Identification and requirement of three ribosome binding domains in dsRNA-dependent protein kinase (PKR)

Biochemistry

Volumn 37, Issue 39, 1998, Pages 13816-13826

  Wu, Shiyong ^a   Kumar, Kotlo U ^a   Kaufman, Randal J ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN KINASE; TRANSFER RNA; VIRUS RNA;

ANIMAL CELL; ANTIVIRAL ACTIVITY; ARTICLE; ENZYME ACTIVATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN SYNTHESIS; RIBOSOME; TRANSLATION INITIATION; VIRUS CELL INTERACTION; VIRUS INFECTION; VIRUS REPLICATION;

ADENOVIRIDAE; ANIMALS; BINDING SITES; CERCOPITHECUS AETHIOPS; COS CELLS; EIF-2 KINASE; GENETIC VECTORS; HUMANS; LYSINE; PEPTIDE FRAGMENTS; PROLINE; PROTEIN STRUCTURE, TERTIARY; RIBOSOMES; RNA, DOUBLE-STRANDED; RNA, RIBOSOMAL; RNA, VIRAL; TRANSFECTION;

ADENOVIRIDAE; ANIMALIA; EUKARYOTA; VACCINIA; VACCINIA VIRUS;

EID: 0032578417     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi981472h     Document Type: Article

References (62)

1. Pain, V. M. (1996) Eur. J. Biochem. 236, 747-771.
2. Merrick, W. C. (1992) Microbiol. Rev. 56, 291-315.
3. Hershey, J. W. (1991) Annu. Rev. Biochem. 60, 717-755.
4. Mathews, M. B. (1996) in Translational Control (Hershey, J. W. B., Mathews, M. B., and Sonenberg, N., Eds.) pp 505-548, Cold Spring Harbor Laboratory Press, Plainview, NY.
5. Chong, K. L., Feng, L., Schappert, K., Meurs, E., Donahue, T. F., Friesen, J. D., Hovanessian, A. G., and Williams, B. R. (1992) EMBO J. 11, 1553-1562.
6. Meurs, E. F., Galabru, J., Barber, G. N., Katze, M. G., and Hovanessian, A. G. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 232-236.
7. Koromilas, A. E., Roy, S., Barber, G. N., Katze, M. G., and Sonenberg, N. (1992) Science 257, 1685-1689.
8. Marcus, P. I., and Sekellick, M. J. (1988) J. Gen. Virol. 69 (Pt 7), 1637-1645.
9. Tiwari, R. K., Kusari, J., Kumar, R., and Sen, G. C. (1988) Mol. Cell. Biol. 8, 4289-4294.
10. Yang, Y. L., Reis, L. F., Pavlovic, J., Aguzzi, A., Schafer, R., Kumar, A., Williams, B. R., Aguet, M., and Weissmann, C. (1995) EMBO J. 14, 6095-6106.
11. Zinn, K., Keller, A., Whittemore, L. A., and Maniatis, T. (1988) Science 240, 210-213.
12. Petryshyn, R., Chen, J. J., and London, I. M. (1984) J. Biol. Chem. 259, 14736-14742.
13. Petryshyn, R., Chen, J. J., and London, I. M. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 1427-1431.
14. Lee, S. B., and Esteban, M. (1994) Virology 199, 491-496.
15. Der, S. D., Yang, Y. L., Weissmann, C., and Williams, B. R. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 3279-3283.
16. Srivastava, S. P., Kumar, K. U., and Kaufman, R. J. (1998) J. Biol. Chem. 273, 2416-2423.
17. Meurs, E., Chong, K., Galabru, J., Thomas, N. S., Kerr, I. M., Williams, B. R., and Hovanessian, A. G. (1990) Cell 62, 379-390.
18. Bycroft, M., Grunert, S., Murzin, A. G., Proctor, M., and St Johnston, D. (1995) EMBO J. 14, 3563-3571.
19. St Johnston, D., Brown, N. H., Gall, J. G., and Jantsch, M. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 10979-10983.
20. McCormack, S. J., Thomis, D. C., and Samuel, C. E. (1992) Virology 188, 47-56.
21. Barber, G. N., Thompson, S., Lee, T. G., Strom, T., Jagus, R., Darveau, A., and Katze, M. G. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 4278-4282.
22. Romano, P. R., Green, S. R., Barber, G. N., Mathews, M. B., and Hinnebusch, A. G. (1995) Mol. Cell. Biol. 15, 365-378.
23. Kostura, M., and Mathews, M. B. (1989) Mol. Cell. Biol. 9, 1576-1586.
24. Langland, J. O., and Jacobs, B. L. (1992) J. Biol. Chem. 267, 10729-10736.
25. Thomis, D. C., and Samuel C. E. (1993) J. Virol. 67, 7695-7700.
26. Patel, R. C., Stanton, P., McMillan, N. M., Williams, B. R., and Sen, G. C. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 8283-8287.
27. Cosentino, G. P., Venkatesan, S., Serlucaa, F. C., Green, S. R., Mathews, M. B., and Sonenberg, N. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9445-9449.
28. Wu, S., and Kaufman, R. J. (1996) J. Biol. Chem. 271, 1756-1763.
29. Wu, S., and Kaufman, R. J. (1997) J. Biol. Chem. 272, 1291-1296.
30. Bevilacqua, P. C., and Cech, T. R. (1996) Biochemistry 35, 9983-9994.
31. Schmedt, C., Green, S. R., Manche, L., Taylor, D. R., Ma, Y., and Mathews, M. B. (1995) J. Mol. Biol. 249, 29-44.
32. Manche, L., Green, S. R., Schmedt, C., and Mathews, M. B. (1992) Mol. Cell. Biol. 12, 5238-5248.
33. Patel, R. C., Stanton, P., and Sen, G. C. (1996) J. Biol. Chem. 271, 25657-25663.
34. McMillan, N. A., Carpick, B. W., Hollis, B., Toone, W. M., Zamanian-Daryoush, M., and Williams, B. R. (1995) J. Biol. Chem. 270, 2601-2606.
35. Schwemmle, M., Clemens, M. J., Hilse, K., Pfeifer, K., Troster, H., Muller, W. E., and Bachmann, M. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 10292-10296.
36. Jimenez-Garcia, L. F., Green, S. R., Mathews, M. B., and Spector, D. L. (1993) J. Cell Sci. 106, 11-22.
37. Jeffrey, I. W., Kadereit, S., Meurs, E. F., Metzger, T., Bachmann, M., Schwemmle, M., Hovanessian, A. G., and Clemens, M. J. (1995) Exp. Cell. Res. 218, 17-27.
38. Levin, D., and London, I. M. (1978) Proc. Natl. Acad. Sci. U.S.A. 75, 1121-1125.
39. Samuel, C. E., Knutson, G. S., Berry, M. J., Atwater, J. A., and Laskey, S. R. (1986) Methods Enzymol. 119, 499-516.
40. Zhu, A., Romano, P. R., and Wek, R. C. (1997) J. Biol. Chem. 272, 14434-14441.
41. Siekierka, J., Mariano, T. M., Reichel, P. A., and Mathews, M. B. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 1959-1963.
42. Schneider, R. J., Safer, B., Munemitsu, S. M., Samuel, C. E., and Shenk, T. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 4321-4325.
43. Sharp, T. V., Schwemmle, M., Jeffrey, I., Laing, K., Mellor, H., Proud, C. G., Hilse, K., and Clemens, M. J. (1993) Nucleic Acids Res. 21, 4483-4490.
44. Chang, H. W., Watson, J. C., and Jacobs, B. L. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 4825-4829.
45. Davies, M. V., Elroy-Stein, O., Jagus, R., Moss, B., and Kaufman, R. J. (1992) J. Virol. 66, 1943-1950.
46. Davies, M. V., Chang, H. W., Jacobs, B. L., and Kaufman, R. J. (1993) J. Virol. 67, 1688-1692.
47. Lee, T. G., Tomita, J., Hovanessian, A. G., and Katze, M. G. (1992) J. Biol. Chem. 267, 14238-14243.
48. Ransone, L. J., and Dasgupta, A. (1988) J. Virol. 62, 3551-3557.
49. Park, H., Davies, M. V., Langland, J. O., Chang, H. W., Nam, Y. S., Tartaglia, J., Paoletti, E., Jacobs, B. L., Kaufman, R. J., and Venkatesan, S. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 4713-4717.
50. Mundschau, L. J., and Faller, D. V. (1992) J. Biol. Chem. 267, 23092-23098.
51. Ziao, Q., Sharp, T. V., Jeffrey, I. W., James, M. C., Pruijn, G. J., van Venrooij, W. J., and Clemens M. J. (1994) Nucleic Acids Res. 22, 2512-2518.
52. Judware, R., and Petryshyn, R. (1992) J. Biol. Chem. 267, 21685-21690.
53. Wu, S., Rehemtulla, A., Gupta, N. K., and Kaufman, R. J. (1996) Biochemistry 35, 8275-8280.
54. Sanger, F., Nicklen, S., and Coulson, A. R. (1977) Proc. Natl. Acad. Sci. U.S.A. 74, 5463-5467.
55. Kaufman, R. J. (1985) Proc. Natl. Acad. Sci. U.S.A. 82, 689-693.
56. Kaufman, R. J. (1990) Methods Enzymol. 185, 487-511.
57. Laemmli, U. K. (1970) Nature 227, 680-685.
58. Samuel, C. E., Knutson, G. S., Berry, M. J., Atwater, J. A., and Lasky, S. R. (1986) Methods Enzymol. 119, 499-516.
59. Carpick, B. W., Graziano, W., Schneider, D., Maitra, R. K., Lee, X., and Williams, B. R. G. (1997) J. Biol. Chem. 272, 9510-9516.
60. Ramirez, M., Wek, R. C., and Hinnebusch, A. G. (1991) Mol. Cell. Biol. 11, 3027-3036.
61. Ramirez, M., Wek, R. C., Vazquez de Aldana, C. R., Jackson, B. M., Freeman, B., and Hinnebusch, A. G. (1992) Mol. Cell. Biol. 12, 5801-5815.
62. Kumar, Srivastava, and Kaufman (1998) Mol. Cell. Biol. (in press).