Equine synteny mapping of comparative anchor tagged sequences (CATS) from human Chromosome 5

Mammalian Genome

Volumn 10, Issue 11, 1999, Pages 1082-1084

  Caetano, Alexandre R ^a   Lyons, Leslie A ^b   Laughlin, Thomas F ^c   O'Brien, Stephen J ^b   Murray, James D ^a   Bowling, Ann T ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b NATIONAL CANCER INSTITUTE   (United States)

^c EAST TENNESSEE STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA N ACETYLHEXOSAMINIDASE; BIOCHEMICAL MARKER; COLONY STIMULATING FACTOR RECEPTOR; COMPLEMENT COMPONENT C9; INTERLEUKIN 7 RECEPTOR; OSTEONECTIN; PROTEIN KINASE; SERINE PROTEINASE;

ANIMAL GENETICS; ARTICLE; CHROMOSOME 5; CHROMOSOME MAP; CHROMOSOME MARKER; CHROMOSOME PAINTING; CHROMOSOME REARRANGEMENT; FLUORESCENCE IN SITU HYBRIDIZATION; GENE AMPLIFICATION; HORSE; HYBRID CELL; NONHUMAN; NUCLEOTIDE SEQUENCE; SYNTENY;

ANIMALS; CATTLE; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN, PAIR 5; DNA PRIMERS; GENETIC MARKERS; HORSES; HUMANS; MICE; POLYMERASE CHAIN REACTION; SEQUENCE TAGGED SITES;

ANIMALIA; EQUIDAE; EQUUS CABALLUS; FELIS CATUS;

EID: 0032740977     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359901165     Document Type: Article

References (16)

1. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402
2. Bailey E, Graves KT, Cothran EG, Reid R, Lear TL et al. (1995) Synteny-mapping horse microsatellite markers using a heterohybridoma panel. Anim Genet 26, 177-180
3. Breen M, Lindgren G, Binns MM, Norman J, Irvin Z et al. (1997) Genetical and physical assignments of equine microsatellites-first integration of anchored markers in horse genome mapping. Mamm Genome 8, 267-73
4. Caetano AR, Pomp D, Murray JD, Bowling AT (1999). Comparative mapping of 18 equine type I genes assigned by somatic cell hybrid analysis. Mamm Genome 10, 271-276
5. Chaudhary R, Raudsepp T, Guan XY, Zhang HG, Chowdhary BP (1998) Zoo-FISH with microdissected arm specific paints for HSA2, 5, 6, 16, and 19 refines known homology with pig and horse chromosomes. Mamm Genome 9, 44-49
6. Chevalet C, Corpet F (1986) Statistical decision rules concerning synteny or independence between markers. Cytogenet Cell Genet 43, 132-139
7. Chowdhary BP, Raudsepp T, Fronicke L, Scherthan H (1998) Emerging patterns of comparative genome organization in some mammalian species as revealed by Zoo-FISH. Genome Res 8, 577-589
8. Godard S, Vaiman D, Oustry A, Nocart M, Bertaud M et al. (1997) Characterization, genetic and physical mapping analysis of 36 horse plasmid and cosmid-derived microsatellites. Mamm Genome 8, 745-750
9. Godard S, Schibler L, Oustry A, Cribiu EP, Guerin G (1998) Construction of a horse BAC library and cytogenetical assignment of 20 type I and type II makers. Mamm Genome 9, 633-637
10. Lindgren G, Sandberg K, Persson H, Marklund S, Breen M et al. (1998) A primary male autosomal linkage map of the horse genome. Genome Res 8, 951-966
11. Lyons LA, Laughlin TF, Copeland NG, Jenkins NA, Womack JA et al. (1997) Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes. Nat Genet 5, 47-56
12. Nickerson DA, Taylor SL, Weiss KM, Clark AG, Hutchinson RG et al. (1998) DNA sequence diversity in a 9.7-kb region of the human lipoprotein lipase gene. Nat Genet 19, 233-240
13. O'Brien SJ, Womack JE, Lyons LA, Moore KJ, Jenkins NA et al. (1993) Anchored reference loci for comparative mapping in mammals. Nat Genet, 3, 103-112
14. Raudsepp T, Frönicke L, Scherthan H, Gustavsson I, Chowdhary BP (1996) Zoo-FISH delineates conserved chromosomal segments in horse and man. Chromosome Res 4, 218-225
15. Shiue Y-L, Bickel LA, Caetano AR, Millon LV, Clark RS et al. (1999) A synteny map of the horse genome comprised of 240 microsatellite and RAPD markers. Anim Genet 30, 1-9
16. Venta PJ, Brouillette JA, Yuzbasiyan-Gurkan V, Brewer GJ (1996) Genespecific universal mammalian sequence-tagged sites: application to the canine genome. Biochem Genet 34, 321-341