Structure of cyclodextrin glycosyltransferase complexed with a derivative of its main product β-cyclodextrin

Biochemistry

Volumn 37, Issue 17, 1998, Pages 5909-5915

  Schmidt, Andreas K ^a   Cottaz, Sylvain ^b   Driguez, Hugues ^b   Schulz, Georg E ^a  

^a UNIVERSITY OF FREIBURG   (Germany)

^b CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BETA CYCLODEXTRIN; CYCLODEXTRIN; GLYCOSYLTRANSFERASE;

ARTICLE; CATALYSIS; COMPLEX FORMATION; CRYSTAL STRUCTURE; CYCLIZATION; ENZYME ANALYSIS; ENZYME BINDING; ENZYME CONFORMATION; ENZYME STRUCTURE; GLYCOSYLATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; X RAY ANALYSIS;

BACILLUS; BETA-CYCLODEXTRINS; BINDING SITES; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; CYCLODEXTRINS; ENZYME ACTIVATION; GLUCOSYLTRANSFERASES; MACROMOLECULAR SUBSTANCES; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; PROTEIN BINDING; PROTEIN CONFORMATION;

EID: 0032574818     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9729918     Document Type: Article

References (55)

1. Saenger, W. (1980) Angew. Chem., Int. Ed. Engl. 19, 344-362.
2. Szejtli, J. (1988) Cyclodextrin Technology, Kluvver Academic Publishers, Dordrecht, The Netherlands.
3. Wenz, G. (1994) Angew. Chem., Int. Ed. Engl. 33, 803-822.
4. Terada, Y., Yanase, M., Takata, H., Takaha, T., and Okada, S. (1997) J. Biol. Chem. 272, 15729-15733.
5. Klein, C., and Schulz, G. E. (1991) J. Mol. Biol. 217, 737-750.
6. Kubota, M., Matsuura, Y., Sakai, S., and Katsube, Y. (1991) Denpun Kagaku 38, 141-146.
7. Lawson, C. L., van Montfort, R., Strokopytov, B., Rozeboom, H. J., Kalk, K. H., de Vries, G. E., Penninga, D., Dijkhuizen, L., and Dijkstra, B. W. (1994) J. Mol. Biol. 236, 590-600.
8. Knegtel, R. M. A., Wind, R. D., Rozeboom, H. J., Kalk, K. H., Buitelaar, R. M., Dijkhuizen, L., and Dijkstra, B. W. (1996) J. Mol. Biol. 256, 611-622.
9. Harata, K., Haga, K., Nakamura, A., Aoyagi, M., and Yamane, K. (1996) Acta Crystallogr. D52, 1136-1145.
10. Hofmann, B. E., Bender, H., and Schulz, G. E. (1989) J. Mol. Biol. 209, 793-800.
11. Nitschke, L., Heeger, K., Bender, H., and Schulz, G. E. (1990) Appl. Microbiol. Biotechnol. 33, 542-546.
12. Matsuura, Y., Kusunoki, M., Harada, W., and Kakudo, M. (1984) J. Biochem. (Tokyo) 95, 697-702.
13. Boel, E., Brady, L., Brzozowski, A. M., Derewenda, Z., Dodson, G. G., Jensen, V. J., Petersen, S. B., Swift, H., Thim, L., and Woldike, H. F. (1990) Biochemistry 29, 6244-6249.
14. Qian, M., Haser, R., and Payan, F. (1993) J. Mol. Biol. 231, 785-799.
15. Kadziola, A., Abe, J., Svensson, B., and Haser, R. (1994) J. Mol. Biol. 239, 104-121.
16. Machius, M., Wiegand, G., and Huber, R. (1995) J. Mol. Biol. 246, 545-559.
17. Brayer, G. D., Luo, Y., and Withers, S. G. (1995) Protein Sci. 4, 1730-1742.
18. Ramasubbu, N., Paloth, V., Luo, Y., Brayer, G. D., and Levine, M. J. (1996) Acta Crystallogr. D52, 435-446.
19. Morishita, Y., Hasegawa, K., Matsuura, Y., Katsube, Y., Kubota, M., and Sakai, S. (1997) J. Mol. Biol. 267, 661-672.
20. Henrissat, B. (1991) Biochem. J. 280, 309-316.
21. Knegtel, R. M. A., Strokopytov, B., Penninga, D., Faber, O. G., Rozeboom, H. J., Kalk, K. H., Dijkhuizen, L., and Dijkstra, B. W. (1995) J. Biol. Chem. 270, 29256-29264.
22. Buisson, G., Duée, E., Haser, R., and Payan, F. (1987) EMBO J. 6, 3909-3916.
23. Holm, L., Koivula, A. K., Lehtovaara, P. M., Hemminki, A., and Knowles, J. K. C. (1990) Protein Eng. 3, 181-191.
24. Takase, K., Matsumoto, T., Mizuno, H., and Yamane, K. (1992) Biochim. Biophys. Acta 1120, 281-288.
25. Klein, C., Hollender, J., Bender, H., and Schulz, G. E. (1992) Biochemistry 31, 8740-8746.
26. Nakamura, A., Haga, K., Ogawa, S., Kuwano, K., Kimura, K., and Yamane, K. (1992) FEBS Lett. 296, 37-40.
27. Strokopytov, B., Penninga, D., Rozeboom, H. J., Kalk, K. H., Dijkhuizen, L., and Dijkstra, B. W. (1995) Biochemistry 34, 2234-2240.
28. Mosi, R., He, S., Uitdehaag, J., Dijkstra, B. W., and Withers, S. G. (1997) Biochemistry 36, 9927-9934.
29. Bender, H. (1990) Carbohydr. Res. 206, 257-267.
30. Strokopytov, B., Knegtel, R. M. A., Penninga, D., Rozeboom, H. J., Kalk, K. H., Dijkhuizen, L., and Dijkstra, B. W. (1996) Biochemists 35, 4241-4249.
31. Kubota, M., Matsuura, Y., Sakai, S., and Katsube, Y. (1994) Oyo Toshitsu Kagaku 41, 245-253.
32. Cottaz, S., and Driguez, H. (1989) Synthesis, 755-758.
33. Kabsch, W. (1988) J. Appl. Crystallogr. 21, 67-71.
34. Jiang, J.-S., and Brünger, A. T. (1994) J. Mol. Biol. 243, 100-115.
35. Jones, T. A., Zou, J.-Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. A47, 110-119.
36. Bock, K., Duus, J. O., Refn, S. (1994) Carbohydr. Res. 253, 51-67.
37. Driguez, H. (1997) in Glvcoscience (Driguez, H., and Thiem, J., Eds.), Vol. 187, pp 85-116, Springer-Verlag, Berlin.
38. IUPAC and IUBMB, Joint Commission, Nomenclature for carbohydrates, 2-Carb-37, oligosaccharides (1996) World Wide Web http://www.chem.qmw.ac.uk/iupac/2carb/.
39. Davies, G. J., Wilson, K. S., and Henrissat, B. (1997) Biochem. J. 321, 557-559.
40. Schechter, I., and Berger, A. (1967) Biochem. Biophys. Res. Commun. 27, 157-162.
41. Penninga, D., Strokopytov, B., Rozeboom, H. J., Lawson, C. L., Dijkstra, B. W., Bergsma, J., and Dijkhuizen, L. (1995) Biochemistry 34, 3368-3376.
42. Fujiwara, S., Kakihara, H., Sakaguchi, K., and Imanaka, T. (1992) J. Bacteriol. 174, 7478-7481.
43. Nakamura, A., Haga, K., and Yamane, K. (1994) Biochemistry 33, 9929-9936.
44. Sin, K. A., Nakamura, A., Masaki, H., Matsuura, Y., and Uozumi, T. (1994) J. Biotechnol. 32, 283-288.
45. Vyas, N. K. (1991) Curr. Opin. Struct. Biol. 1, 732-740.
46. Quiocho, F. A., Spurlino, J. C., and Rodseth, L. E. (1997) Structure 5, 997-1015.
47. Meyer, J. E. W., and Schulz, G. E. (1997) Protein Sci. 6, 1084-1091.
48. Lindner, K., and Saenger, W. (1982) Carbohydr. Res. 99, 103-115.
49. Mikami, B., Hehre, E. J., Sato, M., Katsube, Y., Hirose, M., Morita, Y., and Sacchettini, J. C. (1993) Biochemistry 32, 6836-6845.
50. Sharff, A. J., Rodseth, L. E., and Quiocho, F. A. (1993) Biochemistry 32, 10553-10559.
51. Larson, S. B., Greenwood, A., Cascio, D., Day, J., McPherson, A. (1994) J. Mol. Biol. 235, 1560-1584.
52. Merritt, E. A., and Murphy, M. E. P. (1994) Acta Crystallogr. D50, 869-873.
53. Sharp, K., and Honig, B. (1990) Annu. Rev. Biophys. Biophys. Chem. 19, 301-332.
54. Connolly, M. L. (1993) J. Mol. Graphics 11, 139-141.
55. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.