Molecular and biological characterization of poliovirus 3 strains isolated in adriatic seawater samples

Water Research

Volumn 33, Issue 14, 1999, Pages 3204-3212

  Muscillo, Michele ^a   La Rosa, Giuseppina ^a   Carducci, Annalaura ^b   Cantiani, Laura ^b   Marianelli, Cinzia ^a  

^a ISTITUTO SUPERIORE DI SANITÀ   (Italy)

^b UNIVERSITY OF PISA   (Italy)

Author keywords

Adriatic sea; Mediterranean sea; Nucleotide sequence; Poliovirus 3; Pollution; Polymerase chain reaction; Viruses

Indexed keywords

ENZYMES; SEAWATER; VIRUSES;

POLIOVIRUS;

MARINE POLLUTION;

SEA WATER;

ARTICLE; MEDITERRANEAN SEA; NUCLEOTIDE SEQUENCE; POLIOMYELITIS VIRUS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TEMPERATURE SENSITIVITY; VIRUS DETECTION; WATER POLLUTION;

ENTEROVIRUS; HUMAN POLIOVIRUS 3; POLIOVIRUS; ROSA;

EID: 0032744840     PISSN: 00431354     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0043-1354(99)00028-7     Document Type: Article

References (39)

1. Abdel Kader O., Divizia M., el Ghazzawi E., Gamil F., Renganathan E., Pana A. Poliovirus detection in environmental samples by cell cultures and hybridization test. Ann. Ig. 6:1997;935-938.
2. Alexander L.M., Heaven A., Tennant A., Morris R. Symptomatology of children in contact with sea water contaminated with sewage. J. Epidemiol. Community Health. 46:1992;340-344.
3. Anonymous. Progress toward global eradication of poliomyelitis, 1996. MMWR. Morb. Mortal. Wkly. Rep. 46:1997;579-584.
4. Anonymous. Progress toward poliomyelitis eradication: Africa, 1996. MMWR. Morb. Mortal. Wkly. Rep. 46:1997;321-325.
5. Anonymous. Update: progress toward poliomyelitis eradication: Southeast Asia region, 1995-1997. MMWR. Morb. Mortal. Wkly. Rep. 46:1997;468-473.
6. Biellik R.J. Current status of polio eradication in southern Africa. J. Infect. Dis. 175:(Suppl 1):1997;S20-S23.
7. Cann A.J., Stanway G., Hughes P.J., Minor P.D., Evans D.M.A., Schild G.C., Almond J.W. Reversion to neurovirulence of the live-attenuated Sabin type 3 oral poliovirus vaccine. Nucleic Acids Res. 12:1984;7787-7792.
8. Carducci A., Arrighi S., Ruschi A. Detection of coliphages and enteroviruses in sewage and aerosol from an activated sludge wastewater treatment plant. Lett. Appl. Microbiol. 21:1995;207-209.
9. Cecuk D., Kruzic V., Turkovic B., Grce M. Human viruses in the coastal environment of a Croatian harbor. Rev. Epidemiol. Sante Publique. 41:1993;487-493.
10. Fleisher J.M., Kay D., Wyer M., Merrett H. The enterovirus test in the assessment of recreational water-associated gastroenteritis. Water Res. 30:1996;2341-2346.
11. Freier S.M., Kierzek R., Jaeger J.A., Sugimoto N., Caruthers M.H., Neilson T., Turner D.H. Improved free-energy parameters for predictions of RNA duplex stability. Proc. Natl. Acad. Sci. U.S.A. 83:1986;9373-9377.
12. Friedrich F. Genomic modifications in Sabin vaccine strains isolated from vaccination-associated cases, healthy contacts and healthy vaccinees. Acta Virol. 40:1996;157-170.
13. Friedrich F., Da S.E., Schatzmayr H.G. Type 2 poliovirus recombinants isolated from vaccine-associated cases and from healthy contacts in Brazil. Acta Virol. 40:1996;27-33.
14. Goyal S.M., Adams W.N., O'Malley M.L., Lear D.W. Human pathogenic viruses at sewage sludge disposal sites in the Middle Atlantic region. Appl. Environ. Microbiol. 48:1984;758-763.
15. Hughes M.S., Coyle P.V., Connolly J.H. Enteroviruses in recreational waters of Northern Ireland. Epidemiol. Infect. 108:1992;529-536.
16. Hughes P.J., Evans D.M., Minor P.D., Schild G.C., Almond J.W., Stanway G. The nucleotide sequence of a type 3 poliovirus isolated during a recent outbreak of poliomyelitis in Finland. J. Gen. Virol. 67:1986;2093-2102.
17. Huovilainen A., Kinnunen L., Poyry T., Laaksonen L., Roivainen M., Hovi T. Poliovirus type 3/Saukett: antigenic and structural correlates of sequence variation in the capsid proteins. Virology. 199:1994;228-232.
18. Lépine P.M.J. La poliomyelite. Lépine P. Techniques de Laboratoire en Virologie Humaine. 1964;463-515 Masson.
19. Macadam A.J., Ferguson G., Burlison J., Stone D., Skuce R., Almond J.W., Minor P.D. Correlation of RNA secondary structure and attenuation of Sabin vaccine strains of poliovirus in tissue culture. Virology. 189:1992;415-422.
20. Mastroeni I., Patti A.M., Fabrizi A., Santi A.L., Manduca A.M., Vescia N., Squarcione S., Fara G.M. Immunity status against poliomyelitis in persons 13-14 years-old living in Rome. Vaccine. 15:1997;747-750.
21. Metcalf T.G., Melnick J.L., Estes M.K. Environmental virology: from detection of virus in sewage and water by isolation to identification by molecular biology: a trip of over 50 years. Annu. Rev. Microbiol. 49:1995;461-487.
22. Muscillo M., Aulicino F.A., Patti A.M., Orsini P., Volterra L., Fara G.M. Molecular techniques for the identification of enteric viruses in marine waters. Water Res. 28:1994;1-7.
23. Muscillo M., Carducci A., La Rosa G., Cantiani L., Marianelli C. Enteric virus detection in adriatic seawater by cell culture, polymerase chain reaction and polyacrylamide gel electrophoresis. Water Res. 31:1997;1980-1984.
24. Muscillo M., Carducci A., La Rosa G., Cantiani L., Marianelli C. Enteric virus detection in adriatic seawater by cell culture, polymerase chain reaction and polyacrylamide gel electrophoresis. Water Res. 32:1998;. [published erratum appears in Water Res. 31, 1980-1984 (1997)].
25. Muscillo M., La Rosa G., Aulicino F.A., Orsini P., Bellucci C., Micarelli R. Comparison of cdna probe hybridizations and RT-PCR detection methods for the identification and differentiation of enteroviruses isolated from sea water samples. Water Res. 29:1995;1309-1316.
26. Muscillo M., La Rosa G., Carducci A., Cantiani L., Marianelli C. Molecular analysis of poliovirus 3 isolated from an aerosol generated by a waste water treatment plant. Water Res. 31:1997;3125-3131.
27. Muscillo M., La Rosa G., Carducci A., Cantiani L., Marianelli C. Molecular analysis of poliovirus 3 isolated from an aerosol generated by a waste water treatment plant. Water Res. 32:1998;2247. [published erratum appears in Water Res. 31, 1980-1984 (1997)].
28. Patti A.M., Aulicino F.A., Santi A.L., Muscillo M., Orsini P., Bellucci C., La Rosa G., Mastroeni I., Volterra L. Enteric virus pollution of Tyrrhenian areas. Water Air Soil Pollut. 88:1996;261-267.
29. Pilipenko E.V., Blinov V.M., Romanova L.I., Sinyakov A.N., Maslova S.V., Agol V.I. Conserved structural domains in the 5′-untranslated region of picornaviral genomes: an analysis of the segment controlling translation and neurovirulence. Virology. 168:1989;201-209.
30. Poyry T., Kinnunen L., Hovi T. Genetic variation in vivo and proposed functional domains of the 5′ noncoding region of poliovirus RNA. J. Virol. 66:1992;5313-5319.
31. Racaniello V.R., Meriam C. Poliovirus temperature-sensitive mutant containing a single nucleotide deletion in the 5′-noncoding region of the viral RNA. Virology. 155:1986;498-507.
32. Reynolds K.A., Gerba C.P., Pepper I.L. Detection of enteroviruses in marine waters by direct RT-PCR and cell culture. Water Sci. Technol. 31:1995;323-328.
33. Sambrook J., Fritsch E.F., Maniatis T. Molecular cloning: a Laboratory Manual. 2nd edn :1989;Cold Spring Harbor Laboratory Press.
34. Skinner M.A., Racaniello V.R., Dunn G., Cooper J., Minor P.D., Almond J.W. New model for the secondary structure of the 5′ noncoding RNA of poliovirus is supported by biochemical and genetic data that also show that RNA secondary structure is important in neurovirulence. J. Mol. Biol. 207:1989;379-392.
35. Stanway G., Cann A.J., Hauptmann R., Hughes P., Clarke L.D., Mountford R.C., Minor P.D., Schild G.C., Almond J.W. The nucleotide sequence of poliovirus type 3 leon 12a1b: comparison with poliovirus type 1. Nucleic Acids Res. 11:1983;5629-5643.
36. Stanway G., Hughes P.J., Mountford R.C., Reeve P., Minor P.D., Schild G.C., Almond J.W. Comparison of the complete nucleotide sequences of the genomes of the neurovirulent poliovirus P3/Leon/37 and its attenuated Sabin vaccine derivative P3/Leon 12a1b. Proc. Natl. Acad. Sci. U.S.A. 81:1984;1539-1543.
37. Tatem J.M., Weeks-Levy C., Mento S.J., DiMichele S.J., Georgiu A., Waterfield W.F., Sheip B., Costalas C., Davies T., Ritchey M.B. Oral poliovirus vaccine in the U.S.: molecular characterization of Sabin type 3 after replication in the gut of vaccinees. J. Med. Virol. 35:1991;101-109.
38. Toyoda H., Kohara M., Kataoka Y., Suganuma T., Omata T., Imura N., Nomoto A. Complete nucleotide sequences of all three poliovirus serotype genomes. Implication for genetic relationship, gene function and antigenic determinants. J. Mol. Biol. 174:1984;561-585.
39. Zucker M. Computer prediction of RNA structure. Methods Enzymol. 180:1989;262-288.