Immobilization of oligonucleotides on a large pore support for plasmid purification by triplex affinity interaction

Bioseparation

Volumn 7, Issue 6, 1998, Pages 317-326

  Schluep, Thomas ^a,b   Cooney, Charles L ^a  

^a Massachusetts Institute of Technology Cambridge   (United States)

^b MERCK RESEARCH LABORATORIES   (United States)

Author keywords

Affinity; Chromatography; DNA; Immobilization; Oligonucleotides; Plasmid

Indexed keywords

DNA PURIFICATION; NUCLEIC ACID IMMOBILIZATION; PLASMID DNA; TRIPLEX AFFINITY INTERACTION;

DNA SEQUENCES; GENETIC ENGINEERING; OLIGOMERS; PURIFICATION;

OLIGONUCLEOTIDE; PLASMID PURIFICATION;

CELL IMMOBILIZATION;

EID: 0032836030     PISSN: 0923179X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (31)

1. Alberts B and Herrick G (1971) DNA-cellulose chromatography. In: Sauer RT (ed.) Methods Enzymol. Vol. 21 (pp. 198-217). Academic Press, San Diego.
2. Antoni G, Presentini R and Neri P (1983) A simple method for the estimation of amino groups on insoluble matrix beads. Anal. Biochem. 129: 60-63.
3. Atherton E and Sheppard RC (1989) Solid Phase Peptide Synthesis. IRL Press, Oxford.
4. Bischoff R, Coull JM and Regnier FE (1987) Introduction of 5′-terminal functional groups into synthetic oligonucleotides for selective immobilization. Anal. Biochem. 164: 336-344.
5. Borch RF, Bernstein MD and Durst HD (1971) The cyanohydridoborate anion as a selective reducing agent. J. Am. Chem. Soc. 93: 2897-2904.
6. Cuatrecasas P (1970) Protein purification by affinity chromatography. J. Biol. Chem. 245: 3059-3065.
7. Ellegren H and Låås T (1989) Size-exclusion chromatography of DNA restriction fragments. J. Chromatogr. 467: 217.
8. FDA (1996) Addendum to the points to consider in human somatic cell and gene therapy (1991). Hum. Gene Ther. 7: 1181-1190.
9. Frank-Kamenetskii MD and Mirkin SM (1995) Triplex DNA structures. Annu. Rev. Biochem. 64: 65-95.
10. Gilham PT (1971) The covalent binding of nucleotides, polynucleotides, and nucleic acids to cellulose. In: Grossman L and Moldove K (eds.) Methods Enzymol. Vol. 21, Part D (pp. 191-197). Academic Press, New York.
11. Hagel L, Östberg M and Andersson T (1996) Apparent pore size distributions of chromatography media. J. Chromatogr. A 743: 33-42.
12. Horn NA, Meek JA, Budhazi G and Marquet M (1995) Cancer gene therapy using plasmid DNA: Purification of DNA for human clinical tests. Hum. Gene Ther 6: 565-573.
13. Kadonaga JT (1991) Purification of sequence-specific binding protein by DNA affinity cromatography. In: Sauer RT (ed.) Methods Enzymol. Vol. 208 (pp. 10-23). Academic Press, San Diego.
14. King EJ (1932) The colorimetric determination of phosphorous. Biochem. J. 26: 292-297.
15. Kohn J and Wilcheck M (1984) The use of cyanogen bromide and other novel cyanylating agents for the activation of polysaccharide resins. Appl. Biochem. Biotechnol. 9: 285-305.
16. Kremsky JN, Wooters JL, Dougherty JP, Meyers RE, Collins M and Brown EL (1987) Immobilization of DNA via oligonucleotides containing an aldehyde or carboxylic acid group at the 5′ terminus. Nucleic Acids Res. 15: 2891-2909.
17. Lamed R, Levin Y and Wilchek M (1973) Covalent coupling of nucleotides to agarose for affinity chromatography. Biochim. Biophys. Acta 304: 231-235.
18. Ledley FD (1995) Nonviral gene therapy: The promise of genes as pharmaceutical products. Hum. Gene Ther. 6: 1129-1144.
19. March SC, Parikh I and Cuatrecasas P (1974) A simplified method for cyanogen bromide activation of agarose for affinity chromatography. Anal. Biochem. 60: 149-152.
20. Marquet M, Horn NA and Meek JA (1995) Process development for the manufacture of plasmid DNA vectors for use in gene therapy. BioPharm: 26-37.
21. McDonnell WM and Askari FK (1996) DNA vaccines. N. Engl. J. Med. 334: 42-45.
22. Pharmacia Biotech (1996) BioDirectory. Piscataway, NJ.
23. Pieles U, Zürcher W, Schär M and Moser HE (1993) Matrix-assisted laser desorption ionisation time-of-flight mass spectrometry: A powerful tool for the mass and sequence analysis of natural and modified oligonucleotides. Nucleic Acids Res. 21: 3191-3196.
24. Prazeres DM, Schluep T and Cooney CL (1998) Preparative purification of supercoiled plasmid DNA using anion-exchange chromatography. J. Chromatogr. A 806: 31-45.
25. Pungor E, Afeyan NB, Gordon NF and Cooney CL (1987) Continuous affinity-recycle extraction: A novel protein separation technique. Bio/Technology 5: 604-608.
26. Rasmussen SR, Larsen MR and Rasmussen SE (1991) Covalent immobilization of DNA onto polystyrene microwells: The molecules are only bound at the 5′ end. Anal. Biochem. 198: 138-142.
27. Schluep T and Cooney CL (1998) Purification of plasmids by triplex affinity interaction. Nucleic Acids Res. 26: 4524-4528.
28. Schott H (1984) Affinity chromatography. Marcel Dekker, New York.
29. Shabarova Z and Bogdanov A (1994) Advanced Organic Chemistry of Nucleic Acids. VCH Verlagsgesellschaft, Weinheim.
30. Turkova J (1993) Bioaffinity chromatography. Elsevier, Amsterdam-London-New York-Tokyo.
31. Wils P, Escriou V, Warnery A, Lacroix F, Lagneau D, Ollivier M, Crouzet J, Mayaux J-F and Scherman D (1997) Efficient purification of plasmid DNA for gene transfer using triple-helix affinity chromatography. Gene Therapy 4: 323-330.