regulation of tobamovirus gene expression. Adv. Virus Res. 38:307-342.
10. Dolja, V. V., A. V. Karasev, and A. A. Agranovsky. 1990. Organization of beet yellows closterovirus genome, p. 31-35. In F. X. Heinz and M. A. Brinton (ed.), New aspects of positive-strand RNA viruses. American Society for Microbiology, Washington, D.C.
11. Dolja, V. V., H. J. McBride, and J. C. Carrington. 1992. Tagging of plant potyvirus replication and movement by insertion of β-glucuronidase (GUS) into the viral polyprotein. Proc. Natl. Acad. Sci. USA 89:10208-10212.
12. Dolja, V. V., K. L. Herndon, T. P. Pirone, and J. C. Carrington. 1993. Spontaneous mutagenesis of a plant potyvirus genome after insertion of a foreign gene. J. Virol. 67:5968-5975.
13. Dolja, V. V., A. V. Karasev, and E. V. Koonin. 1994. Molecular biology and evolution of closteroviruses: sophisticated build-up of large RNA genomes. Annu. Rev. Phytopathol. 32:261-285.
14. Dolja, V. V., J. Hong, K. E. Keller, R. R. Martin, and V. V. Peremyslov. 1997. Suppression of potyvirus infection by coexpressed closterovirus protein. Virology 234:243-252.
15. French, R., and P. Ahlquist. 1988. Characterization and engineering of sequences controlling in vivo synthesis of brome mosaic virus subgenomic RNA. J. Virol. 62:2411-2420.
16. He, X.-H., A. L. N. Rao, and R. Creamer. 1997. Characterization of beet yellows closterovirus-specific RNAs in infected plants and protoplasts. Phytopathology 87:347-351.
17. Hilf, M. E., A. V. Karasev, H. R. Pappu, D. J. Gumpf, C. L. Niblett, and S. M. Garnsey. 1995. Characterization of citrus tristeza virus subgenomic RNAs in infected tissue. Virology 208:576-582.
18. Karasev, A. V., M. E. Hilf, S. M. Garnsey, and W. O. Dawson. 1997. Transcriptional strategy of closteroviruses: mapping the 5′ termini of the citrus tristeza virus subgenomic RNAs. J. Virol. 71:6233-6236.
19. Karasev, A. V., A. S. Kashina, V. I. Gelfand, and V. V. Dolja. 1992. HSP70-related 65 kDa protein of beet yellows closterovirus is a microtubule-binding protein. FEBS Lett. 304:12-14.
20. Kim, K.-H., and C. Hemenway. 1997. Mutations that alter a conserved element upstream of the potato virus X triple block and coat protein genes affect subgenomic RNA accumulation. Virology 232:187-197.
21. Klaassen, V. A., M. Boeshore, E. V. Koonin, T. Tian, and B. W. Falk. 1995. Genome structure and phylogenetic analysis of lettuce infectious yellows virus, a whitefly transmitted, bipartite closterovirus. Virology 208:99-110.
22. Koev, G., B. R. Mohan, and W. A. Miller. 1999. Primary and secondary structural elements required for synthesis of barley yellow dwarf virus subgenomic RNA1. J. Virol. 73:2876-2885.
23. Koonin, E. V., and V. V. Dolja. 1993. Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit. Rev. Biochem. Mol. Biol. 28:375-430.
24. Kunkel, T. A., J. D. Roberts, and R. Zakour. 1987. Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol. 154:367-382.
25. Lai, M. M. C., and D. Cavanagh. 1997. The molecular biology of coronaviruses. Adv. Virus Res. 48:1-100.
26. Levis, R., S. Schlesinger, and H. V. Huang. 1990. Promoter for Sindbis virus RNA-dependent subgenomic RNA transcription. J. Virol. 64:1726-1733.
27. Marsh, L. E., T. W. Dreher, and T. C. Hall. 1988. Mutational analysis of the core and modulator sequences of the BMV RNA 3 subgenomic promoter. Nucleic Acids Res. 16:981-985.
28. Medina, V., V. V. Peremyslov, Y. Hagiwara, and V. V. Dolja. 1999. Subcellular localization of the HSP70-homolog encoded by beet yellows closterovirus. Virology 260:173-181.
29. Miller, W. A., T. W. Dreher, and T. C. Hall. 1985. Synthesis of brome mosaic virus subgenomic RNA in vitro by internal initiation on (-)·sense genomic RNA. Nature (London) 313:68-70.
30. Navas-Castillo, J., M. R. Albiacb-Marti, S. Gowda, M. Hilf, S. M. Garnsey, and W. O. Dawson. 1997. Kinetics of accumulation of citrus tristeza virus RNAs in host and non-host protoplasts. Virology 228:92-97.
31. Peremyslov, V. V., Y. Hagiwara, and V. V. Dolja. 1998. Genes required for replication of the 15.5-kilobase RNA genome of a plant closterovirus. J. Virol. 72:5870-5876.
32. Santa Cruz, S., S. Chapman, A. G. Roberts, I. M. Roberts, D. A. M. Prior, and K. J. Oparka. 1996. Assembly and movement of a plant virus carrying a green fluorescent protein overcoat. Proc. Natl. Acad. Sci. USA 93:6286-6290.
33. Siegel, R. W., S. Adkins, and C. C. Kao. 1997. Sequence-specific recognition of a subgenomic RNA promoter by a viral RNA polymerase. Proc. Natl. Acad. Sci. USA 94:11238-11243.
34. Sit, T. L., A. A. Vaewhongs, and S. A. Lommel. 1998. RNA-mediated transactivation of transcription from a viral RNA. Science 281:829-832.
35. van Marle, G., W. Luytjes, R. van der Most, T. van der Straaten, and W. J. Spaan. 1995. Regulation of coronavirus mRNA transcription. J. Virol. 69: 7851-7856.
36. Wang, J., and A. E. Simon. 1997. Analysis of the two subgenomic RNA promoters for turnip crinkle virus in vivo and in vitro. Virology 232:174-186.
37. Zhu, H.-Y., K.-S. Ling, D. E. Goszczynski, J. R. McFerson, and D. Gonsalves. 1998. Nucleotide sequence and genome organization of grapevine leafroll-associated virus-2 are similar to beet yellows virus, the closterovirus type member. J. Gen. Virol. 79:1289-1298.