A genetic analysis of quantitative resistance to late blight in potato: Towards marker-assisted selection

Molecular Breeding

Volumn 5, Issue 5, 1999, Pages 399-415

  Oberhagemann, Petra ^a   Chatot Balandras, Catherine ^b   Schäfer Pregl, Ralf ^a   Wegener, Dorothee ^a   Palomino, Carmen ^a   Salamini, Francesco ^a   Bonnel, Eric ^b   Gebhardt, Christiane ^a  

^a MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH   (Germany)

^b GERMICOPA   (France)

Author keywords

Late blight; Marker assisted selection; Potato; Quantitative resistance

Indexed keywords

DISEASE RESISTANCE; GENETIC ANALYSIS; LATE BLIGHT; OLIGONUCLEOTIDE PROBE; PLANT BREEDING; PLANT GENETICS; POLYMERASE CHAIN REACTION; POTATO; QUANTITATIVE TRAIT LOCUS;

OLIGONUCLEOTIDES; PLANTS (BOTANY); POLYMERASE CHAIN REACTION; TUBES (COMPONENTS);

FUNGAL DISEASE; GENETIC ANALYSIS; LATE BLIGHT; MARKER-ASSISTED SELECTION; OOMYCETES; P. INFESTANS; PHYTOPHTHORA INFESTANS; POTATO; QUANTITATIVE RESISTANCE; QUANTITATIVE TRAIT LOCUS;

GENES;

EMBRYOPHYTA; FUNGI; PHYTOPHTHORA INFESTANS; SOLANUM TUBEROSUM;

EID: 0032820077     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1009623212180     Document Type: Article

References (38)

1. Becker-Andre M, Schulze-Lefert P, Hahlbrock K: Structural comparison, modes of expression, and putative cis-acting elements of the two 4-coumarate:CoA ligase genes in potato. J Biol Chem 266: 8551-855 (1991).
2. Bendahmane A, Kanyuka K, Baulcombe DC: High resolution genetical and physical mapping of the Rx gene for extreme resistance to potato virus X in tetraploid potato. Theor Appl Genet 95: 153-162 (1997).
3. Bianchi A, Morandi A: A case of balanced lethal factors in maize. Heredity 17: 409-414 (1962).
4. Cohen Y, Reuveni M: Occurrence of metalaxyl-resistant isolates of Phytophthora infestans and of genes controlling immunity in Solanum demissum derivatives. Euphytica 2: 173-240 (1983).
5. Collins A, Milbourne D, Ramsay L, Meyer R, Chatot-Balandras C, Oberhagemann P, de Jong W, Gebhardt C, Bonnel E, Waugh R: QTL for field resistance to late blight in potato are strongly correlated with earliness and vigour. Mol Breed 0: 000-000 (1999).
6. de Jong W, Forsyth A, Leister D, Gebhardt C, Baulcombe DC: A potato hypersensitive resistance gene against potato virus X maps to a resistance gene cluster on chromosome 5. Theor Appl Genet 95: 246-252 (1997).
7. Dowley LJ, Carnegie SF, Balandras-Chatot C, Ellisseche D, Gans P, Schober-Butin B, Wustman R: Guide-line for the evaluation of potato cultivars for resistance to foliage blight (field test). Proceedings EAPR Pathology Meeting, Umea (Sweden) (1998).
8. El-Kharbotly A, Leonards-Schippers C, Huigen DJ, Jacobsen E, Pereira A, Stiekema WJ, Salamini F, Gebhardt C: Segregation analysis and RFLP mapping of the R1 and R3 alleles conferring race-specific resistance to Phytophthora infestans in progeny of dihaploid potato parents. Mol Gen Genet 242: 749-754 (1994).
9. El-Kharbotly A, Palomino-Sánchez C, Salamini F, Jacobsen E, Gebhardt C: R6 and R7 alleles of potato conferring race-specific resistance to Phytophthora infestans (Mont.) de Bary identified genetic loci clustering with the R3 locus on chromosome XI. Theor Appl Genet 92: 880-884 (1996).
10. Feinberg AP, Vogelstein B: A technique for radio labeling DNA restriction endonuclease fragments to high specific activity (Addendum). Anal Biochem 137: 266-267 (1984).
11. Feltkamp D, Masterson R, Starke J, Rosahl S: Analysis of the involvement of ocs-like bZip-binding elements in the differential strength of the bidirectional mas 1′1′ promoter. Plant Physiol 105: 259-268 (1994).
12. Fritzemeier K-H, Cretin C, Kombrink E, Rohwer F, Taylor J, Scheel D, Hahlbrock K: Transient induction of phenylalanine ammonia-lyase and 4-coumarate:CoA ligase mRNAs in potato leaves infected with virulent or avirulent races of Phytophthora infestans. Plant Physiol 85: 34-41 (1987).
13. Gebhardt C, Ritter E, Debener T, Schachtschabel U, Walkemeier B, Uhrig H, Salamini F: RFLP analysis and linkage mapping in Solanum tuberosum. Theor Appl Genet 78: 65-75 (1989).
14. Gebhardt C, Ritter E, Barone A, Debener T, Walkemeier B, Schachtschabel U, Kaufmann H, Thompson RD, Bonierbale MW, Ganal MW, Tanksley SD, Salamini F: RFLP maps of potato and their alignment with the homoeologous tomato genome. Theor Appl Genet 83: 49-57 (1991).
15. Gebhardt C, Ritter E, Salamini F: RFLP map of the potato. In: Phillips RL, Vasil IK (eds) DNA-Based Markers in Plants, pp. 271-285. Kluwer Academic Publishers, Dordrecht/Boston/ London (1994).
16. Gebhardt C, Eberle B, Leonards-Schipppers C, Walkemeier B, Salamini F: Isolation, characterization and RFLP linkage mapping of a DNA repeat family of Solanum spegazzinii by which chromosome ends can be localized on the genetic map of potato. Genet Res Camb 65: 1-10 (1995).
17. Johal GS, Hulbert SH, Briggs SP: Disease lesion mimics of maize: a model for cell death in plants. BioEssays 17: 685-692 (1995).
18. Leister D, Ballvora A, Salamini F, Gebhardt C: A PCR-based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Nature Genet 14: 421-429 (1996).
19. Leonards-Schippers C, Gieffers W, Salamini F, Gebhardt C: The R1 gene conferring race-specific resistance to Phytophthora infestans in potato is located on potato chromosome V. Mol Gen Genet 233: 278-283 (1992).
20. Leonards-Schippers C, Gieffers W, Schäfer-Pregl R, Ritter E, Knapp SJ, Salamini F, Gebhardt C: Quantitative resistance to Phytophthora infestans in potato: a case study for QTL mapping in an allogamous plant species. Genetics 137: 67-77 (1994).
21. Li X, van Eck HJ, Rouppe van der Voort JNAM, Huigen DJ, Stam P, Jacobsen E: Autotetraploids and genetic mapping using common AFLP markers: the R2 allele conferring resistance to Phytophthora infestans mapped on potato chromosome 4. Theor Appl Genet 96: 1121-1128 (1998).
22. Logemann J, Mayer JE, Schell J, Willmitzer L: Differential expression of genes in potato tubers after wounding. Proc Natl Acad Sci USA 85: 1136-1140 (1988).
23. Mann HB, Whitney DR: On a test of wether one of two random variables is stochastically larger than the other. Ann Math Statist 18: 50-60 (1947).
24. Martin GB, Brommonschenkel SH, Chunwongse J, Frary A, Ganal MW, Spivey R, Wu T, Earle ED, Tanksley SD: Map based cloning of a protein kinase gene conferring disease resistance in tomato. Science 262: 1432-1436 (1998).
25. Meksem K, Leister D, Salamini F, Gebhardt C: A high resolution map of chromosome V of potato based on RFLP and AFLP markers in the vicinity of the R1 locus. Mol Gen Genet 249: 74-81 (1995).
26. Milbourne D, Meyer R, Collins A, Ramsay L, Gebhardt C and Waugh R: Isolation, characterization and mapping of simple sequence repeat loci in potato. Mol Gen Genet 259: 233-245 (1998).
27. Niewöhner J, Salamini F, Gebhardt C: Development of PCR assays diagnostic for RFLP marker alleles closely linked to alleles Gro1 and H1, conferring resistance to the root cyst nematode Globodera rostochiensis in potato. Mol Breed 1: 65-78 (1995).
28. Robertson DS: A possible technique for isolating genomic DNA for quantitative traits in plants. J Theor Biol 117: 1-10 (1985).
29. Ross H: Potato breeding: problems and perspectives. J Plant Breed, Suppl. 13 (1986).
30. Saiki RK, Gelfand DH, Stoffel S, Scharf SJ, Higuchi R, Horn GT, Mullis KB, Erlich HA: Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239: 487-491 (1988).
31. SAS Institute INC., SAS Language: Reference, Version 6, 4th ed., vol. 2, 1042 pp. SAS Institute, Cary, NC (1990).
32. Schäfer-Pregl R, Ritter E, Concilio L, Hesselbach J, Lovatti L, Walkemeier B, Thelen H, Salamini F, Gebhardt C: Analysis of quantitative trait loci (QTL) and quantitative trait alleles (QTA) for potato tuber yield and starch content. Theor Appl Genet 97: 834-846 (1998).
33. SPSS® Inc.: Base System Syntax Reference Guide, Release 5.0 (1992).
34. Tanksley SD, Ganal MW, Prince JP, de Vicente MC, Bonierbale MW, Broun P, Fulton TM, Giovannoni JJ, Grandillo S, Martin GB, Messeguer R, Miller JC, Miller L, Paterson AH, Pineda O, Röder MS, Wing RA, Wu W, Young DN: High density molecular linkage maps of the tomato and potato genomes. Genetics 132: 1141-1160 (1992).
35. Taylor JT, Fritzemeier H, Häuser I, Kombrink E, Rohwer F: Structural analysis and activation by fungal infection of a gene encoding a pathogenesis-related protein in potato. Mol Plant-Microbe Interact 3: 72-77 (1990).
36. Van der Leij FR, Visser RG, Ponstein AS, Jacobsen E, Feenstra WJ: Sequence of the structural gene for granule-bound starch synthase of potato (Solanum tuberosum L.) and evidence for a single point deletion in the amf allele. Mol Gen Genet 228: 240-248 (1991).
37. Wastie RL: Breeding for resistance. In: Ingram DS, Williams PH (eds), Advances in Plant Pathology 7. Phytophthora infestans, the cause of late blight of potato, pp. 193-223. Academic Press, London (1991).
38. Wemmer T, Kaufmann H, Kirch H-H, Schneider K, Lottspeich F, Thompson RD: The most abundant soluble basic protein of the stylar transmitting tract in potato (Solanum tuberosum L.) is an endochitinase. Planta 194: 264-273 (1994).