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Volumn 145, Issue 11, 1999, Pages 3081-3088

The hydrophobic heptad repeat in Region III of Escherichia coli transcription factor sigma 54 is essential for core RNA polymerase binding

Author keywords

Core binding activity; Enhancer dependent transcription; Hydrophobic heptad repeat; Sigma 54; Site specific mutagenesis

Indexed keywords

ISOLEUCINE; LEUCINE; RNA POLYMERASE; SIGMA FACTOR; TRANSCRIPTION FACTOR;

EID: 0032694228     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-145-11-3081     Document Type: Article
Times cited : (3)

References (32)
  • 1
    • 0026581288 scopus 로고
    • The prokaryotic enhancer binding protein NTRC has ATPase activity which is phosphorylation and DNA dependent
    • Austin, S. & Dixon, R. A. (1992). The prokaryotic enhancer binding protein NTRC has ATPase activity which is phosphorylation and DNA dependent. EMBO J 11, 2219-2228.
    • (1992) EMBO J , vol.11 , pp. 2219-2228
    • Austin, S.1    Dixon, R.A.2
  • 2
    • 0028264349 scopus 로고
    • Purification and in vitro activities of the native nitrogen fixation control proteins NifA and Nifl
    • Austin, S., Buck, M., Cannon, W., Eydmann, T. & Dixon, R. (1994). Purification and in vitro activities of the native nitrogen fixation control proteins NifA and NifL. J Bacteriol 176, 3460-3465.
    • (1994) J Bacteriol , vol.176 , pp. 3460-3465
    • Austin, S.1    Buck, M.2    Cannon, W.3    Eydmann, T.4    Dixon, R.5
  • 3
    • 0024451301 scopus 로고
    • Characterization of a cis-regulatory element necessary for formamate induction of the formate dehydrogenase gene (fdhF) of Escherichia coli
    • Birkmann, A. & Bock, A. (1989). Characterization of a cis-regulatory element necessary for formamate induction of the formate dehydrogenase gene (fdhF) of Escherichia coli. Mol Microbiol 3, 187-195.
    • (1989) Mol Microbiol , vol.3 , pp. 187-195
    • Birkmann, A.1    Bock, A.2
  • 4
    • 0026729012 scopus 로고
    • Specific binding of the transcription factor sigma-54 to promoter DNA
    • Buck, M. & Cannon, W. (1992). Specific binding of the transcription factor sigma-54 to promoter DNA. Nature 358, 422-424.
    • (1992) Nature , vol.358 , pp. 422-424
    • Buck, M.1    Cannon, W.2
  • 9
    • 0000776061 scopus 로고
    • Bacterial sigma factors
    • Edited by S. L. McKnight & K. R. Yamamoto. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
    • Gross, C. A., Lonetto, M. & Losick, R. (1992). Bacterial sigma factors. In Transcriptional Regulation, pp. 129-195. Edited by S. L. McKnight & K. R. Yamamoto. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
    • (1992) Transcriptional Regulation , pp. 129-195
    • Gross, C.A.1    Lonetto, M.2    Losick, R.3
  • 10
    • 0031046662 scopus 로고    scopus 로고
    • DNA-binding determinants of sigma 54 as deduced from libraries of mutations
    • Guo, Y. & Gralla, J. D. (1997). DNA-binding determinants of sigma 54 as deduced from libraries of mutations. J Bacteriol 179, 1239-1245.
    • (1997) J Bacteriol , vol.179 , pp. 1239-1245
    • Guo, Y.1    Gralla, J.D.2
  • 11
    • 0028225642 scopus 로고
    • Analysis of the N-terminal leucine heptad and hexad repeats of sigma 54
    • Hsieh, M. & Gralla, J. D. (1994). Analysis of the N-terminal leucine heptad and hexad repeats of sigma 54. J Mol Biol 239, 15-24.
    • (1994) J Mol Biol , vol.239 , pp. 15-24
    • Hsieh, M.1    Gralla, J.D.2
  • 12
    • 0028085082 scopus 로고
    • Functional roles for the glutamines within the glutamine-rich region of the transcription factor sigma 54
    • Hsieh, M., Tintut, Y. & Gralla, J. D. (1994). Functional roles for the glutamines within the glutamine-rich region of the transcription factor sigma 54. J Biol Chem 269, 373-378.
    • (1994) J Biol Chem , vol.269 , pp. 373-378
    • Hsieh, M.1    Tintut, Y.2    Gralla, J.D.3
  • 13
    • 0026592145 scopus 로고
    • 54 is involved in recognition of the -13 promoter region
    • 54 is involved in recognition of the -13 promoter region. J Bacteriol 174, 7221-7226.
    • (1992) J Bacteriol , vol.174 , pp. 7221-7226
    • Merrick, M.1    Chambers, S.2
  • 14
    • 0023496357 scopus 로고
    • The nucleotide sequence of the sigma factor gene ntrA (rpoN) of azotobacter vinelandii: Analysis of conserved sequences in NtrA proteins
    • Merrick, M. J., Gibbons, J. & Toukdarian, A. (1987). The nucleotide sequence of the sigma factor gene ntrA (rpoN) of Azotobacter vinelandii: analysis of conserved sequences in NtrA proteins. Mol Gen Genet 210, 323-330.
    • (1987) Mol Gen Genet , vol.210 , pp. 323-330
    • Merrick, M.J.1    Gibbons, J.2    Toukdarian, A.3
  • 15
    • 0028301602 scopus 로고
    • DNA distortion and nucleation of local DNA unwinding within sigma 54 holoenzyme closed promoter complexes
    • Morris, L., Cannon, W., Claverie-Martin, F., Austin, S. & Buck, M. (1994). DNA distortion and nucleation of local DNA unwinding within sigma 54 holoenzyme closed promoter complexes. J Biol Chem 269, 11563-11571.
    • (1994) J Biol Chem , vol.269 , pp. 11563-11571
    • Morris, L.1    Cannon, W.2    Claverie-Martin, F.3    Austin, S.4    Buck, M.5
  • 16
    • 0024598928 scopus 로고
    • Function of a bacterial activator protein that binds to transcriptional enhancers
    • Popham, D. L., Szeto, D., Keener, J. & Kustu, S. (1989). Function of a bacterial activator protein that binds to transcriptional enhancers. Science 243, 629-635.
    • (1989) Science , vol.243 , pp. 629-635
    • Popham, D.L.1    Szeto, D.2    Keener, J.3    Kustu, S.4
  • 17
    • 0022446209 scopus 로고
    • Transcription of glnA in E. Coli is stimulated by activator bound to sites far from the promoter
    • Reitzer, L. J. & Magasanik, B. (1986). Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter. Cell 45, 785-792.
    • (1986) Cell , vol.45 , pp. 785-792
    • Reitzer, L.J.1    Magasanik, B.2
  • 18
    • 0348026706 scopus 로고
    • Probing the Escherichia coli glnALG upstream activation mechanism in vivo
    • Sasse-Dwight, S. & Gralla, J. D. (1988). Probing the Escherichia coli glnALG upstream activation mechanism in vivo. Proc Natl Acad Sci USA 85, 8934-8938.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 8934-8938
    • Sasse-Dwight, S.1    Gralla, J.D.2
  • 19
    • 0025180626 scopus 로고
    • Role of eukaryotic-type functional domains found in the prokaryotic enhancer receptor factor sigma 54
    • Sasse-Dwight, S. & Gralla, J. D. (1990). Role of eukaryotic-type functional domains found in the prokaryotic enhancer receptor factor sigma 54. Cell 62, 945-954.
    • (1990) Cell , vol.62 , pp. 945-954
    • Sasse-Dwight, S.1    Gralla, J.D.2
  • 20
    • 0015239538 scopus 로고
    • Genetics and metabolic control of enzymes responsible for histidine degradation in Salmonella typhimurium. 4-imidazolone-5-propionate amidohydrolase and N-formimino-L-glutamate formiminohydrolase
    • Smith, G. R., Halpern, Y. S. & Magasanik, B. (1971). Genetics and metabolic control of enzymes responsible for histidine degradation in Salmonella typhimurium. 4-imidazolone-5-propionate amidohydrolase and N-formimino-L-glutamate formiminohydrolase. J Biol Chem 246, 3320-3329.
    • (1971) J Biol Chem , vol.246 , pp. 3320-3329
    • Smith, G.R.1    Halpern, Y.S.2    Magasanik, B.3
  • 21
    • 0025035371 scopus 로고
    • DNA-looping and enhancer activity: Association between DNA-bound NtrC activator and RNA polymerase at the bacterial glnA promoter
    • Su, W., Porter, S., Kustu, S. & Echols, H. (1990). DNA-looping and enhancer activity: association between DNA-bound NtrC activator and RNA polymerase at the bacterial glnA promoter. Proc Natl Acad Sci USA 87, 5504-5508.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 5504-5508
    • Su, W.1    Porter, S.2    Kustu, S.3    Echols, H.4
  • 22
    • 0020663424 scopus 로고
    • Klebsiella pneumoniae nifA product activates the Rhizobium meliloti nitrogenase promoter
    • Sundaresan, V., Jones, J. D. G., Ow, D. W. & Ausubel, F. M. (1983). Klebsiella pneumoniae nifA product activates the Rhizobium meliloti nitrogenase promoter. Nature 301, 728-732.
    • (1983) Nature , vol.301 , pp. 728-732
    • Sundaresan, V.1    Jones, J.D.G.2    Ow, D.W.3    Ausubel, F.M.4
  • 23
    • 0031028731 scopus 로고    scopus 로고
    • Isolation and properties of enhancer-bypass mutants of sigma 54
    • Syed, A. & Gralla, J. D. (1997). Isolation and properties of enhancer-bypass mutants of sigma 54. Mol Microbiol 23, 987-995.
    • (1997) Mol Microbiol , vol.23 , pp. 987-995
    • Syed, A.1    Gralla, J.D.2
  • 24
    • 0031740419 scopus 로고    scopus 로고
    • Identification of an N-terminal region of sigma 54 required for enhancer responsiveness
    • Syed, A. & Gralla, J. D. (1998). Identification of an N-terminal region of sigma 54 required for enhancer responsiveness. J Bacteriol 180, 5619-5625.
    • (1998) J Bacteriol , vol.180 , pp. 5619-5625
    • Syed, A.1    Gralla, J.D.2
  • 25
    • 0022429789 scopus 로고
    • The rapid generation of oligonucleotide-directed mutation at high frequency using phosphothioate-modified DNA
    • Taylor, J. W., Ott, J. & Eckstein, F. (1985). The rapid generation of oligonucleotide-directed mutation at high frequency using phosphothioate-modified DNA. Nucleic Acids Res 13, 8764-8785.
    • (1985) Nucleic Acids Res , vol.13 , pp. 8764-8785
    • Taylor, J.W.1    Ott, J.2    Eckstein, F.3
  • 27
    • 0028846535 scopus 로고
    • PCR mutagenesis identifies a polymerase-binding sequence of sigma 54 that includes a sigma 70 homology region
    • Tintut, Y. & Gralla, J. D. (1995). PCR mutagenesis identifies a polymerase-binding sequence of sigma 54 that includes a sigma 70 homology region. J Bacteriol 177, 5818-5825.
    • (1995) J Bacteriol , vol.177 , pp. 5818-5825
    • Tintut, Y.1    Gralla, J.D.2
  • 28
    • 0028206722 scopus 로고
    • Polymerase binding using a strongly acidic hydrophobic-repeat region of sigma 54
    • Tintut, Y., Wong, C. W., Jiang, Y., Hsish, M. & Gralla, J. D. (1994). Polymerase binding using a strongly acidic hydrophobic-repeat region of sigma 54. Proc Natl Acad Sci USA 91, 2120-2124.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 2120-2124
    • Tintut, Y.1    Wong, C.W.2    Jiang, Y.3    Hsish, M.4    Gralla, J.D.5
  • 30
    • 0000097521 scopus 로고
    • Prokaryotic enhancers
    • Edited by S. L. McKnight & K. R. Yamamoto. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
    • Weiss, D. S., Klose, K. E., Hoover, T. R., North, A. K., Porter, S. C., Wedel, A. B. & Kustu, S. (1992). Prokaryotic enhancers. In Transcriptional Regulation, pp. 667-694. Edited by S. L. McKnight & K. R. Yamamoto. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
    • (1992) Transcriptional Regulation , pp. 667-694
    • Weiss, D.S.1    Klose, K.E.2    Hoover, T.R.3    North, A.K.4    Porter, S.C.5    Wedel, A.B.6    Kustu, S.7
  • 31
    • 0028316752 scopus 로고
    • The domain structure of sigma 54 as determined by analysis of a set of deletion mutants
    • Wong, C. W., Tintut, Y. & Gralla, J. D. (1994). The domain structure of sigma 54 as determined by analysis of a set of deletion mutants. J Mol Biol 236, 81-90.
    • (1994) J Mol Biol , vol.236 , pp. 81-90
    • Wong, C.W.1    Tintut, Y.2    Gralla, J.D.3
  • 32
    • 0030894489 scopus 로고    scopus 로고
    • Unusual oligomerization required for activity of NtrC, a bacterial enhancer-binding protein
    • Wyman, C., Rombel, I., North, A. K., Bustamante, C. & Kustu, S. (1997). Unusual oligomerization required for activity of NtrC, a bacterial enhancer-binding protein. Science 275, 1658-1661.
    • (1997) Science , vol.275 , pp. 1658-1661
    • Wyman, C.1    Rombel, I.2    North, A.K.3    Bustamante, C.4    Kustu, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.