Design of division specific primers of Ralstonia solanacearum and application to the identification of European isolates

European Journal of Plant Pathology

Volumn 105, Issue 4, 1999, Pages 373-380

  Boudazin, Geneviève ^a   Le Roux, Anne Claire ^b   Josi, Karine ^a   Labarre, Philippe ^c   Jouan, Bernard ^b  

^a CEMAGREF   (France)

^b INRA   (France)

^c Lab Natl la Protect des Vegetaux   (France)

Author keywords

16S rRNA gene; Diagnosis; PCR; Ralstonia solanacearum

Indexed keywords

BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; EUROPE; GENE SEQUENCING; POLYMERASE CHAIN REACTION; RIBOSOMAL RNA;

RALSTONIA SOLANACEARUM;

EID: 0032787702     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1008763111230     Document Type: Article

References (23)

1. Anonymous (1992) EPPO/CABI Pseudomonas solanacearum. In: IM Smith, DG McNamara, PR Scott and KM Harris (eds) Quarantine Pests for Europe (pp 776-783) CAB International, Wallingford, United Kingdom
2. Anonymous (1997) Situation de Ralstonia solanacearum dans la région OEPP. OEPP/EPPO Bull 6: Article 97-111
3. Baharuddin B, Rudolph K and Niepold F (1994) Production of monospecific antiserum against the blood disease affecting banana and plantain. Phytopathology 84: 570-575
4. Buddenhagen IW (1986) Bacterial wilt revisited. In: GJ Persley (eds) Bacterial Wilt Disease in Asia and the South Pacific, No 13 (pp 126-143). ACIAR, Canberra, Australia
5. Ciampi L, Sequeira L and French ER (1980) Latent infection of potato tubers by Pseudomonas solanacearum. Am Potato J 57: 377-386
6. Cook D, Barlow L and Sequeira L (1989) Genetic diversity of Pseudomonas solanacearum: detection of restriction fragment length polymorphisms with DNA probes that specify virulence and the hypersensitive response. Mol Plant Microbe Interact 2: 113-121
7. Cook D and Sequeira L (1991) The use of substractive hybridization to obtain a DNA probe specific for Pseudomonas solanacearum race 3. Mol Gen Genet 227: 401-410
8. Fegan M, Taghavi M, Sly LI and Hayward AC (1998a) Phylogeny, diversity and molecular diagnostics of Ralstonia solanacearum. In: P Prior, C Allen and Elphinstone (eds) Bacterial Wilt Disease, Molecular and Ecological Aspects, (pp 19-33) INRA, Paris
9. Fegan M, Holoway G, Hayward AC and Timmis J (1998) Development of a diagnostic test based on the polymerase chain reaction (PCR) to identify strains of R. solanacearum exhibiting the biovar 2 genotype. In: P Prior, C Allen and Elphinstone (eds) Bacterial Wilt Disease, Molecular and Ecological Aspects, (pp 34-43) INRA Paris
10. Gillings M and Fahy P (1993) Genomic fingerprinting and PCR analysis: rapid, sensitive and inexpensive means of differentiating strains of Pseudomonas solanacearum. In: GL Hartman and AC Hayward (eds) Bacterial Wilt: Proceedings of an International Conference held in Kaohsiung, Taiwan (1992), (pp 85-92) ACIAR proceedings 45. Australian Centre for International Agricultural Research, Canberra
11. Hayward (1991) Biology and epidemiology of bacterial wilt caused by Pseudomonas solanacearum. Annu Rev Phytopathol 29: 65-87
12. Hayward AC (1994) Systematics and phylogeny of Pseudomonas solanacearum and related bacteria. In: AC Hayward and GL Hartman (eds) Bacterial Wilt. The Disease and its Causative Agent, Pseudomonas solanacearum (pp 123-135) CAB International, Wallingford, United Kingdom
13. Li X, Dorsch M, Del Dot T, Sly LI, Stackebrandt E and Hayward AC (1993) Phylogenetic studies of the rRNA group II pseudomonads based on 16S rRNA gene sequences. J Appl Bacteriol 74: 324-329
14. Nyangeri JB, Gatthuru EM and Mukunya DM (1984) Effect of latent infection on the spread of bacterial wilt of potatoes in Kenya. Tropical Pest Management 30: 163-165
15. Olsson K (1976) Experience of brown rot caused by Pseudomonas solanacearum (Smith). Smith in Sweden. OEPP/EPPO Bull. 6: 199-207
16. Roberts SJ, Eden-Green J, Jones P and Ambler DJ (1990) Pseudomonas syzygii sp. Nov., the cause of Sumatra disease of cloves. Syst Appl Microbiol 13: 34-43
17. Seal SE, Jackson LA and Daniels MJ (1992) Isolation of a Pseudomonas solanacearum specific DNA probe by subtractive hybridisation and construction of species-specific oligonucleotide primers for sensitive detection by the polymerase chain reaction. Appl Environ Microbiol 58: 3751-3758
18. Seal SE, Jackson LA, Young JPW and Daniels MJ (1993) Differentiation of Pseudomonas solanacearum, Pseudomonas syzygii, Pseudomonas pickettii and the blood disease bacterium by partial 16S rRNA sequencing: construction of oligonucleotide primers for sensitive detection by polymerase chain reaction. J Gen Microbiol 139: 1587-1594
19. Smith JJ, Offord LC, Holderness M and Saddler GS (1995) Genetic diversity of Burkholderia solanacearum (Pseudomonas solanacearum) race 3 in Kenya. Appl Environ Microbiol 61: 4263-4268
20. Taghavi M, Hayward C, Sly LI and Fegan M (1996) Analysis of the phylogenetic relationships of strains of Burkholderia solanacearum, Pseudomonas syzygii and the blood disease bacterium of banana based on 16S rRNA sequences. Int J Syst Bacteriol 46: 10-15
21. Woese CR, Gutell R, Gupta R and Noller HF (1983). Detailed analysis of the higher-order structure of the 16S-like ribosomal ribonucleic acids. Microbiol Rev 47: 621-669
22. Yabuuchi E, Kosako Y, Oyaizu H, Yano I, Hotta H, Hashimoto Y, Ezaki T and Arakawa M (1992) Proposal of Burkholderia gen nov and transfer of seven species of the genus pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes, 1981) Comb Nov Microbiol Immunol 36: 1251-1275
23. Yabuuchi E, Kosako Y, Yano I, Hotta H and Nishiuchi Y (1995) Transfer of two Burkholderia and an Alcaligenes species to Ralstonia Gen Nov: Proposal of Ralstonia pickettii (Ralston et al., 1973) Comb Nov Ralstonia solanacearum (Smith, 1896) Comb Nov and Ralstonia eutropha (Davis, 1969) Comb Nov Microbiol Immunol 39: 897-904