Anchoring of canine linkage groups with chromosome-specific markers

Mammalian Genome

Volumn 10, Issue 8, 1999, Pages 814-823

  Werner, Petra ^a   Mellersh, Cathryn S ^b   Raducha, Michael G ^a   DeRose, Susan ^b   Acland, Gregory M ^c   Prociuk, Ulana ^a   Wiegand, Neil ^b   Aguirre, Gustavo D ^c   Henthorn, Paula S ^a   Patterson, Donald F ^a   Ostrander, Elaine A ^b  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

^b Fred Hutchinson Cancer Research Center   (United States)

^c Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MICROSATELLITE DNA;

ANIMAL TISSUE; ARTICLE; AUTOSOMAL DISORDER; AUTOSOMAL RECESSIVE DISORDER; BREEDING; CHROMOSOME MARKER; COSMID; DOG; FLUORESCENCE IN SITU HYBRIDIZATION; GENE LOCUS; GENE MAPPING; GENETIC ANALYSIS; GENETIC DISORDER; GENETIC LINKAGE; GENOTYPE; NONHUMAN; QUANTITATIVE TRAIT; SPECIES DIFFERENCE; X CHROMOSOMAL INHERITANCE;

ANIMALS; BASE SEQUENCE; DNA PRIMERS; DNA PROBES; DOGS; GENETIC MARKERS; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; LINKAGE (GENETICS); MICROSATELLITE REPEATS; PHYSICAL CHROMOSOME MAPPING; POLYMERASE CHAIN REACTION;

EID: 0032777680     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359901096     Document Type: Article

References (48)

1. Dolf G, Schläpfer J, Parfitt C, Schelling C, Zajac M et al. (1997a) Assignment of the canine microsatellite CanBern1 to canine chromosome 13q21. Anim Genet 28, 156-157
2. Dolf G, Schläpfer J, Schelling C, Jorg H, Ladon D et al. (1997b) Assignment of the canine microsatellite CanBern6 to the canine chromosome group 22 to 38. Anim Genet 28, 453-454
3. Dolf G, Schläpfer J, Switonski M, Stranzinger G, Gaillard C et al. (1998) The highly polymorphic canine microsatellite ZuBeCa4 is localized on canine chromosome 3q15-q18. Anim Genet 29, 403-404
4. Dutra AS, Mignot E, Puck JM (1996) Gene localization and syntenic mapping by FISH in the dog. Cytogenet Cell Genet 74, 113-117
5. Finkenzeller G, Marme D, Hug H (1990) Sequence of human protein kinase C alpha. Nucleic Acids Res 18, 2183
6. Fischer PE, Holmes NG, Dickens HF, Thomas R, Binns MM et al. (1996) The application of FISH techniques for physical mapping in the dog (Canis familiaris). Mamm Genome 7, 37-41
7. Francisco LV, Langston AA, Mellersh CS, Neal CL, Ostrander EA (1996) A class of highly polymorphic tetranucleotide repeats for canine genetic mapping. Mamm Genome 7, 359-362
8. Fredholm M, Winterø AK (1995) Variation of short tandem repeats within and between species belonging to the Canidae family. Mamm Gemone 6, 11-18
9. Ganjam KK, Shibuya H, Stoy SJ, Liu P-C, Ganjam VK et al. (1998) A BstUI PCR/RFLP marker in an intron of the canine fibrillin 1 gene. Anim Genet 29, 240-241
10. Henderson SA, Xu YC, Chien KR (1988) Nucleotide sequence of full length cDNAs encoding rat cardiac myosin light chain-2. Nucleic Acids Res 16, 4722
11. Holmes NG, Mellersh CS, Humphreys SJ, Binns MM, Holliman A et al. (1993) Isolation and characterization of microsatellites from the canine genome. Anim Genet 24, 289-292
12. Holmes NG, Dickens HF, Parker HL, Binns MM, Mellersh CS et al. (1995) Eighteen canine microsatellites. Anim Genet 26, 132-133
13. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ et al. (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1, 174-181
14. Langston AA, Mellersh CS, Neal CL, Ray K, Acland GM et al. (1997) Construction of a panel of canine-rodent hybrid cell lines for use in partitioning of the canine genome. Genomics 46, 317-325
15. Lennon G, Auffray C, Polymeropoulos M, Soares MB (1996) The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression. Genomics 33, 151-152
16. Lincoln SI, Daly M, Lander E (1992) Constructing Genetic Maps with MAPMAKER/EXP3.0, 3rd ed. (Cambridge, Mass. Whitehead Institute)
17. Lingaas F, Sorensen A, Juneja RK, Johansson S, Fredholm M et al. (1997) Towards construction of a canine linkage map: establishment of 16 linkage groups. Mamm Genome 8, 218-221
18. Liu P.-C., Shibuya H, Nonneman D, Katz ML, Johnson GS (1998a) A BscRI PCR/RFLP in an intron of the canine phenol sulfotransferase gene. Anim Genet 29, 329
19. Liu PC, Shibuya H, Katz ML, Johnson GS (1998b) A BsmFI PCR/RFLP in the canine CD19 gene. Anim Genet 29, 64-65
20. Liu PC, Shibuya H, Lubahn DB, Johnson GS (1998c) Polymorphic (CT)(n) microsatellite in an intron of the canine SA-hypertension gene. Anim Genet 29, 72
21. Manly KF (1993) A Macintosh program for storage and analysis of experimental genetic mapping data from recombinant inbred strains. Mamm Genome 4, 303-313
22. Mariat D, Amigues Y, Boscher MY (1998) Eight canine tetranucleotide repeats. Anim Genet 29, 156-157
23. Matise TC, Perlin M, Chakravarti A (1994) Automated construction of genetic linkage maps using an expert system (Multimap): a human genome linkage map. Nat Genet 6, 384-390
24. Mellersh CS, Langston AA, Acland AF, Fleming MA, Ray K et al. (1997) A linkage map of the canine genome. Genomics 46, 326-336
25. Neff MW, Broman KW, Mellersh CS, Ray K, Acland GM et al. (1999) A second generation map of the domestic dog, Canis familiaris. Genetics 151, 803-820
26. O'Brien TX, Lee KJ, Chien KR (1993) Positional specification of ventricular myosin light chain 2 expression in the primitive murine heart tube. Proc Natl Acad Sci USA 90, 5157-5161
27. n markers for genetic mapping in dog. Genomics 16, 207-213
28. Ostrander EA, Mapa FA, Yee M, Rine J (1995) One hundred and one new simple sequence repeat-based markers for the canine genome. Mamm Genome 6, 192-195
29. Patterson DF (1999) Canine Genetic Disease Information System-A Computerized Knowledgebase of Genetic Diseases of the Dog. (St. Louis, Mo.) Mosby-Yearbook in press
30. Patterson DF, Pexieder T, Schnarr WR, Navratil T, Alaili R (1993) A single major-gene defect underlying cardiac conotruncal malformations interferes with myocardial growth during embryonic development: studies in the CTD line of Keeshond dogs. Am J Hum Genet 52, 388-397
31. Perreau J, Lilienbaum A, Vasseur M, Paulin D (1988) Nucleotide sequence of the human vimentin gene and regulation of ils transcription in tissues and cultured cells. Gene 62, 7-16
32. Print C, Hitte C, Vignaux F, Renier C, Jiang Z et al (1998) A whole-genome radiation hybrid map of the dog genome. Genomics 54, 361-378
33. Schelling C, Dolf G, Schläpfer J, Switonski M, Ladon D (1998a) Assignment of the canine microsatellite ZuBeCa5 to canine chromosome 19q7. Anim Genet 29, 409-410
34. Schelling C, Stranzinger G, Dolf G, Schläpfer J, Switonski M (1998b) Assignment of the canine microsatellite ZuBeCa1 to canine chromosome 10q22-q24. Anim Genet 29, 398
35. Schläpfer J, Switonski M, Schelling C, Stranzinger G, Gaillard C et al. (1998) The highly polymorphic canine microsatellite ZuBeCa2 is localized on canine chromosome 1q210-q211. Anim Genet 29, 329
36. Selden JR, Moorehead PS, Oehlert ML, Patterson DF (1975) The Giemsa handing pattern of the canine karyotype. Cytogenet Cell Genet 15, 380-387
37. Shibuya H, Mrad DR, Collins BK, Stoy SJ, Nonneman D et al. (1995) Two polymorphism in the canine beta-A3/A1-crystallin gene, detectable by PCR-RFLP analysis. Anim Genet 26, 277-285
38. Shibuya H, Collins BK, Collier LL, Huang TH, Nonneman D et al. (1996) A polymorphic (GAAA)n microsatellite in a canine Wilms tumor 1 (WT1) gene intron. Anim Genet 27, 59-60
39. Shibuya H, Cassells MW, Huang TH-M, Johnson GS (1998) A polymorphic (TG)n microsatellite in an intron of the canine angiotensin 1 converting enzyme. Anim Genet 29, 66-67
40. Suter N (1998) Isolation and characterisation of canine microsatellites. Ph.D. Thesis, University of Leicester, Leicester, UK.
41. Switonski M, Reimann N, Bosma AA, Long S, Bartnitzke S et al. (1996) Report on the progress of standardization of the G-banded canine (Canis familiaris) karyotype. Chromosome Res 4, 306-309
42. Vignaux F, Priat C, Jouquand S, Hitte C, Jiang Z et al. (1999) Towards a dog radiation hybrid map. J Hered 90, 62-67
43. Werner P, Raducha MG, Prociuk U, Henthorn PS, Patterson DF (1997) Physical and linkage mapping of human chromosome 17 loci to dog chromosome 9 and 5. Genomics 42, 74-82
44. Werner P, Raducha MG, Prociuk U, Lyons LA, Kehler JS et al. (1998) RXRA and HSPA5 map to the telomeric end of dog chromosome 9. Anim Genet 29, 220-223
45. Werner P, Raducha MG, Prociuk U, Henthorn PS, Patterson DF (1999a) A comparative approach to physical and linkage mapping of genes on canine chromosomes using gene-associated simple sequence repeat polymorphisms: illustrated by studies of dog chromosome. J Hered 90, 39-42
46. Werner P, Raducha MG, Prociuk U, Budarf M, Henthorn PS et al. (1999b) Comparative mapping of the DiGeorge region in the dog and exclusion or linkage to inherited canine conotruncal defects. J Hered in press
47. Zeiss CJ, Trepanier LA, Aguirre GD, Ray K (1998) A highly conserved microsatellite in the dystrophin gene of diverse mammalian species. Anim Genet 29, 224-227
48. Zhou T, Nonneman D, Shibuya H, Khan S, Liu P-C et al. (1998) An AvaII PCR/RFLP in an exon of the canine gene for the beta subunit of the amiloride-sensitive sodium channel (SCNNIB). Anim Genet 29, 239