Transcriptional analysis of the cyclophilin A gene (cypA) of Streptomyces chrysomallus

FEMS Microbiology Letters

Volumn 178, Issue 1, 1999, Pages 39-45

  Berger, Rico ^a   Schauwecker, Florian ^a   Keller, Ullrich ^a  

^a TECHNISCHE UNIVERSITÄT BERLIN   (Germany)

Author keywords

Cyclophilin; Leaderless mRNA; PPIase; Streptomyces chrysomallus

Indexed keywords

CYCLOPHILIN;

ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; GROWTH CURVE; NONHUMAN; NORTHERN BLOTTING; PRIORITY JOURNAL; START CODON; STREPTOMYCES; TRANSLATION INITIATION; WESTERN BLOTTING;

BASE SEQUENCE; BLOTTING, NORTHERN; BLOTTING, WESTERN; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; PEPTIDYLPROLYL ISOMERASE; REGULATORY SEQUENCES, NUCLEIC ACID; RNA, BACTERIAL; RNA, MESSENGER; SEQUENCE ALIGNMENT; STREPTOMYCES; TRANSCRIPTION, GENETIC;

STREPTOMYCES CHRYSOMALLUS; STREPTOMYCES LIVIDANS;

EID: 0032814963     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1097(99)00340-7     Document Type: Article

References (24)

1. Fischer, G. (1994) Peptidyl-prolyl cisltrans isomerases and their effectors. Angew. Chem. Int. Ed. 33, 1415-1436.
2. Dolinski, K. and Heitman, J. (1997) Peptidyl-prolyl isomerases (PPIases). In: Molecular Chaperones and Protein Catalysts (Tooze, S., Ed.). Oxford University Press, London.
3. Fischer, G., Wittmann-Liebold, B., Lang, K., Kiefhaber, T. and Schmid, F.X. (1989) Cyclophilin and peptidyl-prolyl cis-trans isomerase are probably identical proteins. Nature 337, 476-478.
4. Duina, A.A., Chang, J.H.-C., Marsh, J.A., Lindquist, S. and Gaber, R. F. (1996) A cyclophilin function in HSP90-dependent signal transduction. Science 274, 1713-1716.
5. Schreiber, S.L. and Crabtree, G.R. (1992) The mechanism of action of cyclosporin A and FK506. Immunol. Today 13, 136-142.
6. High, K.P. (1995) The antimicrobial effect of cyclosporine, FK506 and rapamycin. Transplantation 57, 1689-1700.
7. Kleerebezem, M., Heutnik, M. and Tommassen, J. (1995) Characterization of an Escherichia coli rotA mutant, affected in periplasmic peptidyl-prolyl cis-trans isomerase. Mol. Microbiol. 18, 18313-18320.
8. Göthel, S.F., Scholz, C., Schmid, F.X. and Marahiel, M.A. (1998) Cyclophilin and trigger factor from Bacillus subtilis catalyze in vitro protein folding and are necessary for viability under starvation conditions. Biochemistry 37, 13392-13399.
9. Schmidt, B., Tradler, T., Rahfeld, J.U., Ludwig, B., Jain, B., Mann, K., Rücknagel, K.P., Janowski, B., Schierhorn, A., Küllertz, G., Hacker, J. and Fischer, G. (1996) A cyclophilin-like peptidyl-prolyl cisltrans isomerase from Legionella pneumophila: characterization, molecular cloning and overexpression. Mol. Microbiol. 6, 1147-1160.
10. Pahl, A., Ühlein, M., Bang, H., Schlumbohm, W. and Keller, U. (1992) Streptomycetes possess peptidyl-prolyl cis-trans isomerases that strongly resemble cyclophilins from eukaryotic organisms. Mol. Microbiol. 6, 3551-3558.
11. Pahl, A., Gewies, A. and Keller, U. (1997) ScCypB is a novel second cytosolic cyclophilin from Streptomyces chrysomallus which is phylogenetically distant from ScCypA. Microbiology 143, 117-126.
12. Keller, U., Krengel, U. and Haese, A. (1985) Genetic analysis in Streptomyces chrysomallus. J. Gen. Microbiol. 131, 1181-1191.
13. Hopwood, D.A., Bibb, M.J., Chater, K.F., Kieser, T., Bruton, C.J., Kieser, H.M., Lydiate, D.J., Smith, C.P., Ward, J.M. and Schrempf, H. (1985) Genetic Manipulation of Streptomyces: A Laboratory Manual. The John Innes Foundation, Norwich.
14. Sambrook, J., Fritsch, E.F. and Manniatis, T. (1992) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
15. Mead, D.A., Szczesna-Skorupa, E. and Kemper, B. (1986) Single-stranded DNA 'blue' T7 promoter plasmids: a versatile tandem promoter system for cloning and protein engineering. Protein Eng. 1, 67-74.
16. Schägger, H. and von Jagow, G. (1987) Tricine sodium dodecyl sulfate polyacrylamide gel electrophoresis for separation of proteins in the range from 1 to 100 kDa. Anal. Biochem. 166, 368-379.
17. Berger, R., Hoffmann, M. and Keller, U. (1998) Molecular analysis of a gene encoding a cell-bound esterase from Streptomyces chrysomallus. J. Bacteriol. 180, 6396-6399.
18. Strohl, W.R. (1992) Compilation and analysis of DNA sequences associated with apparent Streptomyces promoters. Nucleic Acids Res. 20, 473-475.
19. deHaseth, P.L., Zupancic, M.L. and Record Jr., M.T. (1998) RNA polymerase-promoter interactions: the comings and goings of RNA polymerase. J. Bacteriol. 180, 3019-3025.
20. Kang, J.G., Hahn, M.J., Ishihama, A. and Roe, J.H. (1997) Identification of sigma factors for growth phase-related promoter selectivity of RNA polymerases from Streptomyces coelicolor A3. Nucleic Acids Res. 25 (2), 2555-2573.
21. Stein, D.S., Kendall, K.J. and Cohen, S.N. (1989) Identification and analysis of transcriptional regulatory signals for the kil and kor loci of Streptomyces plasmid pIJ101. J. Bacteriol. 171, 5768-5775.
22. Suzuki, Y. and Yamada, T. (1988) The nucleotide sequence of 16S rRNA gene from Streptomyces lividans TK21. Nucleic Acids Res. 16, 370.
23. Janssen, G.R. (1993) Eubacterial, archaebacterial, and eukaryotic genes that encode leaderless mRNA. In: Industrial Microorganisms: Basic and Applied Molecular Genetics (Baltz, R.H., Hegeman, G.D. and Skatrud, P.L., Eds.), pp. 59-67. American Society for Microbiology, Washington, DC.
24. Sprengart, M.L., Fatscher, H.P. and Fuchs, E. (1990) The initiation of translation in E. coli apparent base pairing between the 16S rRNA and downstream sequences of the mRNA. Nucleic Acids Res. 18, 1719-1723.