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Volumn 56, Issue 9-10, 1999, Pages 729-734

Short sequence repeats in microbial pathogenesis and evolution

Author keywords

Candida albicans; Haemophilus influenzae; Helicobacter pylori; Microbial evolution; Molecular epidemiology; Short sequence repeats; Slipped strand mispairing; Variable number of tandem repeat loci

Indexed keywords

BACTERIAL DNA; REPETITIVE DNA;

EID: 0032723767     PISSN: 1420682X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s000180050019     Document Type: Conference Paper
Times cited : (65)

References (37)
  • 1
    • 0030060689 scopus 로고    scopus 로고
    • Sequence based identification of microbial pathogens: A reconsideration of Koch's postulates
    • Fredricks D. N. and Relman D. A. (1996) Sequence based identification of microbial pathogens: A reconsideration of Koch's postulates. Clin. Microbiol. Rev. 9: 18-33
    • (1996) Clin. Microbiol. Rev. , vol.9 , pp. 18-33
    • Fredricks, D.N.1    Relman, D.A.2
  • 2
    • 0030891113 scopus 로고    scopus 로고
    • Not all Helicobacter pylori strains are created equal: Should all be eliminated?
    • Blaser M. J. (1997) Not all Helicobacter pylori strains are created equal: Should all be eliminated? Lancet 349: 1020-1022
    • (1997) Lancet , vol.349 , pp. 1020-1022
    • Blaser, M.J.1
  • 4
    • 0025816587 scopus 로고
    • Interspecies recombinational events during the evolution of altered PBP2X genes in penicillin-resistant clinical isolates of Streptococcus pneumoniae
    • Laible G., Spratt B. G. and Hakenbeck R. (1991) Interspecies recombinational events during the evolution of altered PBP2X genes in penicillin-resistant clinical isolates of Streptococcus pneumoniae. Mol. Microbiol. 5: 1993-2002
    • (1991) Mol. Microbiol. , vol.5 , pp. 1993-2002
    • Laible, G.1    Spratt, B.G.2    Hakenbeck, R.3
  • 5
    • 0001990821 scopus 로고    scopus 로고
    • Distinguishing bacterial and fungal pathogens by repetitive-sequence based PCR (rep PCR)
    • Versalovic J. and Lupski J. R. (1996) Distinguishing bacterial and fungal pathogens by repetitive-sequence based PCR (rep PCR). Lab. Med. Int. 13: 7-8
    • (1996) Lab. Med. Int. , vol.13 , pp. 7-8
    • Versalovic, J.1    Lupski, J.R.2
  • 6
    • 0031931617 scopus 로고    scopus 로고
    • DNA fingerprinting of Listeria monocytogenes using enterobacterial repetitive intergenic consensus (ERIC) motifs polymerase chain reaction/capillary electrophoresis
    • Sciacchitano C. J. (1998) DNA fingerprinting of Listeria monocytogenes using enterobacterial repetitive intergenic consensus (ERIC) motifs polymerase chain reaction/capillary electrophoresis. Electrophoresis 19: 66-70
    • (1998) Electrophoresis , vol.19 , pp. 66-70
    • Sciacchitano, C.J.1
  • 7
    • 0026689286 scopus 로고
    • A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumoniae
    • Martin B., Humbert O., Camara M., Guenzi E., Walker J., Mitchell T. et al. (1992) A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumoniae. Nucleic Acids Res. 20: 3473-3483
    • (1992) Nucleic Acids Res. , vol.20 , pp. 3473-3483
    • Martin, B.1    Humbert, O.2    Camara, M.3    Guenzi, E.4    Walker, J.5    Mitchell, T.6
  • 8
    • 0031746448 scopus 로고    scopus 로고
    • Genotypic characterization of Bradyrhizobium strains nodulating endemic woody legumes of the Canary islands by PCR restriction fragment polymorphism analysis of genes encoding 16S rRNA (16S rDNA) and 16S-23S rDNA intergenic spacers, repetitive extragenic palindrome PCR genomic fingerprinting and partial 16S rDNA sequencing
    • Vinuesa P., Rademaker J. L. W., De Bruin F. J. and Werner D. (1998) Genotypic characterization of Bradyrhizobium strains nodulating endemic woody legumes of the Canary islands by PCR restriction fragment polymorphism analysis of genes encoding 16S rRNA (16S rDNA) and 16S-23S rDNA intergenic spacers, repetitive extragenic palindrome PCR genomic fingerprinting and partial 16S rDNA sequencing. Appl. Eviron. Microbiol. 64: 2096-2104
    • (1998) Appl. Eviron. Microbiol. , vol.64 , pp. 2096-2104
    • Vinuesa, P.1    Rademaker, J.L.W.2    De Bruin, F.J.3    Werner, D.4
  • 9
    • 0031903423 scopus 로고    scopus 로고
    • Molecular characterisation of pneumococcal nasopharynx isolates collected from children during their first two years of life
    • Sluijter M., Faden H., Groot R. de, Lemmens N., Goessens W. H. F., Belkum A. van et al. (1998) Molecular characterisation of pneumococcal nasopharynx isolates collected from children during their first two years of life. J. Clin. Microbiol. 36: 2248-2253
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 2248-2253
    • Sluijter, M.1    Faden, H.2    De Groot, R.3    Lemmens, N.4    Goessens, W.H.F.5    Van Belkum, A.6
  • 10
    • 0027408486 scopus 로고
    • Comparison of phage typing and DNA fingerprinting by PCR for discrimination of methicillin resistant Staphylococcus aureus strains
    • Belkum A. van, Bax R., Peerbooms P., Goessens W. H. F., Leeuwen N. van and Quint W. G. V. (1993) Comparison of phage typing and DNA fingerprinting by PCR for discrimination of methicillin resistant Staphylococcus aureus strains. J. Clin. Microbiol. 31: 798-803
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 798-803
    • Van Belkum, A.1    Bax, R.2    Peerbooms, P.3    Goessens, W.H.F.4    Van Leeuwen, N.5    Quint, W.G.V.6
  • 11
    • 0029013782 scopus 로고
    • The genetic basis of colony opacity in Streptococcus pneumoniae: Evidence for the effect of BOX elements on the frequency of phenotypic variation
    • Saluja S. K. and Weiser J. N. (1995) The genetic basis of colony opacity in Streptococcus pneumoniae: Evidence for the effect of BOX elements on the frequency of phenotypic variation. Mol. Microbiol. 16: 215-227
    • (1995) Mol. Microbiol. , vol.16 , pp. 215-227
    • Saluja, S.K.1    Weiser, J.N.2
  • 12
    • 0343907268 scopus 로고    scopus 로고
    • A mutation in the D,D-carboxypeptidase penicillin binding protein-3 of Streptococcus pneumoniae contributes to cefotaxime resistance of the laboratory mutant C604
    • Krauss J. and Hakenbeck R. (1997) A mutation in the D,D-carboxypeptidase penicillin binding protein-3 of Streptococcus pneumoniae contributes to cefotaxime resistance of the laboratory mutant C604. Antimicrob. Agents Chemother. 41: 936-942
    • (1997) Antimicrob. Agents Chemother. , vol.41 , pp. 936-942
    • Krauss, J.1    Hakenbeck, R.2
  • 14
    • 0027306173 scopus 로고
    • Destabilisation of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair
    • Strand S., Prolla T. A., Liskay R. M. and Petes T. D. (1993) Destabilisation of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair. Nature 365: 274-276
    • (1993) Nature , vol.365 , pp. 274-276
    • Strand, S.1    Prolla, T.A.2    Liskay, R.M.3    Petes, T.D.4
  • 16
    • 0033524413 scopus 로고    scopus 로고
    • Polyglutamine-mediated dysfunction and apoptotic death of a Caenorhabditis elegans sensory neuron
    • Faber P. W., Alter J. R., MacDonald M. E. and Hart A. C. (1999) Polyglutamine-mediated dysfunction and apoptotic death of a Caenorhabditis elegans sensory neuron. Proc. Natl. Acad. Sci. USA 96: 179-184
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 179-184
    • Faber, P.W.1    Alter, J.R.2    MacDonald, M.E.3    Hart, A.C.4
  • 17
    • 0024465134 scopus 로고
    • The molecular mechanism of phase variation of H. influenzae lipopolysaccharide
    • Weiser J. N., Love J. M. and Moxon E. R. (1989) The molecular mechanism of phase variation of H. influenzae lipopolysaccharide. Cell 59: 657-665
    • (1989) Cell , vol.59 , pp. 657-665
    • Weiser, J.N.1    Love, J.M.2    Moxon, E.R.3
  • 18
    • 0027256770 scopus 로고
    • Phase variation of H. influenzae fimbriae: Transcriptional control of two divergent genes through a variable combined promoter region
    • Van Ham M., Van Alphen L., Mooi F. R. and Van Putten J. P. M. (1993) Phase variation of H. influenzae fimbriae: Transcriptional control of two divergent genes through a variable combined promoter region. Cell 73: 1187-1196
    • (1993) Cell , vol.73 , pp. 1187-1196
    • Van Ham, M.1    Van Alphen, L.2    Mooi, F.R.3    Van Putten, J.P.M.4
  • 19
    • 0027938589 scopus 로고
    • Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs
    • Foster P. L. and Trimarchi. J. M. (1994) Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs. Science 265: 407-409
    • (1994) Science , vol.265 , pp. 407-409
    • Foster, P.L.1    Trimarchi, J.M.2
  • 20
    • 0029041235 scopus 로고
    • Variable expression of class 1 outer membrane protein in Neisseria meningitidis is caused by variation in the spacing between the - 10 and - 35 regions of the promoter
    • Van der Ende A., Hopman A., Zaat S., Essink B. B., Berkhout B. and Dankert J. (1995) Variable expression of class 1 outer membrane protein in Neisseria meningitidis is caused by variation in the spacing between the - 10 and - 35 regions of the promoter. J. Bacteriol. 177: 2475-2480
    • (1995) J. Bacteriol. , vol.177 , pp. 2475-2480
    • Van der Ende, A.1    Hopman, A.2    Zaat, S.3    Essink, B.B.4    Berkhout, B.5    Dankert, J.6
  • 23
    • 0032443222 scopus 로고    scopus 로고
    • Antigenic diversity and gene polymorphisms in Haemophilus influenzae
    • Gilsdorf J. R. (1998) Antigenic diversity and gene polymorphisms in Haemophilus influenzae. Infect. Immun. 66: 5053-5059
    • (1998) Infect. Immun. , vol.66 , pp. 5053-5059
    • Gilsdorf, J.R.1
  • 25
    • 0031931361 scopus 로고    scopus 로고
    • Simple sequence repeats in the Helicobacter pylori genome
    • Saunders N. J., Peden J. F., Hood D. W. and Moxon E. R. (1998) Simple sequence repeats in the Helicobacter pylori genome. Mol. Microbiol. 27: 1091-1098
    • (1998) Mol. Microbiol. , vol.27 , pp. 1091-1098
    • Saunders, N.J.1    Peden, J.F.2    Hood, D.W.3    Moxon, E.R.4
  • 26
    • 0033552961 scopus 로고    scopus 로고
    • Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
    • Alm R. A., Ling L. S. L., Moir D. T., King B. L., Brown E. D., Doig P. C. et al. (1999) Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Nature 397: 176-180
    • (1999) Nature , vol.397 , pp. 176-180
    • Alm, R.A.1    Ling, L.S.L.2    Moir, D.T.3    King, B.L.4    Brown, E.D.5    Doig, P.C.6
  • 28
    • 0030044409 scopus 로고    scopus 로고
    • Long polymorphic microsatellites in simple organisms
    • Field D. and Wills C. (1996) Long polymorphic microsatellites in simple organisms. Proc. R. Soc. Lond. B 263: 209-215
    • (1996) Proc. R. Soc. Lond. B , vol.263 , pp. 209-215
    • Field, D.1    Wills, C.2
  • 29
    • 0031855733 scopus 로고    scopus 로고
    • Lack of consistent short sequence repeat polymorphisms in genetically homologous colonising and invasive Candida albicans strains
    • Verduyn Lunel F., Licciardello L., Stefani S., Verbrugh H. A., Melchers W. J. G., Meis J. F. G. M. et al. (1998) Lack of consistent short sequence repeat polymorphisms in genetically homologous colonising and invasive Candida albicans strains. J. Bacteriol. 180: 3771-3778
    • (1998) J. Bacteriol. , vol.180 , pp. 3771-3778
    • Verduyn Lunel, F.1    Licciardello, L.2    Stefani, S.3    Verbrugh, H.A.4    Melchers, W.J.G.5    Meis, J.F.G.M.6
  • 30
    • 0032539711 scopus 로고    scopus 로고
    • Abundant microsatellite polymorphism in Saccharomyces cerevisiae, and the different distributions of microsatellites in eight prokaryotes and S. cerevisiae, result from mutation pressures and a variety of selective forces
    • Field D. and Wills. C. (1998) Abundant microsatellite polymorphism in Saccharomyces cerevisiae, and the different distributions of microsatellites in eight prokaryotes and S. cerevisiae, result from mutation pressures and a variety of selective forces. Proc. Natl. Acad. Sei. USA 95: 1647-1652
    • (1998) Proc. Natl. Acad. Sei. USA , vol.95 , pp. 1647-1652
    • Field, D.1    Wills, C.2
  • 31
    • 0023649836 scopus 로고
    • High frequency of short frameshifts in poly-CA/GT tandem repeats borne by bacteriophage M13 in Escherichia coli K-12
    • Levinson G. and Gutman. G. A. (1987) High frequency of short frameshifts in poly-CA/GT tandem repeats borne by bacteriophage M13 in Escherichia coli K-12. Nucleic Acids Res. 15: 5323-5338
    • (1987) Nucleic Acids Res. , vol.15 , pp. 5323-5338
    • Levinson, G.1    Gutman, G.A.2
  • 32
  • 34
    • 0030922326 scopus 로고    scopus 로고
    • Outbreak of amoxicillin resistant Haemophilus influenzae: Variable number of tandem repeats as novel molecular markers
    • Belkum A. van, Melchers W., Ijsseldijk C., Nohlmans L., Verbrugh H and Meis J. F. G. M. (1997) Outbreak of amoxicillin resistant Haemophilus influenzae: Variable number of tandem repeats as novel molecular markers. J. Clin. Microbiol. 35: 1517-1520
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 1517-1520
    • Van Belkum, A.1    Melchers, W.2    Ijsseldijk, C.3    Nohlmans, L.4    Verbrugh, H.5    Meis, J.F.G.M.6
  • 35
    • 0031003862 scopus 로고    scopus 로고
    • Characterisation of the variable-number tandem repeats in vrrA from different Bacillus anthracis isolates
    • Jackson P. J., Walthers E. A., Kalif A. S., Richmond K. L., Adair D. M., Hill K. K. et al. (1997) Characterisation of the variable-number tandem repeats in vrrA from different Bacillus anthracis isolates. Appl. Environ. Microbiol. 63: 1400-1405
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 1400-1405
    • Jackson, P.J.1    Walthers, E.A.2    Kalif, A.S.3    Richmond, K.L.4    Adair, D.M.5    Hill, K.K.6
  • 36
    • 0031771559 scopus 로고    scopus 로고
    • Expression of the pMGA genes of Mycoplasma gallisepticum is controlled by variation in the GAA trinucleotide repeat lengths within the 5′ noncoding regions
    • Glew M. D., Baseggio N., Markham P. F., Browning G. F. and Walker. I. D. (1998) Expression of the pMGA genes of Mycoplasma gallisepticum is controlled by variation in the GAA trinucleotide repeat lengths within the 5′ noncoding regions. Infect. Immun. 66: 5833-5841
    • (1998) Infect. Immun. , vol.66 , pp. 5833-5841
    • Glew, M.D.1    Baseggio, N.2    Markham, P.F.3    Browning, G.F.4    Walker, I.D.5
  • 37
    • 0025202373 scopus 로고
    • Comparative analysis of human cytomegalovirus a sequence in multiple clinical isolates by using polymerase chain reaction and restriction fragment length polymorphism assays
    • Zaia J. A., Gallez-Hawkins G., Churchill M. A., Morton-Blackshire A., Pande H., Adler S. P. et al. (1990) Comparative analysis of human cytomegalovirus a sequence in multiple clinical isolates by using polymerase chain reaction and restriction fragment length polymorphism assays. J. Clin. Micobiol. 28: 2602-2607
    • (1990) J. Clin. Micobiol. , vol.28 , pp. 2602-2607
    • Zaia, J.A.1    Gallez-Hawkins, G.2    Churchill, M.A.3    Morton-Blackshire, A.4    Pande, H.5    Adler, S.P.6


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