The DNA sequence of the RK strain of human herpesvirus 7

Virology

Volumn 244, Issue 1, 1998, Pages 119-132

  Megaw, A George ^a   Rapaport, Debora ^b   Avidor, Boaz ^c   Frenkel, Niza ^b   Davison, Andrew J ^a  

^a INSTITUTE OF VIROLOGY   (United Kingdom)

^b TEL AVIV UNIVERSITY   (Israel)

^c TEL AVIV SOURASKY MEDICAL CENTER   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DNA SEQUENCE; GENE SEQUENCE; HERPES VIRUS; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; VIRAL GENETICS; VIRION; VIRUS GENOME; VIRUS STRAIN;

ANIMALIA; DNA VIRUSES; HERPES; HERPESVIRIDAE; HERPESVIRUS 7; HUMAN HERPESVIRUS 6; HUMAN HERPESVIRUS 7;

EID: 0032565397     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1998.9105     Document Type: Article

References (32)

1. Berneman Z. N., Ablashi D. V., Li G., Eger-Fletcher M., Reitz M. S. Jr., Hung C.-L., Brus I., Komaroff A. L., Gallo R. C. Human herpesvirus 7 is a T-lymphotropic virus and is related to, but significantly different from, human herpesvirus 6 and human cytomegalovirus. Proc. Natl. Acad. Sci. USA. 89:1992a;10552-10556.
2. Berneman Z. N., Gallo R. C., Ablashi D. V., Frenkel N., Katsafanas G., Kramarsky B., Brus I. Human herpesvirus 7 (HHV-7) strain JI: Independent confirmation of HHV-7. J. Infect. Dis. 166:1992b;690-691.
3. Black J. B., Pellett P. E. Human herpesvirus 7. Rev. Med. Virol. 3:1993;217-223.
4. Chee M. S., Bankier A. T., Beck S., Bohni R., Brown C. M., Cerny R., Horsnell T., Hutchison C. A. III, Kouzarides T., Martignetti J. A., Preddie E., Satchwell S. C., Tomlinson P., Weston K. M., Barrell B. G. Analysis of the protein-coding content of the sequence of human cytomegalovirus strain AD169. Curr. Top. Microbiol. Immunol. 154:1990;125-169.
5. Davison A. J. Experience in shotgun sequencing a 134 kilobase pair DNA molecule. DNA Sequence. 1:1991;389-394.
6. Di Luca D., Katsafanas G., Schirmer E. C., Balachandran N., Frenkel N. The replication of viral and cellular DNA in human herpesvirus 6-infected cells. Virology. 175:1990;199-210.
7. Dolan A., Arbuckle M., McGeoch D. J. Sequence analysis of the splice junction in the transcript of herpes simplex virus type 1 gene UL15. Virus Res. 20:1991;97-104.
8. +T cells. Proc. Natl. Acad. Sci. USA. 87:1990;748-752.
9. Frenkel N., Rapaport D. Detection of human herpesviruses 6 and 7 by PCR. PCR: Protocols for Diagnosis of Human and Animal Virus Diseases. 1995;Springer. p. 243-251.
10. Frenkel N., Roffman E. Human herpesvirus 7. Fields B. N., Knipe D. M., Howley P. M. Fields Virology. 1996;2609-2622 Lippincott-Raven, Philadelphia.
11. Gibson W., Roizman B. Proteins specified by herpes simplex virus. VIII. Characterization and composition of multiple capsid forms of subtypes 1 and 2. J. Virol. 10:1972;1044-1052.
12. Gompels U. A., Nicholas J., Lawrence G., Jones M., Thomson B. J., Martin M. E. D., Efstathiou S., Craxton M., Macaulay H. A. The DNA sequence of human herpesvirus-6: Structure, coding content, and genome evolution. Virology. 209:1995;29-51.
13. Lawrence G. L., Chee M., Craxton M. A., Gompels U. A., Honess R. W., Barrell B. G. Human herpesvirus 6 is closely related to human cytomegalovirus. J. Virol. 64:1990;287-299.
14. McGeoch D. J., Cook S. Molecular phylogeny of the Alphaherpesvirinae subfamily and a proposed evolutionary timescale. J. Mol. Biol. 238:1994;9-22.
15. Nicholas J. Nucleotide sequence analysis of a 21-kbp region of the genome of human herpesvirus-6 containing homologues of human cytomegalovirus major immediate-early and replication genes. Virology. 204:1994;738-750.
16. Nicholas J. Determination and analysis of the complete nucleotide sequence of human herpesvirus 7. J. Virol. 70:1996;5975-5989.
17. Nicholas J., Martin M. E. D. Nucleotide sequence analysis of a 38.5-kilobase-pair region of the genome of human herpesvirus 6 encoding human cytomegalovirus immediate-early gene homologs and transactivating functions. J. Virol. 68:1994;597-610.
18. Okuno T., Takahashi K., Balachandra K., Shiraki K., Yamanishi K., Takahashi M., Baba K. Seroepidemiology of human herpesvirus 6 infection in normal children and adults. J. Clin. Microbiol. 27:1989;651-653.
19. Pfeiffer B., Thomson B., Chandran B. Identification and characterization of a cDNA derived from multiple splicing that encodes envelope glycoprotein gp105 of human herpesvirus 6. J. Virol. 69:1995;3490-3500.
20. Rawlinson W. D., Farrell H. E., Barrell B. G. Analysis of the complete DNA sequence of murine cytomegalovirus. J. Virol. 70:1996;8833-8849.
21. Roizman B., Carmichael L. E., Deinhardt F., de-The G., Nahmias A. J., Plowright W., Rapp F., Sheldrick P., Takahashi M., Wolf K. Herpesviridae: Definition, provisional nomenclature, and taxonomy. Intervirology. 16:1981;201-217.
22. Ruvulo V. R., Berneman Z., Seccheiro P., Nicholas J. Cloning, restriction endonuclease mapping and partial sequence analysis of the genome of human herpesvirus 7 strain JI. J. Gen. Virol. 77:1996;1901-1912.
23. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA. 74:1977;5463-5467.
24. Schiewe U., Neipel F., Schreiner D., Fleckenstein B. Structure and transcription of an immediate-early region in the human herpesvirus 6 genome. J. Virol. 68:1994;2978-2985.
25. Secchiero P., Nicholas J., Deng H., Xiaopeng T., van Loon N., Ruvulo V. R., Berneman Z. N., Reitz M. S. Jr., Dewhurst S. Identification of human telomeric repeat motifs at the genome termini of human herpesvirus 7: Structural analysis and heterogeneity. J. Virol. 69:1995;8041-8045.
26. Singer O., Frenkel N. Human herpesvirus 7 (HHV-7) DNA: Analyses of clones spanning the entire genome. Arch. Virol. 142:1997;287-303.
27. Staden R. Computer handling of DNA sequencing projects. Bishop M. J., Rawlings C. J. Nucleic Acid and Protein Sequence Analysis: A Practical Approach. 1987;173-217 IRL Press, Oxford.
28. Tanaka K., Kondo T., Torigoe S., Okada S., Mukai T., Yamanishi K. Human herpesvirus 7: Another causal agent for roseola (exanthem subitum). J. Pediatr. 125:1994;1-5.
29. van Loon N., Dykes C., Deng H., Dominguez G., Nicholas J., Dewhurst S. Identification and analysis of a lytic-phase origin of DNA replication in human herpesvirus 7. J. Virol. 71:1997;3279-3284.
30. Vlazny D. A., Kwong A., Frenkel N. Site-specific cleavage/packaging of herpes simplex virus DNA and the selective maturation of nucleocapsids containing full-length viral DNA. Proc. Natl. Acad. Sci. USA. 79:1982;1423-1427.
31. Wyatt L. S., Rodriguez W. J., Balachandran N., Frenkel N. Human herpesvirus 7: Antigenic properties and prevalence in children and adults. J. Virol. 65:1991;6260-6265.
32. Yamanishi K., Okuno T., Shiraki K., Takahashi M., Kondo T., Asano Y., Kurata T. Identification of human herpesvirus-6 as a causal agent for exanthem subitum. Lancet. i:1988;1065-1067.