Phylogeographic patterns exhibited by Ontario rabies virus variants

Epidemiology and Infection

Volumn 123, Issue 2, 1999, Pages 325-336

  Nadin Davis, S A ^a   Sampath, M I ^a   Casey, G A ^a   Tinline, R R ^b   Wandeler, A I ^a  

^a Ottawa Laboratory Fallowfield   (Canada)

^b QUEEN S UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOPROTEIN;

ANIMAL BEHAVIOR; ARTICLE; CANADA; CARBOXY TERMINAL SEQUENCE; FOX; GEOGRAPHIC DISTRIBUTION; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; PHYLOGENY; PROTEIN DOMAIN; RABIES VIRUS; TOPOGRAPHY; VIRUS GENE; VIRUS TRANSMISSION;

AMINO ACID SEQUENCE; ANIMALS; DNA, VIRAL; EPIDEMIOLOGY, MOLECULAR; FOXES; INCIDENCE; MEPHITIDAE; MOLECULAR SEQUENCE DATA; ONTARIO; PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RABIES; RABIES VIRUS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

EID: 0032708869     PISSN: 09502688     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0950268899002885     Document Type: Article

References (37)

1. Tordo N, Poch O, Ermine A, Keith G, Rougeon F. Walking along the rabies genome: Is the large G-L intergenic region a remnant gene? Proc Natl Acad Sci USA 1986; 83: 3914-8.
2. Tordo N, Poch O, Ermine A, Keith G, Rougeon, F. Completion of the rabies virus genome sequence determination: highly conserved domains among the L (polymerase) proteins of unsegmented negative-strand RNA viruses. Virology 1988; 165: 565-76.
3. Conzelmann K, Cox JH, Schneider LG, Thiel H. Molecular cloning and complete nucleotide sequence of the attenuated rabies virus SAD B19. Virology 1990; 175: 485-99.
4. Tordo N. Characteristics and molecular biology of the rabies virus. In: Meslin F-X, Kaplan MM, Koprowski H, eds. Laboratory techniques in rabies, 4th ed. Geneva: WHO, 1996: 28-51.
5. Smith JS. Rabies virus epitopic variation: use in ecologic studies. Adv Virus Res 1989; 36: 215-53.
6. Rupprecht CE, Dietzschold B, Wunner WH, Koprowski H. Antigenic relationships of lyssaviruses. In: Baer GM, ed. The natural history of rabies. Boca Raton: CRC Press, 1991: 69-100.
7. Saiki RK, Gelfand DH, Stoffel S, et al. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 1988; 239: 487-91.
8. Sacramento D, Badrane H, Bourhy H, Tordo N. Molecular epidemiology of rabies virus in France: comparison with vaccine strains. J Gen Virol 1992; 73: 1149-58.
9. Bourhy H, Kissi B, Tordo N. Molecular diversity of the lyssavirus genus. Virology 1993; 194: 70-81.
10. von Teichman BF, Thomson GR, Meredith CD, Nel LH. Molecular epidemiology of rabies virus in South Africa: evidence for two distinct virus groups. J Gen Virol 1995; 76: 73-82.
11. Smith JS, Orciari LA, Yagar PA. Molecular epidemiology of rabies in the United States. Sem Virol 1995; 6: 387-400.
12. Kissi B, Tordo N, Bourhy H. Genetic polymorphism in the rabies virus nucleoprotein gene. Virology 1995; 209: 526-37.
13. Smith JS, Orciari LA, Yagar PA, Seidel HD, Warner CK. Epidemiologic and historical relationships among 87 rabies virus isolates as determined by limited sequence analysis. J Infect Dis 1992; 166: 296-307.
14. Tabel H, Corner AH, Webster WA, Casey GA. History and epizootiology of rabies in Canada. Can Vet J 1974; 15: 271-81.
15. Rosatte RC. Rabies in Canada: history, epidemiology and control. Can Vet J 1988; 29: 362-5.
16. Webster WA, Casey GA, Charlton KM, Wiktor TJ. Antigenic variants of rabies virus in isolates from Eastern, Central and Northern Canada. Can J Comp Med 1985; 49: 186-8.
17. Nadin-Davis SA, Casey GA, Wandeler A. Identification of regional variants of the rabies virus within the Canadian province of Ontario. J Gen Virol 1993; 74: 829-37.
18. Nadin-Davis SA, Casey GA, Wandeler AI. A molecular epidemiological study of rabies in Central Ontario and Western Quebec. J Gen Virol 1994; 75: 2575-83.
19. Steck F, Wandeler A. The epidemiology of fox rabies in Europe. Epidem Rev 1980; 2: 71-96.
20. Tinline RR. Persistence of rabies in wildlife. In: Campbell JB, Charlton KM, eds. Rabies. Boston: Kluwer Academic Publishers, 1988: 301-22.
21. Wandeler AI, Nadin-Davis SA, Tinline RR, Rupprecht CE. Rabies epidemiology: some ecological and evolutionary perspectives. In: Rupprecht CE, Dietzschold B, Koprowski H, eds. Lyssaviruses. Berlin: Springer-Verlag, 1994: 297-324.
22. Ravkov EG, Smith JS, Nichol ST. Rabies virus glycoprotein gene contains a long 3′ noncoding region which lacks pseudogene properties. Virology 1995; 206: 718-23.
23. Tordo N, Badrane H, Bourhy H, Sacramento D. Molecular epidemiology of Lyssaviruses: focus on the glycoprotein and pseudogenes. Onderstepoort J Vet Res 1993; 60: 315-23.
24. Webster WA, Casey GA. Diagnosis of rabies infection. In: Campbell JB, Charlton KM, eds. Rabies. Boston: Kluwer Academic Publishers, 1988: 201-22.
25. Tinline RR, Gregory D. The Universal Transverse Mercator Code: a location code for disease reporting. Can Vet J 1988; 29: 825-9.
26. Kamolvarin N, Tirawatnpong T, Rattanasiwamoke R, Tirawatnpong S, Panpanich T, Hemachudha T. Diagnosis of rabies by polymerase chain reaction with nested primers. J Infect Dis 1993; 167: 207-10.
27. Sambrook J, Fritsch EF, Maniatis T, eds. Molecular cloning: a laboratory manual, 2nd edn. New York: Cold Spring Harbor Laboratory, 1989.
28. Henikoff S. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 1984; 28: 351-9.
29. Higgins DG, Sharp PM. CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene 1988; 73: 237-44.
30. Felsenstein J. Confidence limits on phytogenies: an approach using the bootstrap. Evolution 1985; 39: 783-91.
31. Page RD. TREEVIEW: An application to display phylogenetic trees on personal computers. Comp Appl Biosci 1996; 12: 357-8.
32. Burroughs P, McDonnell R. Principles of geographical information systems. Oxford: Oxford University Press, 1998: 114-5.
33. Tuffereau C, Leblois H, Benejean J, Coulon P, Lafay F, Flamand A. Arginine or lysine in position 333 of ERA and CVS glycoprotein is necessary for rabies virulence in adult mice. Virology 1989; 172: 206-12.
34. Nadin-Davis SA, Huang W, Wandeler Al. The design of strain-specific polymerase chain reactions for discrimination of the raccoon rabies virus strain from indigenous rabies viruses of Ontario. J Virol Methods 1996; 57: 1-14.
35. Benmansour A, Brahimi M, Tuffereau C, Coulon P, Lafay F, Flamand A. Rapid sequence evolution of street rabies glycoprotein is related to the highly heterogeneous nature of the viral population. Virology 1992; 187: 33-45.
36. Voigt DR, Tinline R. Fox rabies and trapping. A study of disease harvest interaction. In: Sanderson G, ed. Proceedings of the Midwest Fish and Wildlife Conference. Kansas, 1982: 139-56.
37. Mebatsion T, Konig M, Conzelmann K-K. Budding of rabies virus particles in the absence of the spike glycoprotein. Cell 1996; 84: 941-51.