Characterization of the mouse Kid1 gene and identification of a highly related gene, Kid2

Gene

Volumn 240, Issue 1, 1999, Pages 13-22

  Tekki Kessaris, Nicoletta ^a   Bonventre, Joseph V ^b   Boulter, Catherine A ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b MASSACHUSETTS GENERAL HOSPITAL   (United States)

Author keywords

Kidney; KRAB; Transcription factor; Zinc finger

Indexed keywords

MESSENGER RNA; REPRESSOR PROTEIN; ZINC FINGER PROTEIN;

AMINO ACID SEQUENCE; ANIMAL TISSUE; ARTICLE; CELL DIFFERENTIATION; CHROMOSOME 11; CHROMOSOME MAP; DNA LIBRARY; EVOLUTION; GENE EXPRESSION; GENETIC ANALYSIS; KIDNEY DEVELOPMENT; KIDNEY TUBULE CELL; MOUSE; NONHUMAN; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; RAT; SOUTHERN BLOTTING; TISSUE REGENERATION; TRANSCRIPTION REGULATION;

AMINO ACID SEQUENCE; ANIMALS; CATS; CHROMOSOME MAPPING; CONSERVED SEQUENCE; DNA; DNA-BINDING PROTEINS; EMBRYO; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES; HAPLORHINI; HUMANS; MALE; MAMMALS; MICE; MICE, INBRED STRAINS; MOLECULAR SEQUENCE DATA; RATS; RNA, MESSENGER; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SHEEP; TISSUE DISTRIBUTION; TRANSCRIPTION FACTORS; ZINC FINGERS;

ANIMALIA; MAMMALIA; RODENTIA;

EID: 0032727693     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(99)00440-0     Document Type: Article

References (25)

1. Bellefroid E.J., Poncelet D.A., Lecocq P.J., Revelant O., Martial J.A. The evolutionary conserved Krüppel-associated box domain defines a subfamily of eukaryotic multifingered proteins. Proc. Natl. Acad. Sci. USA. 88:1991;3608-3612.
2. Bellefroid E.J., Marine J.C., Ried T., Lecocq P.J., Riviere M., Amamiya C., Poncelet D.A., Coulie P.G., de Jong P., Szpirer C., Ward D.C., Martial J.A. Clustered organisation of homologous KRAB zinc finger genes with enhanced expression in human T lymphoid cells. EMBO J. 12:1993;1363-1374.
3. Bonventre J.V., Witzgall R. KID1, a kidney transcription factor. Exp. Nephrol. 3:1995;159-164.
4. Brady J.P., Duncan M.K., Wawrousek E.F., Piatigorsky J. The transcription factor KID1 is highly expressed in both eye and kidney of the mouse. Exp. Eye Res. 64:1997;287-290.
5. Breen M. Towards high resolution maps of the mouse and human genomes - A facility for ordering markers to 0.1 cM resolution. Hum. Mol. Genet. 3:1994;621-627.
6. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162:1987;156-159.
7. Elser B., Kriz W., Bonventre J.V., Englert C., Witzgall R. The Krüppel-associated box KRAB)-zinc finger protein KID1 and the Wilms' tumour protein WT1, two transcriptional repressor proteins, bind to heteroduplex DNA. J. Biol. Chem. 272:1997;27908-27912.
8. Friedman J.R., Fredericks W.J., Jensen D.E., Speicher D.W., Huang X.P., Neilso E.G., Rauscher F.J. KAP-1, a novel corepressor for the highly conserved KRAB repression domain. Genes Dev. 10:1996;2067-2078.
9. Huang Z., Philippin B., O'Leary E., Bonventre J.V., Kriz W., Witzgall R. Expression of the transcriptional repressor protein KID1 leads to the disintegration of the nucleolus. J. Biol. Chem. 274:1999;7640-7648.
10. Jacob A.N., Manjunath N.A., Bra-Ward P., Kandpal R.P. Molecular cloning of a zinc finger gene eZNF from a human inner ear cDNA library, and in situ expression pattern of its mouse homologue in mouse inner ear. Somat. Cell Mol. Genet. 24:1998;121-129.
11. Kim S.S., Chen Y.M., O'Leary E., Witzgall R., Vidal M., Bonventre J.V. A novel member of the RING finger family, KRIP-1, associates with the KRAB-A transcriptional repressor domain of zinc finger proteins. Proc. Natl. Acad. Sci. USA. 93:1996;15299-15304.
12. Kozak M. Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs. Nucleic Acids Res. 25:1984;857-872.
13. Le Douarin B., Nielsen A.N., Garnier J.M., Ichinose H., Jeanmougin F., Losson R., Chambon P. A possible involvement of TIF1α and TIF1β in the epigenetic control of transcription by nuclear receptors. EMBO J. 15:1996;6701-6715.
14. Margolin J.F., Friedman J.R., Meyer W.K.H., Vissing H., Thiesen H.J., Rauscher F.J. Krüppel-associated boxes are potent transcriptional repression domains. Proc. Natl. Acad. Sci. USA. 91:1994;4509-4513.
15. Moosmann P., Georgiev O., Le Douarin B., Bourquin J.P., Schaffner W. Transcriptional repression by RING finger protein TIF1b that interacts with the KRAB repressor domain of KOX1. Nucleic Acids Res. 24:1996;4859-4867.
16. Omori Y., Kyushiki H., Takeda S., Suzuki M., Kawai A., Fujiwara T., Takahashi E., Nakamura Y. Cloning, expression and mapping of a novel human zinc-finger gene TCF17 homologous to rodent Kid1. Cytogenet. Cell Genet. 78:1997;285-288.
17. Pengue G., Calabro V., Cannada Bartoli P., Pagliuca A., Lania L. Repression of transcriptional activity at a distance by the evolutionary conserved KRAB domain present in a subfamily of zinc finger proteins. Nucleic Acids Res. 22:1994;2908-2914.
18. Pengue G., Lania L. KRUPPEL-associated box-mediated repression of RNA polymerase II promoters is influenced by the arrangement of basal promoter elements. Proc. Natl. Acad. Sci. USA. 93:1996;1015-1020.
19. Rhodes M., et al. A high resolution map of the mouse genome. Genome Res. 8:1998;531-542.
20. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press. 1989;Cold Spring Harbor, New York.
21. Shannon M., Ashworth L.K., Mucenski M.L., Lamerdin J.E., Branscomb E., Stubbs L. Comparative analysis of a conserved zinc finger gene cluster on human chromosome 19q and mouse chromosome 7. Genomics. 33:1996;112-120.
22. Shannon M., Stubbs L. Analysis of homologous XRCC1-linked zinc finger gene families in human and mouse: evidence for orthologous genes. Genomics. 49:1998;112-121.
23. Witzgall R., O'Leary E., Gessner R., Ouellette A.J., Bonventre J.V. KID1 a putative renal transcription factor: regulation during ontogeny and in response to ischemia and toxic injury. Mol. Cell. Biol. 13:1993;1933-1942.
24. Witzgall R., Volk R., Yeung R.S., Bonventre J.V. Genomic structure and chromosomal location of the rat gene encoding the zinc finger transcription factor KID1. Genomics. 20:1994;203-209.
25. Witzgall R., Obermuller N., Bolitz U., Calvet J.P., Cowley B.D. Jr., Walker C., Kriz W., Gretz N., Bonventre J.V. KID1 expression is high in differentiated renal proximal tubule cells and suppressed in cyst epithelia. Am. J. Physiol. 275:1998;F928-F937.