Nonenzymatic hydrolysis of oligoribonucleotides. V. The elements affecting the process of self-hydrolysis

Acta Biochimica Polonica

Volumn 46, Issue 1, 1999, Pages 145-153

  Bibiłło, Arkadiusz ^a   Ziomek, Krzysztof ^a   Figlerowicz, Marek ^a   Kierzek, Ryszard ^a  

^a POLISH ACADEMY OF SCIENCES   (Poland)

Author keywords

Catalytic RNA; Nonenzymatic hydrolysis of oligoribonucleotides; Ribozyme

Indexed keywords

RIBONUCLEASE; RIBOSOME RNA;

ANIMAL; ARTICLE; CHEMISTRY; CONFORMATION; ENZYME SPECIFICITY; GENETICS; HYDROLYSIS; METABOLISM; NUCLEOTIDE SEQUENCE; TETRAHYMENA THERMOPHILA;

ANIMALS; BASE SEQUENCE; HYDROLYSIS; NUCLEIC ACID CONFORMATION; RIBONUCLEASES; RNA, RIBOSOMAL; SUBSTRATE SPECIFICITY; TETRAHYMENA THERMOPHILA;

EID: 0032601720     PISSN: 0001527X     EISSN: None     Source Type: Journal    
DOI: 10.18388/abp.1999_4192     Document Type: Article

References (15)

1. Altman, S., Kirsebom, L. & Talbot, S. (1993) Recent studies of ribonuclease P. FASEB J. 7, 7-14.
2. Cech, T.R. (1990) Self-splicing of group I introns. Annu. Rev. Biochem. 59, 543-568.
3. Symons, R.H. (1992) Small catalytic RNAs. Annu. Rev. Biochem. 61, 641-671.
4. Kierzek, R. (1992) Nonenzymatic hydrolysis of oligoribonucleotides. Nucleic Acids Res. 20, 5079-5084.
5. Kierzek, R. (1992) Hydrolysis of oligoribonucleotides: Influence of sequence and length. Nucleic Acids Res. 20, 5073-5077.
6. McBride, L.J. & Caruthers, M.H. (1983) An investigation of several deoxynucleoside phosphoramidites useful for synthesizing deoxyoligonucleotides. Tetrahedron Lett. 24, 245-249.
7. Wincott, F., DiRenzo, A., Shaffer, C., Grimm, S., Tracz, D., Workman, C., Sweedler, D., Gonzalez, C., Scringe, S. & Usman, N. (1995) Synthesis, deprotection, analysis and purification of RNA and ribozymes. Nucleic Acids Res. 23, 2677-2684.
8. Davanloo, P., Rosenberg, A.H., Dunn, J.J. & Studier, F.W. (1984) Cloning and expression of the gene for bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. U.S.A. 81, 2035-2039.
9. Scheel, G. & Blackburn, P. (1979) Role of mammalian RNAse inhibitor in cell-free protein synthesis. Proc. Natl. Acad. Sci. U.S.A. 46, 4898-4902.
10. Ebeling, W., Hennrich, N., Klockow, M., Metz, H., Orth, H.D. & Lang, H. (1974) Proteinase K from Tritirachium album Limber. Eur. J. Biochem. 47, 91-97.
11. Bibiłło, A. (1998) Ph.D. Thesis, Institute of Bioorganic Chemistry, Polish Academy of Sciences.
12. Freier, S.M., Kierzek, R., Jaeger, J.A., Sugimoto, N., Caruthers, M.H., Neilson, T. & Turner, D.H. (1986) Improved free-energy parameters for predictions of RNA duplexes stability. Proc. Natl. Acad. Sci. U.S.A. 83, 9373-9377.
13. Burke, J.M., Belfast, M., Cech, T.R., Davis, R.W., Schweyen, R., Shub, D., Szostak, J.W. & Tabak, H. (1987) Structural conventions for group I introns. Nucleic Acids Res. 15, 7217-7221.
14. Zaug, A.J., Grosshans, C.A. & Cech, T.R. (1988) Sequence-specific endoribonuclease activity of the Tetrahymena ribozyme: Enhanced cleavage of certain oligonucleotide substrates that form mismatched ribozyme-substrate complexes. Biochemistry, 27, 8924-8931.
15. Banerjee, A.R., Jaeger, J.A. & Turner, D.H. (1993) Thermal unfolding of a group I ribozyme: The low-temperature transition is primarily disruption of tertiary structure. Biochemistry 32, 153-163.