Capillary affinity gel electrophoresis: New technique for specific recognition of DNA sequence and the mutation detection on DNA

Journal of Biochemical and Biophysical Methods

Volumn 41, Issue 2-3, 1999, Pages 91-101

  Baba, Yoshinobu ^a  

^a UNIVERSITY OF TOKUSHIMA   (Japan)

Author keywords

Affinity; Capillary electrophoresis; DNA; Mutation detection; Reviews

Indexed keywords

DNA; DNA BASE; DNA FRAGMENT;

AFFINITY LABELING; ANALYTIC METHOD; CAPILLARY ELECTROPHORESIS; DNA SEQUENCE; GEL ELECTROPHORESIS; GENE; GENE MUTATION; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REVIEW; TECHNIQUE; THEORY;

EID: 0032753075     PISSN: 0165022X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0165-022X(99)00040-8     Document Type: Article

References (31)

1. Wadman M. Human Genome Project aims to finish 'working draft' next year. Nature. 398:1999;177.
2. Masood E. Consortium plans free SNP map of human genome. Nature. 398:1999;545-546.
3. Saegusa A. Japan to launch ambitious genome project. Nature. 400:1999;6.
4. Baba Y. From genomics to genomic drug discovery. Eur J Pharm Sci 1999;8:in press.
5. Baba Y. Analysis of disease-causing genes and DNA-based drugs by capillary electrophoresis toward DNS diagnosis and gene therapy for human diseases. J. Chromatogr. B. 687:1996;271-302.
6. Righetti P.G., Gelfi C. Analysis of clinically relevant, diagnostic DNA by capillary zone and double-gradient gel slab electrophoresis. J. Chromatogr. A. 806:1998;97-112.
7. Baba Y. Capillary affinity gel electrophoresis. Mol. Biotechnol. 6:1996;143-153.
8. Baba Y. Capilary affinity gel electrophoresis. Mitchelson K., Cheng J. Capillary Electrophoresis of Nucleic Acids. 1999;Humana Press, Totowa, NJ.
9. Righetti P.G., Gelfi C. Capillary electrophoresis of DNA. Righetti P.G. Capillary Electrophoresis in Analytical Biotechnology. 1996;461 CRC Press, Boca Raton FL. Ch. 10.
10. Chu Y.-H., Avila L.Z., Gao J., Whitesides G.M. Affinity capillary electrophoresis. Acc. Chem. Res. 28:1995;461-468.
11. Baba Y., Tsuhako M., Sawa T., Yashima E., Akashi M. Specific base-recognition of oligodeoxynucleotides by capillary affinity gel electrophoresis using polyacrylamide-poly(9-vinyladenine) conjugated gel. Anal. Chem. 64:1992;1920-1925.
12. Akashi M., Sawa T., Baba Y., Tsuhako M. Specific separation of oligodeoxynucleotides by capillary affinity gel electrophoresis using poly(9-vinyladenine)-polyacrylamide conjugated gel. J. High Resolut. Chromatogr. 15:1992;625-626.
13. Sawa T., Akashi M., Baba Y., Tsuhako M. Recognition of d(TTTATT) and d(TTATTT) by capillary affinity gel electrophoresis using poly(9-vinyladenine)-polyacrylamide conjugated gel. Nucleic Acids Res. Symp. Ser. 27:1992;51-52.
14. Baba Y., Tomisaki R., Tsuhako M., Sawa T., Inami A., Kishida A., Akashi M. Detection of mismatch positions on the DNA-polyvinyladenine hybrids using capillary affinity gel electrophoresis. Nucleic Acids Res. Symp. Ser. 29:1993;81-82.
15. Baba Y., Tsuhako M., Sawa T., Yashima E., Akashi M. Temperature-programmed capillary affinity gel electrophoresis for the sensitive base-specific separation of oligodeoxynucleotides. J. Chromatogr. 632:1993;137-142.
16. Baba Y., Tsuhako M., Sawa T., Yashima E., Akashi M. Effect of urea concentration on the base-specific separation of oligonucleotides in capillary affinity gel electrophoresis. J. Chromatogr. A. 652:1993;93-99.
17. Baba Y., Inoue H., Tsuhako M., Sawa T., Kishida A., Yashima E., Akashi M. Evaluation of selective binding ability of oligodeoxynucleotide to nucleic acid analogues using capillary affinity gel electrophoresis. Anal. Sci. 10:1994;967-969.
18. Baba Y., Sawa T., Kishida A., Yashima E., Akashi M. Base-specific separation of oligodeoxynucleotides by capillary affinity gel electrophoresis. Electrophoresis. 19:1998;433-436.
19. Baba Y, Sawa T, Akashi M. Detection of mutation on DNA by capillary affinity gel electrophoresis, submitted for publication.
20. Guttman A., Cooke N.C. Capillary gel affinity electrophoresis of DNA fragments. Anal. Chem. 63:1991;2038-2042.
21. Rose D.J. Characterization of antisense binding properties of peptide nucleic acids by capillary gel electrophoresis. Anal. Chem. 65:1993;3545-3549.
22. Birnbaum S., Nilsson S. Protein-based capillary affinity gel electrophoresis for the separation of optical isomers. Anal. Chem. 64:1992;2872-2874.
23. Sun P., Barker G.E., Hartwick R.A., Grinberg N., Kaliszan R. Chiral separations using an immobilized protein-dextran polymer network in affinity capillary electrophoresis. J. Chromatogr. A. 652:1993;247-252.
24. Yashima E., Suehiro N., Miyauchi N., Akashi M. Affinity gel electrophoresis of nucleic acids I. J. Chromatogr. A. 654:1993;151-158.
25. Yashima E., Suehiro N., Miyauchi N., Akashi M. Affinity gel electrophoresis of nucleic acids II. J. Chromatogr. A. 654:1993;159-166.
26. Nilsson K., Lindell J., Norrlow O., Sellergren B. Imprinted polymers as antibody mimetics and new affinity gels for selective separations in capillary electrophoresis. J. Chromatogr. A. 680:1994;57-61.
27. Carisson C., Jonsson M., Norden B., Dulay M.T., Zare R.N., Noolandi J., Nielsen P.E., Tsui L.-C., Zielenski J. Mutation detection of oncogene by capillary electrophoresis. Nature. 380:1996;207.
28. Muscate A., Natt F., Paulus A., Ehrat M. Capillary affinity gel electrophoresis for combined size- and sequence-dependent separation of oligonucleotides. Anal. Chem. 70:1998;1419-1424.
29. Takeo K., Nakamura S. Dissociation constants of glucan phosphorylases of rabbit tissues studied by polyacrylamide gel disk electrophoresis. Arch. Biochem. Biophys. 153:1972;1-7.
30. Takeo K. Affinity gel electrophoresis. Adv. Electrophoresis. 1:1987;229-279.
31. Horejsi V., Ticha M. Qualitative and quantitative applications of affinity electrophoresis for the study of protein-ligand interactions: A review. J. Chromatogr. 376:1986;49-67.