-
1
-
-
0032553125
-
70binding site on the N terminus of the Escherichia coli RNA polymerase β′ subunit
-
70binding site on the N terminus of the Escherichia coli RNA polymerase β′ subunit. J. Biol. Chem. 273:1998;31381-31387.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 31381-31387
-
-
Arthur, T.M.1
Burgess, R.R.2
-
2
-
-
0026581288
-
The prokaryotic enhancer binding protein NTRC has ATPase activity which is phosphorylation and DNA dependent
-
Austin S., Dixon R. A. The prokaryotic enhancer binding protein NTRC has ATPase activity which is phosphorylation and DNA dependent. EMBO J. 11:1992;2219-2228.
-
(1992)
EMBO J.
, vol.11
, pp. 2219-2228
-
-
Austin, S.1
Dixon, R.A.2
-
3
-
-
0028335281
-
Identification of a DNA-contacting surface in the transcription factor sigma-54
-
Cannon W., Claverie-Martin F., Austin S., Buck M. Identification of a DNA-contacting surface in the transcription factor sigma-54. Mol. Microbiol. 11:1994;227-236.
-
(1994)
Mol. Microbiol.
, vol.11
, pp. 227-236
-
-
Cannon, W.1
Claverie-Martin, F.2
Austin, S.3
Buck, M.4
-
6
-
-
0033083794
-
Amino terminal sequences of sigma-N (54) inhibit RNA polymerase isomerisation
-
Cannon W. V., Gallegos M. T., Casaz P., Buck M. Amino terminal sequences of sigma-N (54) inhibit RNA polymerase isomerisation. Genes Dev. 13:1999;357-370.
-
(1999)
Genes Dev.
, vol.13
, pp. 357-370
-
-
Cannon, W.V.1
Gallegos, M.T.2
Casaz, P.3
Buck, M.4
-
7
-
-
0030693382
-
Probing the assembly of transcription initiation complexes through changes in sigma N protease sensitivity
-
Casaz P., Buck M. Probing the assembly of transcription initiation complexes through changes in sigma N protease sensitivity. Proc. Natl Acad. Sci. USA. 94:1997;12145-12150.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 12145-12150
-
-
Casaz, P.1
Buck, M.2
-
8
-
-
0033555643
-
Region I modifies DNA binding Domain conformation of sigma 54 within the holoenzyme
-
Casaz P., Buck M. Region I modifies DNA binding Domain conformation of sigma 54 within the holoenzyme. J. Mol. Biol. 285:1999;507-514.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 507-514
-
-
Casaz, P.1
Buck, M.2
-
9
-
-
0002416598
-
Interaction of RNA polymerase with the DNA template
-
R. Losick, & M. Chamberlin. Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Chamberlin M. J. Interaction of RNA polymerase with the DNA template. Losick R., Chamberlin M. RNA Polymerase. 1976a;159-191 Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1976)
RNA Polymerase
, pp. 159-191
-
-
Chamberlin, M.J.1
-
10
-
-
0001796834
-
RNA polymerase - an overview
-
R. Losick, & M. Chamberlin. Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Chamberlin M. J. RNA polymerase - an overview. Losick R., Chamberlin M. RNA Polymerase. 1976b;17-67 Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1976)
RNA Polymerase
, pp. 17-67
-
-
Chamberlin, M.J.1
-
11
-
-
0019944637
-
Interaction of Bacillus subtilis RNA polymerase core with two specificity-determining subunits. Competition between sigma and the SPO1 gene 28 protein
-
Chelm B. K., Duffy J. J., Geiduschek E. P. Interaction of Bacillus subtilis RNA polymerase core with two specificity-determining subunits. Competition between sigma and the SPO1 gene 28 protein. J. Biol. Chem. 257:1982;6501-6508.
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 6501-6508
-
-
Chelm, B.K.1
Duffy, J.J.2
Geiduschek, E.P.3
-
12
-
-
0025744584
-
Escherichia coli sigma 70 and NusA proteins. I. Binding interactions with core RNA polymerase in solution and within the transcription complex
-
Gill S. C., Weitzel S. E., von Hippel P. H. Escherichia coli sigma 70 and NusA proteins. I. Binding interactions with core RNA polymerase in solution and within the transcription complex. J. Mol. Biol. 220:1991;307-324.
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 307-324
-
-
Gill, S.C.1
Weitzel, S.E.2
Von Hippel, P.H.3
-
13
-
-
0025946047
-
Transcriptional control-lessons from an E. coli promoter data base
-
Gralla J. D. Transcriptional control-lessons from an E. coli promoter data base. Cell. 66:1991;415-418.
-
(1991)
Cell
, vol.66
, pp. 415-418
-
-
Gralla, J.D.1
-
15
-
-
0023057529
-
Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins
-
Gribskov M., Burgess R. R. Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins. Nucl. Acids Res. 14:1986;6745-6763.
-
(1986)
Nucl. Acids Res.
, vol.14
, pp. 6745-6763
-
-
Gribskov, M.1
Burgess, R.R.2
-
16
-
-
0000776061
-
Sigma factors
-
K. Yamamoto, & S. McKnight. Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Gross C. A., Lonetto M., Losick R. Sigma factors. Yamamoto K., McKnight S. Transcriptional Regulation. 1992;129-176 Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1992)
Transcriptional Regulation
, pp. 129-176
-
-
Gross, C.A.1
Lonetto, M.2
Losick, R.3
-
17
-
-
0032578471
-
Promoter opening via a DNA fork junction binding activity
-
Guo Y., Gralla J. D. Promoter opening via a DNA fork junction binding activity. Proc. Natl Acad. Sci. USA. 95:1998;11655-11660.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 11655-11660
-
-
Guo, Y.1
Gralla, J.D.2
-
18
-
-
0023918675
-
Structure and function of bacterial sigma factors
-
Helmann J. D., Chamberlin M. J. Structure and function of bacterial sigma factors. Annu. Rev. Biochem. 57:1988;839-872.
-
(1988)
Annu. Rev. Biochem.
, vol.57
, pp. 839-872
-
-
Helmann, J.D.1
Chamberlin, M.J.2
-
19
-
-
0025778597
-
Bipartite functional map of the E. coli RNA polymerase a subunit: Involvement of the C-terminal region in transcription activation by cAMP-CRP
-
Igarashi K., Ishihama A. Bipartite functional map of the E. coli RNA polymerase a subunit: involvement of the C-terminal region in transcription activation by cAMP-CRP. Cell. 65:1991;1015-1022.
-
(1991)
Cell
, vol.65
, pp. 1015-1022
-
-
Igarashi, K.1
Ishihama, A.2
-
20
-
-
0029810991
-
Regulation of RNA polymerase sigma subunit levels in Escherichia coli: Intracellular levels of four species of sigma subunits under various growth conditions
-
Jishage M., Iwata A., Ueda S., Ishihama A. Regulation of RNA polymerase sigma subunit levels in Escherichia coli: intracellular levels of four species of sigma subunits under various growth conditions. J. Bacteriol. 178:1996;5447-5451.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5447-5451
-
-
Jishage, M.1
Iwata, A.2
Ueda, S.3
Ishihama, A.4
-
21
-
-
0030612603
-
32mutant with a single amino acid change in the highly conserved region 2.2 exhibits reduced core RNA polymerase affinity
-
32mutant with a single amino acid change in the highly conserved region 2.2 exhibits reduced core RNA polymerase affinity. Proc. Natl Acad. Sci. USA. 94:1997;4907-4912.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 4907-4912
-
-
Joo, D.M.1
Ng, N.2
Calendar, R.3
-
22
-
-
0029874910
-
Identification, nucleotide sequence, and characterization of PspF, the transcriptional activator of the Escherichia coli stress-induced psp operon
-
Jovanovic G., Weiner L., Model P. Identification, nucleotide sequence, and characterization of PspF, the transcriptional activator of the Escherichia coli stress-induced psp operon. J. Bacteriol. 178:1996;1936-1945.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 1936-1945
-
-
Jovanovic, G.1
Weiner, L.2
Model, P.3
-
25
-
-
0025737880
-
Use of in vitro protein synthesis from polymerase chain reaction-generated templates to study interaction ofEscherichia coli transcription factors with core RNA polymerase and for epitope mapping of monoclonal antibodies
-
Lesley S. C., Brow M. A. D., Burgess R. R. Use of in vitro protein synthesis from polymerase chain reaction-generated templates to study interaction ofEscherichia coli transcription factors with core RNA polymerase and for epitope mapping of monoclonal antibodies. J. Biol. Chem. 266:1991;2632-2638.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 2632-2638
-
-
Lesley, S.C.1
Brow, M.A.D.2
Burgess, R.R.3
-
26
-
-
0026612797
-
The sigma 70 family: Sequence conservation and evolutionary relationships
-
Lonetto M., Gribskov M., Gross C. A. The sigma 70 family: sequence conservation and evolutionary relationships. J. Bacteriol. 174:1992;3843-3849.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 3843-3849
-
-
Lonetto, M.1
Gribskov, M.2
Gross, C.A.3
-
29
-
-
0026592145
-
The helix-turn-helix motif of sigma 54 is involved in recognition of the -13 promoter region
-
Merrick M. J., Chambers S. The helix-turn-helix motif of sigma 54 is involved in recognition of the -13 promoter region. J. Bacteriol. 174:1992;7221-7226.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7221-7226
-
-
Merrick, M.J.1
Chambers, S.2
-
30
-
-
0022423670
-
The nucleotide sequence of the nitrogen-regulation gene ntrA of Klebsiella pneumoniae and comparison with conserved features in bacterial RNA polymerase sigma factors
-
Merrick M. J., Gibbins J. R. The nucleotide sequence of the nitrogen-regulation gene ntrA of Klebsiella pneumoniae and comparison with conserved features in bacterial RNA polymerase sigma factors. Nucl. Acids Res. 13:1985;7607-7620.
-
(1985)
Nucl. Acids Res.
, vol.13
, pp. 7607-7620
-
-
Merrick, M.J.1
Gibbins, J.R.2
-
31
-
-
0023665129
-
Initiation of transcription at the bacterial glnA p2 promoter by purified E. coli components is facilitated by enhancers
-
Ninfa A. J., Reitzer L. J., Magasanik B. Initiation of transcription at the bacterial glnA p2 promoter by purified E. coli components is facilitated by enhancers. Cell. 50:1987;1039-1046.
-
(1987)
Cell
, vol.50
, pp. 1039-1046
-
-
Ninfa, A.J.1
Reitzer, L.J.2
Magasanik, B.3
-
32
-
-
0030695196
-
54) defective between closed and stable open promoter complex formation
-
54) defective between closed and stable open promoter complex formation. Mol. Microbiol. 26:1997;655-664.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 655-664
-
-
Oguiza, J.A.1
Buck, M.2
-
34
-
-
0028875725
-
Three-dimensional structure of E. coli core RNA polymerase: Promoter binding and elongation conformations of the enzyme
-
Polyakov A., Severinova E., Darst S. A. Three-dimensional structure of E. coli core RNA polymerase: promoter binding and elongation conformations of the enzyme. Cell. 83:1995;365-373.
-
(1995)
Cell
, vol.83
, pp. 365-373
-
-
Polyakov, A.1
Severinova, E.2
Darst, S.A.3
-
35
-
-
0024598928
-
Function of a bacterial activator protein that binds to transcriptional enhancers
-
Popham D., Szesto D., Keener J., Kustu S. Function of a bacterial activator protein that binds to transcriptional enhancers. Science. 243:1989;629-635.
-
(1989)
Science
, vol.243
, pp. 629-635
-
-
Popham, D.1
Szesto, D.2
Keener, J.3
Kustu, S.4
-
36
-
-
0025937287
-
Purification of the alternative sigma factor, sigma 54, from Salmonella typhimurium and characterization of sigma 54-holoenzyme
-
Popham D., Keener J., Kustu S. Purification of the alternative sigma factor, sigma 54, from Salmonella typhimurium and characterization of sigma 54-holoenzyme. J. Biol. Chem. 266:1991;19510-19518.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 19510-19518
-
-
Popham, D.1
Keener, J.2
Kustu, S.3
-
37
-
-
0027291015
-
Prediction of protein structure at better than 70 % accuracy
-
Rost B., Sander C. Prediction of protein structure at better than 70 % accuracy. J. Mol. Biol. 232:1993;584-599.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 584-599
-
-
Rost, B.1
Sander, C.2
-
39
-
-
0030589041
-
70subunit
-
70subunit. J. Mol. Biol. 263:1996;637-647.
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 637-647
-
-
Severinova, E.1
Severinov, K.2
Fenyö, D.3
Marr, M.4
Brody, E.N.5
Roberts, J.W.6
Chait, B.T.7
Darst, S.A.8
-
40
-
-
0031740419
-
Identification of an N-terminal region of sigma 54 required for enhancer responsiveness
-
Syed A., Gralla J. D. Identification of an N-terminal region of sigma 54 required for enhancer responsiveness. J. Bacteriol. 180:1998;5619-5625.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5619-5625
-
-
Syed, A.1
Gralla, J.D.2
-
42
-
-
0028846535
-
PCR mutagenesis identifies a polymerase-binding sequences of sigma 54 that includes a sigma 70 homology region
-
Tintut Y., Gralla J. D. PCR mutagenesis identifies a polymerase-binding sequences of sigma 54 that includes a sigma 70 homology region. J. Bacteriol. 177:1995;5818-5825.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 5818-5825
-
-
Tintut, Y.1
Gralla, J.D.2
-
43
-
-
0028206722
-
RNA polymerase binding using a strongly acidic hydrophobic-repeat region of sigma 54
-
Tintut Y., Wong C., Jiang Y., Hsieh M., Gralla J. D. RNA polymerase binding using a strongly acidic hydrophobic-repeat region of sigma 54. Proc. Natl Acad. Sci. USA. 91:1994;2120-2124.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 2120-2124
-
-
Tintut, Y.1
Wong, C.2
Jiang, Y.3
Hsieh, M.4
Gralla, J.D.5
-
44
-
-
0029087634
-
A novel bacterial transcription cycle involving sigma 54
-
Tintut Y., Wang J. T., Gralla J. D. A novel bacterial transcription cycle involving sigma 54. Genes Dev. 9:1995;2305-2313.
-
(1995)
Genes Dev.
, vol.9
, pp. 2305-2313
-
-
Tintut, Y.1
Wang, J.T.2
Gralla, J.D.3
-
45
-
-
0014184349
-
Initiation of DNA-dependent RNA synthesis and the effect of heparin on RNA polymerase
-
Walter G., Zillig W., Palm P., Fuchs E. Initiation of DNA-dependent RNA synthesis and the effect of heparin on RNA polymerase. Eur. J. Biochem. 3:1967;194-201.
-
(1967)
Eur. J. Biochem.
, vol.3
, pp. 194-201
-
-
Walter, G.1
Zillig, W.2
Palm, P.3
Fuchs, E.4
-
46
-
-
0030984217
-
Multiple pathways to bypass the enhancer requirement of sigma 54 RNA polymerase: Roles for DNA and protein determinants
-
Wang J. T., Syed A., Gralla J. D. Multiple pathways to bypass the enhancer requirement of sigma 54 RNA polymerase: roles for DNA and protein determinants. Proc. Natl Acad. Sci. USA. 94:1997;9538-9543.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 9538-9543
-
-
Wang, J.T.1
Syed, A.2
Gralla, J.D.3
-
47
-
-
0026070143
-
The phosphorylated form of the enhancer-binding protein NtrC has an ATPase activity that is essential for activation of transcription
-
Weiss D. S., Batut J., Klose K. E., Keener J., Kustu S. The phosphorylated form of the enhancer-binding protein NtrC has an ATPase activity that is essential for activation of transcription. Cell. 67:1991;155-167.
-
(1991)
Cell
, vol.67
, pp. 155-167
-
-
Weiss, D.S.1
Batut, J.2
Klose, K.E.3
Keener, J.4
Kustu, S.5
-
48
-
-
0024369041
-
Overproduced bacteriophage T4 gene 33 protein binds RNA polymerase
-
Williams K. P., Muller R., Ruger W., Geiduschek E. P. Overproduced bacteriophage T4 gene 33 protein binds RNA polymerase. J. Bacteriol. 171:1989;3579-3582.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 3579-3582
-
-
Williams, K.P.1
Muller, R.2
Ruger, W.3
Geiduschek, E.P.4
-
49
-
-
0028316752
-
The domain structure of sigma 54 as determined by analysis of a set of deletion mutants
-
Wong C., Tintut Y., Gralla J. D. The domain structure of sigma 54 as determined by analysis of a set of deletion mutants. J. Mol. Biol. 236:1994;81-90.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 81-90
-
-
Wong, C.1
Tintut, Y.2
Gralla, J.D.3
-
50
-
-
0002719153
-
On the role of different subunits of DNA-dependent RNA polymerase from E. coli in the transcription process
-
Zillig W., Zechel K., Rabussay D., Schachner M., Sethi V. S., Palm P., Heil A., Seifert W. On the role of different subunits of DNA-dependent RNA polymerase from E. coli in the transcription process. Cold Spring Harbor Symp. Quant. Biol. 35:1971;47-58.
-
(1971)
Cold Spring Harbor Symp. Quant. Biol.
, vol.35
, pp. 47-58
-
-
Zillig, W.1
Zechel, K.2
Rabussay, D.3
Schachner, M.4
Sethi, V.S.5
Palm, P.6
Heil, A.7
Seifert, W.8
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