메뉴 건너뛰기




Volumn 64, Issue 4, 1999, Pages 571-575

Primers for amplifying an alanine racemase gene fragment to detect E. coli strains in foods

Author keywords

Alanine racemase; Detection; E. coli; Oligonucleotide primer; PCR

Indexed keywords

ALANINE RACEMASE; BACTERIAL GENE; BACTERIUM DETECTION; BEEF; CHICKEN; EDETIC ACID; EGG; GENETIC STRAIN; MILK; OLIGONUCLEOTIDE; POLYMERASE CHAIN REACTION; PORK; POTATO; PRIMER DNA; SEROTYPE; SODIUM CHLORIDE; SOYBEAN; TOMATO;

EID: 0032842005     PISSN: 00221147     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2621.1999.tb15087.x     Document Type: Article
Times cited : (11)

References (30)
  • 2
    • 0025854378 scopus 로고
    • Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for uid
    • Bej, A.K., DiCesare, J.L., Haff, L., and Atlas, R.M. 1991a. Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for uid. Appl. Environ. Microbiol., 57: 1013-1017.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 1013-1017
    • Bej, A.K.1    DiCesare, J.L.2    Haff, L.3    Atlas, R.M.4
  • 3
    • 0025871313 scopus 로고
    • Detection of coliform bacteria and Escherichia coli by multiplex polymerase chain reaction: Comparison with defined substrate and plating methods for water quality monitoring
    • Bej, A. K., McCarty, S. C., and Atlas, R. M. 1991b. Detection of coliform bacteria and Escherichia coli by multiplex polymerase chain reaction: comparison with defined substrate and plating methods for water quality monitoring. Appl. Environ. Microbiol., 57: 2429-2432.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 2429-2432
    • Bej, A.K.1    McCarty, S.C.2    Atlas, R.M.3
  • 4
    • 0027519504 scopus 로고
    • Analysis of the Escherichia coli genome IV. DNA sequence of the region from 89.2 to 92.8 minutes
    • Blattner, F.R., Burland V., Plunkett III, G., Sofia, H.J., and Daniels, D.L. 1993. Analysis of the Escherichia coli genome IV. DNA sequence of the region from 89.2 to 92.8 minutes. Nucl. Acids Res., 21: 5408-5417.
    • (1993) Nucl. Acids Res. , vol.21 , pp. 5408-5417
    • Blattner, F.R.1    Burland, V.2    Plunkett G. III3    Sofia, H.J.4    Daniels, D.L.5
  • 5
    • 0031445305 scopus 로고    scopus 로고
    • A modified immuno-polymerase chain reaction for the detection of beta-glucuronidase from Escherichia coli
    • Chang, T. C. and Huang S. H. 1997. A modified immuno-polymerase chain reaction for the detection of beta-glucuronidase from Escherichia coli. J. Immunol. Methods, 208: 35-42.
    • (1997) J. Immunol. Methods , vol.208 , pp. 35-42
    • Chang, T.C.1    Huang, S.H.2
  • 6
    • 0025132819 scopus 로고
    • Specific detection of Escherichia coli and Shigella species using fragments of genes coding for β-glucuronidase
    • Cleuziat, P. and Robert-Baudouy, J. 1990. Specific detection of Escherichia coli and Shigella species using fragments of genes coding for β-glucuronidase. FEMS Microbiol. Lett., 72: 315-322.
    • (1990) FEMS Microbiol. Lett. , vol.72 , pp. 315-322
    • Cleuziat, P.1    Robert-Baudouy, J.2
  • 7
    • 0020649886 scopus 로고
    • Establishing homologies in protein sequences
    • Dayhoff, M. O., Barker, W. C., and Hunt, L. T. 1983. Establishing homologies in protein sequences. Methods Enzymol., 91: 524-545.
    • (1983) Methods Enzymol. , vol.91 , pp. 524-545
    • Dayhoff, M.O.1    Barker, W.C.2    Hunt, L.T.3
  • 8
    • 0020324377 scopus 로고
    • Fluorogenic assays for immediate confirmation of Escherichia coli
    • Feng, P.C.S. and Hartman, P.A. 1982. Fluorogenic assays for immediate confirmation of Escherichia coli. Appl. Environ. Microbiol., 43: 1320-1329.
    • (1982) Appl. Environ. Microbiol. , vol.43 , pp. 1320-1329
    • Feng, P.C.S.1    Hartman, P.A.2
  • 9
    • 0022336801 scopus 로고
    • Isolation of an alanine racemase gene from Bacillus sublilis and its use for plasmid maintenance in B. subtilis
    • Ferrari, E., Henner, D. J., and Yang, M. Y. 1985. Isolation of an alanine racemase gene from Bacillus sublilis and its use for plasmid maintenance in B. subtilis. Biotechnology, 3: 1003-1007.
    • (1985) Biotechnology , vol.3 , pp. 1003-1007
    • Ferrari, E.1    Henner, D.J.2    Yang, M.Y.3
  • 11
    • 0027453048 scopus 로고
    • Methods for Escherichia coli identification in food, water and clinical samples based on beta-glucuronidase detection
    • Frampton, E.W. and Restaino, L. 1993. Methods for Escherichia coli identification in food, water and clinical samples based on beta-glucuronidase detection. J. Appl. Bacteriol., 74: 223-233.
    • (1993) J. Appl. Bacteriol. , vol.74 , pp. 223-233
    • Frampton, E.W.1    Restaino, L.2
  • 12
    • 0022547634 scopus 로고
    • Biosynthetic alr alanine racemase from Salmonella typhimurium: DNA and protein sequence determination
    • Galakatos, N. G., Daub, E., Botstein, D., and Walsh, C. T. 1986. Biosynthetic alr alanine racemase from Salmonella typhimurium: DNA and protein sequence determination. Biochemistry, 25: 3255-3260.
    • (1986) Biochemistry , vol.25 , pp. 3255-3260
    • Galakatos, N.G.1    Daub, E.2    Botstein, D.3    Walsh, C.T.4
  • 13
    • 0026497412 scopus 로고
    • Rapid and Sensitive method for detection of Shiga-like Toxin-producing Escherichia coli in ground beef using the polymerase chain reaction
    • Gannon, V. P. J., King, R. K., Kim, J. Y., and Golsteyn Thomas, E. J. 1992. Rapid and Sensitive method for detection of Shiga-like Toxin-producing Escherichia coli in ground beef using the polymerase chain reaction. Appl. Environ. Microbiol., 58: 3809-3815.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 3809-3815
    • Gannon, V.P.J.1    King, R.K.2    Kim, J.Y.3    Golsteyn Thomas, E.J.4
  • 14
    • 0028272082 scopus 로고
    • Purification and characterization of eukaryotic alanine racemase acting as key enzyme in cyclosporin biosynthesis
    • Hoffmann, K., Schneider-Scherzer, E., Kleinkauf, H., and Zocher, R. 1994. Purification and characterization of eukaryotic alanine racemase acting as key enzyme in cyclosporin biosynthesis. J. Biol. Chem., 269: 12710-12714.
    • (1994) J. Biol. Chem. , vol.269 , pp. 12710-12714
    • Hoffmann, K.1    Schneider-Scherzer, E.2    Kleinkauf, H.3    Zocher, R.4
  • 15
    • 0030922436 scopus 로고    scopus 로고
    • The alanine racemase gene is essential for growth of Lactobacillus plantarum
    • Hols, P., Defrenne, C., Ferain, T., Derzelle, S., Delplace, B., and Delcour, J. 1997. The alanine racemase gene is essential for growth of Lactobacillus plantarum. J. Bacteriol., 179: 3804-3807.
    • (1997) J. Bacteriol. , vol.179 , pp. 3804-3807
    • Hols, P.1    Defrenne, C.2    Ferain, T.3    Derzelle, S.4    Delplace, B.5    Delcour, J.6
  • 16
    • 84964335051 scopus 로고
    • A colorimetric DNA hybridization method for the detection of Escherichia coli in foods
    • Hsu, H.-Y., Chan, S.W., Sobell, D.I., Halbert, D.N., and Groody, E.P. 1991. A colorimetric DNA hybridization method for the detection of Escherichia coli in foods. J. Food Prot., 54: 249-255.
    • (1991) J. Food Prot. , vol.54 , pp. 249-255
    • Hsu, H.-Y.1    Chan, S.W.2    Sobell, D.I.3    Halbert, D.N.4    Groody, E.P.5
  • 17
    • 0031007571 scopus 로고    scopus 로고
    • Efficiency of the polymerase chain reaction amplification of the uid gene for detection of Escherichia coli in contaminated water
    • Iqbal, S., Robinson, J., Deere, D., Saunders, J.R., Edwards, C., and Porter, J. 1997. Efficiency of the polymerase chain reaction amplification of the uid gene for detection of Escherichia coli in contaminated water. Lett. Appl. Microbiol., 24: 498-502.
    • (1997) Lett. Appl. Microbiol. , vol.24 , pp. 498-502
    • Iqbal, S.1    Robinson, J.2    Deere, D.3    Saunders, J.R.4    Edwards, C.5    Porter, J.6
  • 18
    • 0029766232 scopus 로고    scopus 로고
    • Nested PCR protocol for the rapid detection of Escherichia coli in potable water
    • Juck, D., Ingram, J., Prevost, M., Coallier, J., and Greer, C. 1996. Nested PCR protocol for the rapid detection of Escherichia coli in potable water. Can. J. Microbiol., 42: 862-866.
    • (1996) Can. J. Microbiol. , vol.42 , pp. 862-866
    • Juck, D.1    Ingram, J.2    Prevost, M.3    Coallier, J.4    Greer, C.5
  • 19
    • 0025724961 scopus 로고
    • Glycosidase profiles of members of the family Enterobacteriaceae
    • Kampfer, P., Rauhoff, D., and Dott, W. 1991. Glycosidase profiles of members of the family Enterobacteriaceae. J. Clin. Microbiol., 29: 2877-2879.
    • (1991) J. Clin. Microbiol. , vol.29 , pp. 2877-2879
    • Kampfer, P.1    Rauhoff, D.2    Dott, W.3
  • 20
    • 84963847184 scopus 로고
    • Polymerase chain reaction identification of enteroinvasive Escherichia coli seeded into raw milk
    • Keasler, S. and Hill, W. 1992. Polymerase chain reaction identification of enteroinvasive Escherichia coli seeded into raw milk. J. Food Prot., 55: 382-384.
    • (1992) J. Food Prot. , vol.55 , pp. 382-384
    • Keasler, S.1    Hill, W.2
  • 21
    • 0018718214 scopus 로고
    • Rapid identification of Enterobacteriaceae II. Use of a β-glucuronidase-detecting agar medium (PGUA) for the detection of E. coli in primary cultures of urine samples
    • Kilian, M. and Bulow, P. 1979. Rapid identification of Enterobacteriaceae II. Use of a β-glucuronidase-detecting agar medium (PGUA) for the detection of E. coli in primary cultures of urine samples. Acta Pathol. Microbiol. Scand., B87: 271-276.
    • (1979) Acta Pathol. Microbiol. Scand. , vol.B87 , pp. 271-276
    • Kilian, M.1    Bulow, P.2
  • 22
    • 0002500919 scopus 로고    scopus 로고
    • Detection of Pathogenic Escherichia coli in ground beef using multiplex PCR
    • Lett, P. W., Southworth, J. P., Jones, D. D., and Bej, A. K. 1996. Detection of Pathogenic Escherichia coli in ground beef using multiplex PCR. Food Test. Anal., 1: 34-38.
    • (1996) Food Test. Anal. , vol.1 , pp. 34-38
    • Lett, P.W.1    Southworth, J.P.2    Jones, D.D.3    Bej, A.K.4
  • 23
    • 0028294870 scopus 로고
    • Organization and expression of the Escherichia coli K-12 dad operon encoding the smaller subunit of D-amino acid dehydrogenase and the catabolic alanine racemase
    • Lobocka, M., Hennig, J. , Wild, J., and Klopotowski, T. 1994. Organization and expression of the Escherichia coli K-12 dad operon encoding the smaller subunit of D-amino acid dehydrogenase and the catabolic alanine racemase. J. Bacteriol., 176: 1500-1510.
    • (1994) J. Bacteriol. , vol.176 , pp. 1500-1510
    • Lobocka, M.1    Hennig, J.W.J.2    Klopotowski, T.3
  • 25
    • 0026678203 scopus 로고
    • Inhibition of PCR by components of food samples, microbial diagnostic assays and DNA-extraction solutions
    • Rossen, L., Norskov, P., and Holmstron, K. 1992. Inhibition of PCR by components of food samples, microbial diagnostic assays and DNA-extraction solutions. Int. J. Food Microbiol.: 17, 37-45.
    • (1992) Int. J. Food Microbiol. , vol.17 , pp. 37-45
    • Rossen, L.1    Norskov, P.2    Holmstron, K.3
  • 26
    • 0031032448 scopus 로고    scopus 로고
    • Determination of the structure of alanine racemase from Bacillus stearothermophilus at 1.9-Å resolution
    • Shaw, J. P., Petsko, G. A., and Ringe, D. 1997. Determination of the structure of alanine racemase from Bacillus stearothermophilus at 1.9-Å resolution. Biochemistry, 36: 1329-1342.
    • (1997) Biochemistry , vol.36 , pp. 1329-1342
    • Shaw, J.P.1    Petsko, G.A.2    Ringe, D.3
  • 27
    • 0023857740 scopus 로고
    • Thermostable alanine racemase from Bacillus stearothermophilus: DNA and protein sequence determination and secondary structure prediction
    • Tanizawa, K., Ohshima, A., Scheidegger, A., Inagaki, K., Tanaka, H., and Soda, K. 1988. Thermostable alanine racemase from Bacillus stearothermophilus: DNA and protein sequence determination and secondary structure prediction. Biochemistry, 27: 1311-1316.
    • (1988) Biochemistry , vol.27 , pp. 1311-1316
    • Tanizawa, K.1    Ohshima, A.2    Scheidegger, A.3    Inagaki, K.4    Tanaka, H.5    Soda, K.6
  • 29
    • 0029903296 scopus 로고    scopus 로고
    • Comparison of commercially available kits with standard methods for detection of coliforms and Escherichia coli in foods
    • Venkateswaren, K., Murakoshi, A., and Satake, M. 1996. Comparison of commercially available kits with standard methods for detection of coliforms and Escherichia coli in foods. Appl. Environ. Microbiol., 62: 2236-2243.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2236-2243
    • Venkateswaren, K.1    Murakoshi, A.2    Satake, M.3
  • 30
    • 0021769534 scopus 로고
    • Catabolic alanine racemase from Salmonella typhimurium: DNA sequence, enzyme purification and characterization
    • Wasserman, S. A., Daub, E., Grisafi, P., Botstein, D., and Walsh, C. T. 1984. Catabolic alanine racemase from Salmonella typhimurium: DNA sequence, enzyme purification and characterization. Biochemistry, 23: 5182-5187.
    • (1984) Biochemistry , vol.23 , pp. 5182-5187
    • Wasserman, S.A.1    Daub, E.2    Grisafi, P.3    Botstein, D.4    Walsh, C.T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.